prot_S-dermatodea_contig1357.2073.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1357.2073.1
Unique Nameprot_S-dermatodea_contig1357.2073.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length272
Homology
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: D7FV81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV81_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 2.440e-99
Identity = 162/247 (65.59%), Postives = 185/247 (74.90%), Query Frame = 0
Query:   43 DAKKAMEVQSIGPFENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKV-----GTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETVLVRTPAAKGT-------------SSGQARKKRKT 271
            +A+ AM  Q IGPFENHG C+L +VNVTATA+MKC I+L+ VV +ARNA+YNP+RFSACIIRLINK +P ATALVFKTGKVVVTG++S+ +VDY C  FA IL K+     G S KI F+   D +VQNMVATTDVGFPIRLEGLV    G FCNYEPELFPGLIYR++ PKIC LIFVSGKVVLTGAKSA+QLED FK MYP LC  KK TVL++T A   T             SS  ARKK KT
Sbjct:  112 EAQTAMRAQVIGPFENHGQCKLSMVNVTATADMKCTIDLKTVVMRARNAEYNPKRFSACIIRLINKNEPKATALVFKTGKVVVTGSRSNASVDYACKTFARILSKLDNGSGGPSHKINFDLERDRRVQNMVATTDVGFPIRLEGLVASNQGCFCNYEPELFPGLIYRMKDPKICFLIFVSGKVVLTGAKSAQQLEDGFKKMYPTLCQFKKATVLLQTSATARTANAAXXXXXXXXSSSEPARKKTKT 358          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: F0YMS8_AURAN (Uncharacterized protein GTF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMS8_AURAN)

HSP 1 Score: 192 bits (489), Expect = 5.480e-57
Identity = 106/205 (51.71%), Postives = 139/205 (67.80%), Query Frame = 0
Query:   55 PFENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETVL--VRTPAA 257
            P+ +  G  + + NV AT N++  I+LR +   ARNA+YNP++F+A I+R+    +P  TALVF TGK+V+TGAKS+DA       FA+I+ K+G   K       + KVQNMVAT+D GFPIRLE LV   H  F +YEPELFPGLIYRL +PK  +L+FVSG++VLTG KS   L  AF+ MYPVL   KKE++   VR+PAA
Sbjct:   39 PWSHPSGATIDVQNVVATVNLRISIDLRTLALNARNAEYNPKKFAAVIMRV---REPRCTALVFSTGKMVITGAKSEDAARRGARKFAAIIRKIGFQPKF-----GEFKVQNMVATSDAGFPIRLEALVYA-HAKFSSYEPELFPGLIYRLVIPKTVLLLFVSGRMVLTGGKSLGHLRTAFEKMYPVLTEFKKESLPYEVRSPAA 234          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A058ZD66_FONAL (Transcription initiation factor TFIID TATA-box-binding protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZD66_FONAL)

HSP 1 Score: 185 bits (470), Expect = 8.050e-55
Identity = 98/187 (52.41%), Postives = 129/187 (68.98%), Query Frame = 0
Query:   61 GCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKK 247
            G   +L N+ A+ N+ C + LRD+  KARNA+YNPRRFSA I+R+    +P  TALVF +GK+VVTGAKS++   +    F  I+ K G   K+ FN   D  +QN+V + DV FPIRLEGL Q  HG   NY+PELFPGLI+R+  PK+ +LIFVSGK+VLTGAK  +++E AF+ +YPVL   KK
Sbjct:   43 GIRPQLQNIVASLNLNCALQLRDIATKARNAEYNPRRFSAVIMRI---REPKTTALVFASGKMVVTGAKSENESQFAARKFMRIIQKCGF--KVDFN---DFTIQNVVGSCDVRFPIRLEGL-QNTHGSSSNYDPELFPGLIFRMHDPKVVLLIFVSGKIVLTGAKRCEEIEQAFERIYPVLLEYKK 220          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: UPI000023525A (TF22_MAIZE Transcription initiation factor TFIID-2 (TATA-box factor 2) (TATA sequence-binding protein 2) (TBP-2) n=1 Tax=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) TaxID=227321 RepID=UPI000023525A)

HSP 1 Score: 184 bits (466), Expect = 2.370e-54
Identity = 99/195 (50.77%), Postives = 133/195 (68.21%), Query Frame = 0
Query:   66 LVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETVLVRTPAAKGT 260
            L N+ AT N+ C ++L+ +   ARNA+YNP+RF+A I+R+    +P  TAL+F +GK+VVTGAKS+D        +A I+ K+G + K       D K+QN+V + D+ FPIRLEGL   RH  F +YEPELFPGLIYR+  PKI +LIFVSGK+VLTGAK  +++  AF+ +YPVL S K  T  +RTPA  GT
Sbjct:   22 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRI---REPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFT-----DFKIQNIVGSCDIKFPIRLEGLAS-RHHNFSSYEPELFPGLIYRMMKPKIVLLIFVSGKIVLTGAKVREEIYQAFELIYPVL-SGKLPTFDIRTPANFGT 206          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A6A4VTJ8_AMPAM (TATA-box-binding protein n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VTJ8_AMPAM)

HSP 1 Score: 185 bits (470), Expect = 7.330e-54
Identity = 100/196 (51.02%), Postives = 131/196 (66.84%), Query Frame = 0
Query:   53 IGPFENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKE 248
            + P  N  G   +L N+ +T NM C ++LR +  +ARNA+YNP+RF+A I+R+    +P  TAL+F +GK+V TGAKS+D        +A I+ K+G   K       D KVQNMV + DV FPIRLEGLV   H  F +YEPELFPGLIYR+  P+I +LIFVSGKVVLTGAK  +Q+ DAF  +YP+L S KK+
Sbjct:  110 LNPASNDPGIVPQLQNIVSTINMLCKLDLRKIAMQARNAEYNPKRFAAVIMRI---REPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFDAKFA-----DFKVQNMVGSCDVKFPIRLEGLVL-THNQFSSYEPELFPGLIYRMVQPRIVLLIFVSGKVVLTGAKVRQQIYDAFDNIYPILRSYKKQ 296          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A5C5G0V3_9BASI (Uncharacterized protein (Fragment) n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G0V3_9BASI)

HSP 1 Score: 181 bits (458), Expect = 1.160e-53
Identity = 93/175 (53.14%), Postives = 122/175 (69.71%), Query Frame = 0
Query:   68 NVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVL 242
            N+ AT N++C ++L+ +   ARNA+YNP+RF+A I+R+    +P  TALVF +GKVVVTGAKS+D        FA I+ K+G   K       D K+QN+V + DV FPIRLEGL  G HG F +YEPELFPGLIYR+  PK+ +LIFVSGK+VLTGAK  +++  AF  +YPVL
Sbjct:    2 NIVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRI---REPKTTALVFASGKVVVTGAKSEDDSRLAARKFARIIQKLGFETKFT-----DFKIQNIVGSCDVKFPIRLEGLAYG-HGHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKFREEIYQAFAAIYPVL 167          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A1D2AC59_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AC59_AUXPR)

HSP 1 Score: 182 bits (461), Expect = 2.470e-53
Identity = 97/192 (50.52%), Postives = 132/192 (68.75%), Query Frame = 0
Query:   65 RLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETVLVRTPA 256
            +L NV AT N++C ++L+D+  +ARNA+YNP+RF+A I+R+    +P +TAL+F +GK+V TGAKS+         +A IL K+     ++F    + K+QNMV + DV FPIRLEGL    H  FC+YEPELFPGLIYR+  PKI +LIFVSGKVVLTGAK  +++  AF+ +YPVL   KK  +L   PA
Sbjct:   25 QLQNVVATVNLECKLDLKDIALRARNAEYNPKRFAAVIMRI---REPKSTALIFASGKMVCTGAKSEQESRLAARKYARILQKL--ENPVIFK---EFKIQNMVGSCDVRFPIRLEGLASS-HSVFCSYEPELFPGLIYRMVDPKIVLLIFVSGKVVLTGAKRREEIYQAFENIYPVLKEFKKGGLLESVPA 207          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A8D8LLC4_9HEMI (TATA-box-binding protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8LLC4_9HEMI)

HSP 1 Score: 183 bits (465), Expect = 3.780e-53
Identity = 95/192 (49.48%), Postives = 133/192 (69.27%), Query Frame = 0
Query:   57 ENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKE 248
            ++ GG   +L N+ +T N+ C ++L+ +   ARNA+YNP+RF+A I+R+    +P  TAL+F +GK+V TGAKS++        +A I+ K+G   K +     D K+QNMV + DV FPIRLEGLV   HG F +YEPELFPGLIYR+  P+I +LIFVSGKVVLTGAK  +++ +AF C+YP+L S KK+
Sbjct:  111 QDMGGIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRI---REPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFL-----DFKIQNMVGSCDVKFPIRLEGLVL-THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYEAFDCIYPILKSFKKQ 293          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A2G2YW92_CAPAN (TATA-box-binding protein n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2YW92_CAPAN)

HSP 1 Score: 180 bits (456), Expect = 3.960e-53
Identity = 90/185 (48.65%), Postives = 127/185 (68.65%), Query Frame = 0
Query:   66 LVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETV 250
            L N+ +T N+ C ++L+ +  +A+NA+YNP+RF A I+R+    +P  TAL+F TGKVVVTGAK++    Y    +A I+ K+G    + F    D K+QN+VA+ DVGFPIRLEGL    HG F +YEPE+FPGLIYR++ PKI +L+F SGK+V+TGAK  + +  AF  +YPVL    K+T+
Sbjct:   13 LQNIASTVNLDCKLDLKGIALQAQNAEYNPKRFPAVIMRV---KEPKTTALIFATGKVVVTGAKNEGDAKYAARKYARIVQKIGCHLGVKFK---DFKIQNIVASCDVGFPIRLEGLALA-HGAFSSYEPEIFPGLIYRMKQPKIVMLVFTSGKIVITGAKVREDIYTAFDSIYPVLTQFSKKTL 190          
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Match: A0A8I6RJL8_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RJL8_CIMLE)

HSP 1 Score: 182 bits (463), Expect = 8.200e-53
Identity = 97/194 (50.00%), Postives = 131/194 (67.53%), Query Frame = 0
Query:   55 PFENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSACIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGTSQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPGLIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKE 248
            P  +  G   +L N+ +T N+ C ++L+ +   ARNA+YNP+RF+A IIR+    +P  TAL+F +GK+V TGAKS+D        +A I+ K+G   K +     D KVQNMV + DV FPIRLEGLV   HG F +YEPELFPGLIYR+  P+I +LIFVSGKVVLTGAK  +++ +AF  +YP+L S KK+
Sbjct:  112 PTSSEPGITPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIIRI---REPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARIIQKLGFQAKFL-----DFKVQNMVGSCDVKFPIRLEGLVL-THGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVCREIYEAFDNIYPILKSFKKQ 296          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1357.2073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV81_ECTSI2.440e-9965.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YMS8_AURAN5.480e-5751.71Uncharacterized protein GTF n=1 Tax=Aureococcus an... [more]
A0A058ZD66_FONAL8.050e-5552.41Transcription initiation factor TFIID TATA-box-bin... [more]
UPI000023525A2.370e-5450.77TF22_MAIZE Transcription initiation factor TFIID-2... [more]
A0A6A4VTJ8_AMPAM7.330e-5451.02TATA-box-binding protein n=3 Tax=Amphibalanus amph... [more]
A0A5C5G0V3_9BASI1.160e-5353.14Uncharacterized protein (Fragment) n=1 Tax=Rhodoto... [more]
A0A1D2AC59_AUXPR2.470e-5350.52Uncharacterized protein n=3 Tax=Auxenochlorella pr... [more]
A0A8D8LLC4_9HEMI3.780e-5349.48TATA-box-binding protein n=1 Tax=Cacopsylla melano... [more]
A0A2G2YW92_CAPAN3.960e-5348.65TATA-box-binding protein n=4 Tax=Capsicum TaxID=40... [more]
A0A8I6RJL8_CIMLE8.200e-5350.00Uncharacterized protein n=1 Tax=Cimex lectularius ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 66..81
score: 35.64
coord: 164..180
score: 61.45
coord: 189..204
score: 78.06
coord: 208..224
score: 75.47
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 161..243
e-value: 1.3E-29
score: 101.9
coord: 64..147
e-value: 9.4E-24
score: 83.2
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 19..247
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 68..243
e-value: 3.5E-59
score: 201.2
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 71..164
e-value: 3.5E-59
score: 201.2
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 19..247
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 61..151
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 160..249
IPR030491TATA-box binding protein, conserved sitePROSITEPS00351TFIIDcoord: 193..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1357contigS-dermatodea_contig1357:12780..16165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1357.2073.1mRNA_S-dermatodea_contig1357.2073.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1357 11776..16459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1357.2073.1 ID=prot_S-dermatodea_contig1357.2073.1|Name=mRNA_S-dermatodea_contig1357.2073.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=272bp
MSQASTKDAVGSSSGPGSGSGSGSGSGSGSNPEVVCRSGKTVDAKKAMEV
QSIGPFENHGGCELRLVNVTATANMKCPINLRDVVAKARNAQYNPRRFSA
CIIRLINKGKPTATALVFKTGKVVVTGAKSDDAVDYVCSGFASILDKVGT
SQKIVFNPRDDVKVQNMVATTDVGFPIRLEGLVQGRHGPFCNYEPELFPG
LIYRLQVPKICVLIFVSGKVVLTGAKSAKQLEDAFKCMYPVLCSAKKETV
LVRTPAAKGTSSGQARKKRKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
IPR030491TBP_CS