prot_S-dermatodea_contig13501.2043.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13501.2043.1
Unique Nameprot_S-dermatodea_contig13501.2043.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length431
Homology
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BLAST of mRNA_S-dermatodea_contig13501.2043.1 vs. uniprot
Match: A0A6H5KYE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE6_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 6.990e-37
Identity = 128/360 (35.56%), Postives = 143/360 (39.72%), Query Frame = 0 
Query:   88 LADLDAWMVILRALSLGASSRQKEVGMHALQLLTKAMLDGQAEKAPPEVLQAVMLTIVFPLGSRVWHRESRDM---GWGSSRWRRPQGSISRASSGRGSHTAEDDRWPPDLTDDGFELVEAPDVGPSPEPGLPHPTATEPAVGAGSSSAMRRQFSGEGGVWDDGKLEGEDSGRASAAGRGDD------------------------------------GGVQLSSPALLALLLVFKSFLKHLSSLRRSGGFFEVWRGFLCCIETLLASEGSAPPALVDGAVTGLGAVLGEMHREGMFALNEDDAAGNDA---------------------VEARTWAFTRAKVPGFGCCPGLLSDIFEVG 387
            L   DAWM+ILRALSLGA S    V  HALQLLTK MLD  A +APP+VLQ  ML++V PL    W R +RD    G  S R                                                                                                                                        G  Q+SS ALLALLL+ KSFLKHLS+LRR   F EVW  FLCC+E LL +EG+APP LVDGAVTGLGAV+GEM  EG+FA     AA  DA                     VE   WAFTRAKVP FGCCP LL  +FE G
Sbjct:  114 LVATDAWMMILRALSLGAGSEDLMVASHALQLLTKVMLDDLAAEAPPDVLQDAMLSVVLPLARHAWRRVARDTAARGGTSPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSRQVSSLALLALLLMLKSFLKHLSALRRGDQFCEVWCQFLCCLEILLGTEGNAPPTLVDGAVTGLGAVVGEMIGEGLFAFAVAAAATADAASPAGQRTGDGGAGQRHSGGEVEEAVWAFTRAKVPQFGCCPDLLRRVFEEG 473
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BLAST of mRNA_S-dermatodea_contig13501.2043.1 vs. uniprot
Match: D8LRA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA4_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.400e-26
Identity = 59/82 (71.95%), Postives = 67/82 (81.71%), Query Frame = 0 
Query:  265 DDGGVQLSSPALLALLLVFKSFLKHLSSLRRSGGFFEVWRGFLCCIETLLASEGSAPPALVDGAVTGLGAVLGEMHREGMFA 346
            D G   +SSPALLALLL+ KSFLKHLS+LRR   F EVWR FLCC+E LL +EG+APP LVDGAVTGLGAV+GEM  EG+FA
Sbjct:   68 DVGSRPVSSPALLALLLMLKSFLKHLSALRRGDRFCEVWRQFLCCLEILLGTEGNAPPTLVDGAVTGLGAVVGEMIGEGLFA 149
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13501.2043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYE6_9PHAE6.990e-3735.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRA4_ECTSI2.400e-2671.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13501contigS-dermatodea_contig13501:2356..4975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13501.2043.1mRNA_S-dermatodea_contig13501.2043.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13501 2026..5136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13501.2043.1 ID=prot_S-dermatodea_contig13501.2043.1|Name=mRNA_S-dermatodea_contig13501.2043.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=431bp
MVLHARIPSNYGSKSNPISGTGVSEKIEGAAAAPVPAAKGREETAAPLTT
AAKMLSATAVSPRSQAETVGVDDLNRRDGREKVGGSRLADLDAWMVILRA
LSLGASSRQKEVGMHALQLLTKAMLDGQAEKAPPEVLQAVMLTIVFPLGS
RVWHRESRDMGWGSSRWRRPQGSISRASSGRGSHTAEDDRWPPDLTDDGF
ELVEAPDVGPSPEPGLPHPTATEPAVGAGSSSAMRRQFSGEGGVWDDGKL
EGEDSGRASAAGRGDDGGVQLSSPALLALLLVFKSFLKHLSSLRRSGGFF
EVWRGFLCCIETLLASEGSAPPALVDGAVTGLGAVLGEMHREGMFALNED
DAAGNDAVEARTWAFTRAKVPGFGCCPGLLSDIFEVGGGVTPPSGGVAAV
SVAARSDGGDTGTAVEFRVGCAEQDGGGAP*
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