prot_S-dermatodea_contig13254.1935.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13254.1935.1
Unique Nameprot_S-dermatodea_contig13254.1935.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length141
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig13254.1935.1 vs. uniprot
Match: D7FLU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU5_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.830e-22
Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 0 
Query:   19 EETRYVDSTITHLGDPIGGCYEVSTGLLNGFPVYMLGGAELVKGTSWLYVTFEGTWHIVMIIGLDADTGYVSQMDTICSATDYQADEL----TGPTDPLLDGGWLC 120
            E+T +VDS IT+LG PIGGCY+++T LL GFP Y LGG     G +W+YV+  G+W I  +  +D  TG VS +  +C++    A +      GPT   LDG W C
Sbjct:   61 EDTVFVDSLITNLGYPIGGCYDMATTLLRGFPFYALGGGA-AAGDAWIYVSTAGSWEIGTVDEVDDSTGGVSSLSAVCTSEGLLAADFPEGDNGPTSSQLDGAWQC 165
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13254.1935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLU5_ECTSI1.830e-2244.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13254contigS-dermatodea_contig13254:3086..4781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13254.1935.1mRNA_S-dermatodea_contig13254.1935.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13254 3086..4783 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13254.1935.1 ID=prot_S-dermatodea_contig13254.1935.1|Name=mRNA_S-dermatodea_contig13254.1935.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=141bp
RFPPACLTLVPTRLFGKQEETRYVDSTITHLGDPIGGCYEVSTGLLNGFP
VYMLGGAELVKGTSWLYVTFEGTWHIVMIIGLDADTGYVSQMDTICSATD
YQADELTGPTDPLLDGGWLCSYFQDGVTNYEVAADFKEVEC
back to top