prot_S-dermatodea_contig13025.1831.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13025.1831.1
Unique Nameprot_S-dermatodea_contig13025.1831.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length106
Homology
BLAST of mRNA_S-dermatodea_contig13025.1831.1 vs. uniprot
Match: A0A836CFA8_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFA8_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.680e-31
Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 0
Query:    2 PAVPIYFFEPGASESLASKLEENTSEVQEVAENLFYLGRGGIKTVGKLTVAFLGSNHKPEDMDNCRKVSAMGGYGGADILLSSEWGRGMEVDLPERCFEELRAAG 106
            P +P YFFEPG S  LA  L+++ ++VQE+A +LFYLGRGGI+TVGKLTVAFL   H PED++  R  +  GGY GAD+LL+SEW RG + DLP+     L++ G
Sbjct:   67 PPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVG 171          
BLAST of mRNA_S-dermatodea_contig13025.1831.1 vs. uniprot
Match: A0A6H5KVH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 7.020e-28
Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 0
Query:    1 PPAVPIYFFEPGASESLASKLEENTSEVQEVAENLFYLGRGGIKTVGKLTVAFLGSNHKPEDMDNCRKVSAMGGYGGADILLSSEWGRGMEVDLPERCFEELRAAG 106
            PPAVP+YFFE G SESL++KLEE+    Q+VA NLFYLGRGGIKTVGKLTVAFL ++HKP+ ++                       +GMEVDLPERCF+EL A G
Sbjct:   63 PPAVPVYFFEAGGSESLSAKLEEHP--FQQVASNLFYLGRGGIKTVGKLTVAFLSTSHKPDGVE----------------------AKGMEVDLPERCFQELSAGG 144          
BLAST of mRNA_S-dermatodea_contig13025.1831.1 vs. uniprot
Match: D8LD91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD91_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.180e-22
Identity = 55/105 (52.38%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 PPAVPIYFFEPGASESLASKLEENTSEVQEVAENLFYLGRGGIKTVGKLTVAFLGSNHKPEDMDNCRKVSAMGGYGGADILLSSEWGRGMEVDLPERCFEELRAA 105
            PPAVP+YFFE G SESL++KLEE+            YL                         ++CRKVSAM GYGGAD+LLS+EWGRGMEVDLPERCF+EL AA
Sbjct:   30 PPAVPVYFFEAGGSESLSAKLEEHP-----------YL-------------------------ESCRKVSAMAGYGGADLLLSTEWGRGMEVDLPERCFQELSAA 98          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13025.1831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CFA8_9STRA5.680e-3155.24CwfJ C-terminus 1-domain-containing protein-like p... [more]
A0A6H5KVH2_9PHAE7.020e-2856.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD91_ECTSI3.180e-2252.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13025contigS-dermatodea_contig13025:1297..4363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13025.1831.1mRNA_S-dermatodea_contig13025.1831.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13025 1297..4363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13025.1831.1 ID=prot_S-dermatodea_contig13025.1831.1|Name=mRNA_S-dermatodea_contig13025.1831.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=106bp
PPAVPIYFFEPGASESLASKLEENTSEVQEVAENLFYLGRGGIKTVGKLT
VAFLGSNHKPEDMDNCRKVSAMGGYGGADILLSSEWGRGMEVDLPERCFE
ELRAAG
back to top