prot_S-dermatodea_contig1298.1807.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1298.1807.1
Unique Nameprot_S-dermatodea_contig1298.1807.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length301
Homology
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 1.450e-94
Identity = 161/265 (60.75%), Postives = 189/265 (71.32%), Query Frame = 0
Query:   38 RTTTTT---RRPCSGGR------SKPETKPPPTGPSASAKEPAPRASLFSVFLGRYTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPP---NKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLAPD 290
            R TTT+   RR C GG       +K   +PPPTG     K    RAS+FS+    Y +LLESRPLATKA+TSG IAF GD+SCQL+++++AK E+     QH        P      + VA++IDWGR  RFTF+GAA +APALH WYGFLIR LPGTA  TVVKRVALDQL+F PVFLA FLST+M+LDGNAAKI +KLRADY TT+V NWGYWIP Q+INFRFV PVYQVL+AN +GFFWN+YLSYQSNKAV      P A D
Sbjct:   24 RATTTSALPRRQCCGGSGTRSASTKVPAQPPPTGAPKPTKPT--RASIFSM----YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAVLKDMEHPAAVD 282          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 1.100e-89
Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 0
Query:   84 YTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPP---NKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAV 279
            Y +LLESRPLATKA+TSG IAF GD+SCQL+++++AK E+     Q    L    P        VA++IDWGR  RFTF+GAA +APALH WYGFLI+ LPGTA  TVVKRVALDQL+F P FLA FLST+M+LDGNAAKI +KLRADYTTTLV NWGYWIP Q+INFRFV PVYQVL+AN +GFFWN+YLSYQSNKAV
Sbjct:    2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 200          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.700e-53
Identity = 104/230 (45.22%), Postives = 130/230 (56.52%), Query Frame = 0
Query:   62 GPSASAKEPAPRASLFSVFLGRYTALLESRPLATKAITSGVIAFGGDISCQLISVQ-IAKGEDYAEEHQHELGLASPPPNKVSFVAA-DIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLAP 289
            G  + A +P    S     +  Y+ LLE+ P+ATKA+TS  IA  GDI CQ+ + + +A     A E     G A       S      +DW RCARF  L  A  APA H WYG L R LPG  +    KR+ALDQ VF+PVF+  F S +MVL+G AA+I  KLR DY TTLV NW  W+P Q+ NFR V   YQV  ANC+G FWN YLS+QS K ++ +      P
Sbjct:   29 GLKSEAVQPGAAESRSINIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQIYTNRGLAAAAAGAGEAGSNAGAADGAATWGSTSQQRHLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKIKSAPQSQPEP 258          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.590e-49
Identity = 102/229 (44.54%), Postives = 134/229 (58.52%), Query Frame = 0
Query:   81 LGRYTALLESRPLATKAITSGVIAFGGDISCQLISV-----QIAKGE-DYAEEHQH--------------ELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPG-TAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLA 288
            L RY+ALL SRPL TK +T+ +IA  GD++CQL +      + A+GE D    H H              E G+A    ++  + A D+   R  +F  L AA  AP+ HYWY  L + + G TA+   VKR+ALDQ +F PVF+  F S +MV++G AAKI QKL+ DY  TLV NWG W+P Q+INFR V   YQVL+AN +GFFWN  +S Q  K   D    P+A
Sbjct:   25 LDRYSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGMAKRQQHRDWWGAVDLK--RTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPVA 251          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A662Y1B5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1B5_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.190e-45
Identity = 90/216 (41.67%), Postives = 115/216 (53.24%), Query Frame = 0
Query:   84 YTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAAD----IDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLAPDGKHLT 295
            Y  LLE+ PL+TK +T G IA  GD+SCQL                              F+ AD     D  R A FTFLG A ++P LH WYGFL + +PG +   +VKR+ALDQLVF P FL  F S+++ L+G+  ++ +KLRAD+      NW  W+P QIINFRFV    QVLFAN +G  WN YLSY  +     S     A +    T
Sbjct:   42 YATLLETHPLSTKIVTGGAIAGAGDVSCQL------------------------------FIEADDNGKFDVKRAAIFTFLGGALISPVLHVWYGFLGKLVPGVSSRAIVKRLALDQLVFAPTFLCVFFSSLLTLEGHLDQLPEKLRADWWPATKANWAVWVPAQIINFRFVPGSLQVLFANVVGLVWNSYLSYIGHLEAPSSKLEASASEANAAT 227          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 159 bits (401), Expect = 4.720e-44
Identity = 86/210 (40.95%), Postives = 116/210 (55.24%), Query Frame = 0
Query:   83 RYTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLAPDGK 292
            +Y  LLE+ PL TK IT+G IA   D++CQ   V     ED                NK   +   +DW R   FT +      P  HYWYGFL   + GT     +KRV LDQ++F PV LASF S +++++G + +I  KLR D  TT++ N+  WIP Q+INF+FV   Y+VL+AN +GFFWN+YLSY +      SA      +GK
Sbjct:   34 QYNKLLETHPLMTKCITAGAIAAVADVTCQ---VSFPSDED---------------ANKS--LLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSYAAVNGTSSSAGDTEKKEGK 223          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A7S4M7U8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7U8_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.170e-42
Identity = 82/206 (39.81%), Postives = 122/206 (59.22%), Query Frame = 0
Query:   74 ASLFSVFLGRYTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNA-AKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKA 278
            +S F   L  Y+ +L++ P+ATK +TSG IA  GD  CQ +  +  KG     + + +   A   PN +          R  RFTFLG AF+APA+H WYG L+   PG +   V+KR+ LDQ  F P+F+ +F+  +M L+G   A++  KL++DY  T++ NW  W+P Q++NFRF+   +QVLF N +GF WN Y S+++  A
Sbjct:   95 SSFFKQALAWYSHILDTHPIATKCLTSGFIAGSGDFLCQYLVFRNTKGVSGISKPEKD---AKFEPNML----------RTGRFTFLGFAFVAPAVHLWYGRLVMHFPGNSPAQVLKRLVLDQCFFAPLFVPAFMVNLMALEGRPLAEMPGKLKSDYFDTMITNWCLWVPAQLVNFRFIPLKFQVLFGNGIGFIWNTYFSWKTQDA 287          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A484DWD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWD7_BRELC)

HSP 1 Score: 154 bits (388), Expect = 5.170e-42
Identity = 85/196 (43.37%), Postives = 111/196 (56.63%), Query Frame = 0
Query:   84 YTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAV 279
            Y +LL + PL+TK +T G IA  GDI CQ++     +GE                        A  D  R A FTFLG   ++P LH WYGFL   LPG +  T+ KR+ LDQ++F PVFL+ FLS++  L+G+A  I  KLRAD+      NW  W+P QIINFRFV    QVLF+N +G  WN YLS+ S+  +
Sbjct:   45 YASLLVTHPLSTKIVTGGTIAGLGDIGCQVL----LEGERKD---------------------AKFDLKRTAIFTFLGGVAVSPILHVWYGFLGSRLPGISKATITKRLVLDQIIFAPVFLSIFLSSVQALEGHADDIQDKLRADWWPLTKANWVIWVPAQIINFRFVPATMQVLFSNVMGLVWNSYLSFVSHSEI 215          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A0L0G5N4_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5N4_9EUKA)

HSP 1 Score: 152 bits (385), Expect = 1.330e-41
Identity = 88/201 (43.78%), Postives = 112/201 (55.72%), Query Frame = 0
Query:   84 YTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAA 284
            Y   LE+ PL TKA++SGVIA  GDI CQ+               +++   ++   NK S    +  W R   F+ LG  +L PALH WY  L R LPGT    V KR+A DQ VF PVF+ SF+S  ++L G  A + +KL   +  T+  NW  WIP Q INF FV P  QVLFANC+G  W+VYLS  SN     +AA
Sbjct:   43 YMRWLETYPLKTKALSSGVIAGLGDILCQV-------------GFENKSMFSAGDGNKGS----EFGWRRFFVFSALGGLYLGPALHMWYRVLGRVLPGTTQLAVAKRLAADQFVFAPVFIPSFMSLTLILQGKIADVPKKLADAWWPTVKANWAVWIPAQYINFSFVSPNLQVLFANCVGLVWHVYLSKVSNNDNTPAAA 226          
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Match: A0A225WCL6_9STRA (Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WCL6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 6.180e-41
Identity = 83/196 (42.35%), Postives = 108/196 (55.10%), Query Frame = 0
Query:   84 YTALLESRPLATKAITSGVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADIDWGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFTPVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRFVGPVYQVLFANCLGFFWNVYLSYQSNKAV 279
            Y +LL + PL+TK  T G IA  GD+ CQL+     +G+                           D  R A FT LG   ++P LH WYGFL   + G A   V+KR+ALDQL F P+FL  FLS+++ L+G+A  I  KLR D+ +    NWG W+P QI+NFRFV    QVLF+N +G  WN YLSY S+  V
Sbjct:   18 YASLLGTHPLSTKIATGGAIAGLGDVGCQLL----LEGDKR------------------------FDGKRTAIFTILGGFLISPVLHVWYGFLGSRVSGVATSAVMKRLALDQLGFAPIFLPVFLSSVLTLEGHAYDIPDKLRVDWWSVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHSTV 185          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1298.1807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL95_9PHAE1.450e-9460.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI1.100e-8968.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNC4_9STRA1.700e-5345.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKC9_9STRA3.590e-4944.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662Y1B5_9STRA6.190e-4541.67Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A4Q2YFM0_9BACT4.720e-4440.95Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A7S4M7U8_9STRA1.170e-4239.81Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A484DWD7_BRELC5.170e-4243.37Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0L0G5N4_9EUKA1.330e-4143.78Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A225WCL6_9STRA6.180e-4142.35Protein Mpv17 n=1 Tax=Phytophthora megakarya TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 216..272
e-value: 3.7E-19
score: 68.7
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 75..280
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 75..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..216
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 245..267
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1298contigS-dermatodea_contig1298:14285..16986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1298.1807.1mRNA_S-dermatodea_contig1298.1807.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1298 14198..18315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1298.1807.1 ID=prot_S-dermatodea_contig1298.1807.1|Name=mRNA_S-dermatodea_contig1298.1807.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=301bp
MLLGAGSRRASPLLCSAARVGRASLPRTRYRTTQPVPRTTTTTRRPCSGG
RSKPETKPPPTGPSASAKEPAPRASLFSVFLGRYTALLESRPLATKAITS
GVIAFGGDISCQLISVQIAKGEDYAEEHQHELGLASPPPNKVSFVAADID
WGRCARFTFLGAAFLAPALHYWYGFLIRTLPGTAVFTVVKRVALDQLVFT
PVFLASFLSTIMVLDGNAAKITQKLRADYTTTLVGNWGYWIPGQIINFRF
VGPVYQVLFANCLGFFWNVYLSYQSNKAVEDSAAGPLAPDGKHLTSNESE
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22