prot_S-dermatodea_contig12907.1769.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12907.1769.1
Unique Nameprot_S-dermatodea_contig12907.1769.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length157
Homology
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: D7FIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIV7_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 2.830e-60
Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    4 GLADDVDATLAECSLKLGDGPGAANMYMQVLERTEEKHVEALVGYGKLAILVNQVDKGVQSLLKAIITDQGHKETRKVMAQALGMPVGMATLRQQVAPTPDSASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGHEIAGDY 156
            GL DD DA LA C  K+GD PGA NMYM+VL+RT EKH+E+LVGYG+LA+L  Q DKGV SLL+AI++DQ +KETRKV+A +LG+P GM   + QV P+ +++SVYSFL+TV KD+GEI+AS++LL+VAASIDP NAS ALGLVHGHEI  DY
Sbjct:  265 GLVDDADAALAFCRFKMGDAPGAGNMYMEVLQRTGEKHIESLVGYGRLALLFKQTDKGVPSLLRAIMSDQDNKETRKVLAGSLGIPEGMKAFKAQVVPSKETSSVYSFLATVTKDYGEIDASVQLLEVAASIDPTNASCALGLVHGHEIRADY 417          
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: A0A835ZAX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 6.570e-20
Identity = 65/185 (35.14%), Postives = 90/185 (48.65%), Query Frame = 0
Query:    6 ADDVDATLAECSLKLGDGPGAANMYMQVLERT--------EEKHVEALVGYGKLAILVNQVDKGVQSLLKAIIT-DQGHKETRKVMAQALGMPVGMATLRQQVAPTPDS----------------------------ASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGHEIA 153
            A+D+D  L  C+L  G   G A+++  VLERT        E++H  ALVGY  LA+   Q    V  L++ + T DQ HKE R+++A AL +P GM  L   + P  DS                            ASVY+FL +V KDH +++A+  L   A +  P NA+ AL L H  E A
Sbjct:  342 AEDIDTELGWCNLHSGRLQGGADLFQAVLERTQQAVLERMEQRHTGALVGYATLALASGQAAAAVSPLVRVVATTDQKHKELRQLIAAALALPAGMEALLAMLPPASDSTVHIRTXXXXXXXXXXXXSASVCAFLGIASVYAFLGSVVKDHSKLDAAAVLFCNALAQAPANAAYALSLAHCLEAA 526          
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: A0A7S4A4Z0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4Z0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.670e-20
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 0
Query:    5 LADDVDATLAECSLKLGDGPGAANMYMQVLERTEEKHVEALVGYGKLAILVNQVDKGVQSLLKAIITDQGHKETRKVMAQALGMPVGMATLRQQVAPTPDS-ASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGHEIAGDY 156
            L +D    LA   L  G G  A      VL++  + H  A V Y ++A   ++ D+ +  +L+A++ DQ +K+ R+  A A+    G   LR+Q+A   DS A+  +FL+TVCKDHG +E S ELL+ AA   P +AS AL L+H  EI  DY
Sbjct:  203 LMEDAGVELARAQLSEGRGQEACATCELVLKKNPQ-HCGATVAYSQVARAFHKKDEELSLILRAVVMDQENKDARRGAALAISDEGGFDRLRKQLADPRDSPAAAVAFLATVCKDHGRVEVSAELLQWAADDVPSSASYALNLLHAREILNDY 354          
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: D7G1Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q8_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 6.570e-15
Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   20 LGDGPGAANMYMQVLERTEEKHVEALVGYGKLAILVNQVDKGVQSLLKAIITDQ----GHKETRKVMAQALGMPVGMAT 94
            +GD  GA N+YM VL RT EKH+E+LVGYG+LA++ NQ DKGV SLL+AI+T Q    G   T  V   A     G AT
Sbjct:    1 MGDALGARNVYMAVLRRTGEKHIESLVGYGRLALMSNQADKGVSSLLRAIMTAQMPWCGAVWTHDVQPAADSTAAGEAT 79          
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: UPI000644823E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644823E)

HSP 1 Score: 57.8 bits (138), Expect = 8.700e-7
Identity = 36/130 (27.69%), Postives = 72/130 (55.38%), Query Frame = 0
Query:   34 LERTEEKHVEALVGYGKLAILVNQVDKGVQSLLKAIITDQGHKETRKVMA----QALG---MPVGMATLRQQVAPTPDSASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGHEIAGDY 156
            ++ T+E +++ L+G+  + ++ N+       +L  +++  G+   R  +A    +AL       G   +  Q+  T ++A V +F+S+V K++G IEAS++ +K A  +DP NA+ A  ++HG E+   Y
Sbjct:  304 VKNTDEGNLQGLIGFAYV-LIDNKRHNDALLVLMQLLSRMGNSGDRNPVANYTKEALADYAREFGAQQILVQLKDTLNTAPVLAFMSSVVKEYGAIEASVDFMKQALQMDPTNANYAHNVLHGLEVCNKY 432          
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Match: A0A061S9Z0_9CHLO (Tpr-like protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S9Z0_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 9.100e-6
Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   59 DKGVQSLLKAIITDQGHKETRKVMAQALGMPVGMATLRQQVAPTPDSASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGHEI 152
            +  ++ LL+ ++     KE R+ +A+A+  P  +  +  ++     +A+  +FL+T  KDHG IEA+IEL + A S+ P   S AL L+H  E+
Sbjct:    3 EDAIRVLLRLLVDRPKSKEVRRSLAEAVSKPGMLDAMVSELTGEAYTAAALAFLATCVKDHGAIEAAIELFRRADSLSPC-PSYALNLIHTEEL 95          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12907.1769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FIV7_ECTSI2.830e-6066.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZAX8_9STRA6.570e-2035.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A4Z0_9STRA8.670e-2038.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7G1Q8_ECTSI6.570e-1553.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000644823E8.700e-727.69hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A061S9Z0_9CHLO9.100e-632.98Tpr-like protein n=2 Tax=Tetraselmis sp. GSL018 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..157
e-value: 1.0E-10
score: 43.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 13..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12907contigS-dermatodea_contig12907:1628..5315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12907.1769.1mRNA_S-dermatodea_contig12907.1769.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12907 1627..5315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12907.1769.1 ID=prot_S-dermatodea_contig12907.1769.1|Name=mRNA_S-dermatodea_contig12907.1769.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=157bp
ATRGLADDVDATLAECSLKLGDGPGAANMYMQVLERTEEKHVEALVGYGK
LAILVNQVDKGVQSLLKAIITDQGHKETRKVMAQALGMPVGMATLRQQVA
PTPDSASVYSFLSTVCKDHGEIEASIELLKVAASIDPRNASSALGLVHGH
EIAGDYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf