prot_S-dermatodea_contig12697.1656.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12697.1656.1
Unique Nameprot_S-dermatodea_contig12697.1656.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length110
Homology
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BLAST of mRNA_S-dermatodea_contig12697.1656.1 vs. uniprot
Match: A0A6H5K792_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K792_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.270e-11
Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0 
Query:   25 MVAMKRKRPGQEYGEDEKLLHQATKAFTKETKRVKTFLLQQAIRKRKS 72
            MVAMKRKR GQ Y +DEKL HQATKA TKE KRVKTFLLQQAIR+ K+
Sbjct:    1 MVAMKRKRAGQGYDDDEKLRHQATKALTKEAKRVKTFLLQQAIRRSKA 48
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12697.1656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K792_9PHAE1.270e-1179.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.832

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12697contigS-dermatodea_contig12697:1154..3773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12697.1656.1mRNA_S-dermatodea_contig12697.1656.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12697 1154..3775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12697.1656.1 ID=prot_S-dermatodea_contig12697.1656.1|Name=mRNA_S-dermatodea_contig12697.1656.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=110bp
CVCFLLLLLLLLLLESDRLCGRRVMVAMKRKRPGQEYGEDEKLLHQATKA
FTKETKRVKTFLLQQAIRKRKSTEEKQKAKQSKSAATGSSNSSSGGGGGG
GGGVSTQAVS
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