prot_S-dermatodea_contig1264.1627.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1264.1627.1
Unique Nameprot_S-dermatodea_contig1264.1627.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length207
Homology
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 5.030e-68
Identity = 110/168 (65.48%), Postives = 129/168 (76.79%), Query Frame = 0
Query:   34 GRARVAHIIGGIVPVSSKKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGRFKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIERLSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRALTDRAGG 201
            GRARV  I+G +VP+S+K+H VAPRL RV L DG+TG+AK G+AVAAG+WPALE L+ SHCRANAG F++LA GLR+G AP LRVL WDDQSS+R+ +VDDVIL ALS   CPL+ERLSFTGNRF PE+RIR+L E    CP LR L MDCSR PH  L  L     G
Sbjct:   84 GRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAG 251          
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 5.510e-68
Identity = 110/163 (67.48%), Postives = 130/163 (79.75%), Query Frame = 0
Query:   33 DGRARVAHIIGGIVPVSSKKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGRFKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIERLSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRAL 195
            +GRARV  I+G +VP+S+K+H VAPRL+RV L DG+TG+AK G+AVAAG+WPALE L+ SHCRANAG F++LA GLR+G AP LRVL WDDQSS+R+ SVDDVIL ALS   CPL+ERLSFTGNRF PE+ I +L EA   CP LR L MDCSR PH  LR L
Sbjct:   87 NGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVL 249          
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.510e-62
Identity = 106/164 (64.63%), Postives = 125/164 (76.22%), Query Frame = 0
Query:   38 VAHIIGGIVPVSSKKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGRFKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIERLSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRALTDRAGG 201
            V  I+G +VP+S+K+H VAPRL RV L DG+TG+AK G+AVAAG+WPALE L+ SHCRANAG F++LA GLR+G AP LRVL WDDQSS+R+ +VDDVIL ALS   CPL+ERLSFTGNRF PE+RIR+L E    CP LR L MDCSR PH  L  L     G
Sbjct:  309 VGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAG 472          
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 3.080e-62
Identity = 104/161 (64.60%), Postives = 123/161 (76.40%), Query Frame = 0
Query:   41 IIGGIVPVSSKKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGRFKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIERLSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRALTDRAGG 201
            I+G +VP+S+K+H VAPRL RV L DG+TG+AK G+AVA G+WPALE L+ SHCRANAG F++LA GLR+G AP LRVL WDDQSSIR+ +VDDVIL ALS   CPL+E LSFTGNRF PE+RI +L E    CP LR L MDCSR PH +LR L     G
Sbjct:  238 ILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAG 398          
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 2.700e-61
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = 0
Query:   35 RARVAHIIGGIVPVSSKKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGRFKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIERLSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRALTDRAGG 201
            R RV  I G +VP+S+K+H VA RL RV L DG+TG AK GKAVAAG+ PALE  + SHCRANAG F++LA GLR+G AP LRVL WDDQS+IR+ ++DDVIL ALS   CPL+ERLSFTG RF PE+ IR+L E F  CP LR L MDCSR PH  LR L     G
Sbjct:   11 RPRVGAIRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAG 177          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1264.1627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWR8_ECTSI5.030e-6865.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LAY2_ECTSI5.510e-6867.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWR9_ECTSI1.510e-6264.63Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KDB3_9PHAE3.080e-6264.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU71_9PHAE2.700e-6162.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 46..200
e-value: 6.4E-9
score: 36.6
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 83..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1264contigS-dermatodea_contig1264:2925..3886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1264.1627.1mRNA_S-dermatodea_contig1264.1627.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1264 2800..3998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1264.1627.1 ID=prot_S-dermatodea_contig1264.1627.1|Name=mRNA_S-dermatodea_contig1264.1627.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=207bp
MMRQASCAALHSHPALDLCRKVQDSSHKPGCIDGRARVAHIIGGIVPVSS
KKHCVAPRLTRVALSDGSTGMAKVGKAVAAGVWPALEKLSLSHCRANAGR
FKELAHGLRTGHAPNLRVLYWDDQSSIREKSVDDVILLALSARMCPLIER
LSFTGNRFWPEYRIRFLIEAFRGCPSLRGLSMDCSRQPHDDLRALTDRAG
GVRAES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf