prot_S-dermatodea_contig12571.1584.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12571.1584.1
Unique Nameprot_S-dermatodea_contig12571.1584.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length362
Homology
BLAST of mRNA_S-dermatodea_contig12571.1584.1 vs. uniprot
Match: A0A6H5KV56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV56_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.340e-43
Identity = 152/352 (43.18%), Postives = 175/352 (49.72%), Query Frame = 0
Query:    2 QVLLGKTVPPDEAGFDGCLEQSVERAALYLDPANTSTEVAPGVTFGKLDEMVSALREQIIAGPAT----QGPVFNFFADASPGRGESEVVSTSREAAAKPPLPPLPPPSN-----------GTFNPAPAAAVRVGGESPGYQSAPXXXXXXXAPGGPD---------HPGQQEMVLPLPGSLAP--PPR--PAVGADEALPVSAS-------------PRHAVGVGDGARSPTAGQLGRQASQMEEGVLPPVVSQNQN---QPRPSPPAHAGDPVLPKRERRTKARS--RGPAPPYAPAPP---GNLYAT--QPGHP-----TPPLRHPQH--LRSPFPQXXXXXLTPVQMG 295
            +VLLGKTVPPDEA FD CL QSVERA+LYLDP+N S EVAPGV++  LD+MVS LR QIIAGPA         FNFF + S G G S       + AAK   P   PP              +F P PAA  R G E  GYQ          A                   ++ LP+ G + P  PP   P VG D   P + S             P   +G+G    SPT GQLGRQASQMEEG+LPPV +   +   Q  P           PKRERR + +S  RGP P     PP   GN +AT  QP H      +PPLRH Q   LRSPFPQ     LTPVQMG
Sbjct:  286 KVLLGKTVPPDEADFDDCLAQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAATAEGDSAAFNFFGEPSSGCGSSSKAEA--DGAAKGTTPREAPPXXXXXXXXXXXXVSSFQP-PAAEARGGEELSGYQLQQQRPPKSPATSARSPIKXXXXXXXXXXXKLGLPMSGQVGPLGPPAAPPVVGIDVTPPPARSSPSLGHRGGGSQRPAEDLGLG----SPTTGQLGRQASQMEEGILPPVAANQPSHLQQASPQQQHQVDQAAFPKRERRPRPQSSSRGPGPSAGGIPPPSTGN-HATSQQPRHRHSELGSPPLRHQQQQLLRSPFPQQPTPPLTPVQMG 629          
BLAST of mRNA_S-dermatodea_contig12571.1584.1 vs. uniprot
Match: D7G7T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T6_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.030e-24
Identity = 73/142 (51.41%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    2 QVLLGKTVPPDEAGFDGCLEQSVERAALYLDPANTSTEVAPGVTFGKLDEMVSALREQIIAGPAT----QGPVFNFFADASPGRGESEVVSTSREAAAKPPLPPLPPPSN-----------GTFNPAPAAAVRVGGESPGYQ 128
            +VLLGKT+PPDEA FD CL QSVERA+LYLDP+N S EVAPGV++  LD+MVS LR QIIAGPA         FNFF + S G G S       + AAK   P   PP              +F P PAA+ R G E  GYQ
Sbjct:  329 KVLLGKTMPPDEADFDDCLGQSVERASLYLDPSNGSKEVAPGVSYATLDDMVSTLRSQIIAGPAAAAEGDSAAFNFFGEPSSGGGSSSKAEA--DGAAKGTTPREAPPXXXXXXXXXXXNVSSFQP-PAASARGGEELSGYQ 467          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12571.1584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KV56_9PHAE1.340e-4343.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7T6_ECTSI1.030e-2451.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 100..116
score: 42.35
coord: 131..143
score: 44.62
coord: 221..238
score: 28.89
coord: 154..175
score: 25.45
coord: 249..274
score: 30.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12571contigS-dermatodea_contig12571:5786..6871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12571.1584.1mRNA_S-dermatodea_contig12571.1584.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12571 5786..6871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12571.1584.1 ID=prot_S-dermatodea_contig12571.1584.1|Name=mRNA_S-dermatodea_contig12571.1584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=362bp
MQVLLGKTVPPDEAGFDGCLEQSVERAALYLDPANTSTEVAPGVTFGKLD
EMVSALREQIIAGPATQGPVFNFFADASPGRGESEVVSTSREAAAKPPLP
PLPPPSNGTFNPAPAAAVRVGGESPGYQSAPPPPPPTTAPGGPDHPGQQE
MVLPLPGSLAPPPRPAVGADEALPVSASPRHAVGVGDGARSPTAGQLGRQ
ASQMEEGVLPPVVSQNQNQPRPSPPAHAGDPVLPKRERRTKARSRGPAPP
YAPAPPGNLYATQPGHPTPPLRHPQHLRSPFPQQPTPPLTPVQMGQGLAP
PVPPPGVPTPAPPLGVPPGGSPNLSYGGGGGGWGYAQQPQLVQQHSYRPP
LHPTPPTMHPEH
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