prot_S-dermatodea_contig12563.1583.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12563.1583.1
Unique Nameprot_S-dermatodea_contig12563.1583.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length210
Homology
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 3.160e-102
Identity = 178/209 (85.17%), Postives = 196/209 (93.78%), Query Frame = 0
Query:    1 MKATSIGSLIRQAPWLALERIDGQMLPVARFLRRAGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            +K+T+IGSLIRQAPWL L+ IDGQMLPV RFLR AGVVD+ERV+R+YP++LC+SI+GELAPRVRFLW+DVGVSEEDLPRVLQTFPL+FALPL+RM+DV+  XXXXXXXXXXXXXXXXXXXX   GLERERHM+GVVRYLK+LGVQNVGRFVSRLPPVLGYDV TNL PKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL IR
Sbjct:  360 IKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVVDVERVLRAYPKVLCASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXSLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIR 568          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.690e-96
Identity = 177/209 (84.69%), Postives = 195/209 (93.30%), Query Frame = 0
Query:    1 MKATSIGSLIRQAPWLALERIDGQMLPVARFLRRAGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            +K+T+IGSLIRQAPWL L+ IDGQMLPV RFLR AGV D+ERV+R+YP++L +SI+GELAPRVRFLW+DVGVSEEDLPRVLQTFPL+FALPL+RM+DV+  XXXXXXXXXXXXXXXXXXXXX  GLERERHM+GVVRYLK+LGVQNVGRFVSRLPPVLGYDV TNL PKMDYLVE MGLSVYDVLTFPAYFSYPLDTVIEPRTEFL IR
Sbjct:  820 IKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVADVERVLRAYPKVLSASIRGELAPRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFXXXXXXXXXXXXXXXXXXXXXLLGLERERHMAGVVRYLKRLGVQNVGRFVSRLPPVLGYDVETNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIR 1028          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA)

HSP 1 Score: 238 bits (608), Expect = 7.650e-74
Identity = 127/203 (62.56%), Postives = 163/203 (80.30%), Query Frame = 0
Query:    8 SLIRQAPWLALERIDGQMLPVARFLRRA-GVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            +++RQAPWLA   ++ Q+ PVAR+L+ + G+ D++RV+R+YP+ILC SI  +L PRV FL  +VG++EED+PRV+QTFPLLFA+P+ RM+ V            XXXXXXXXXXX   GLE E+H+  VV Y++ LG+QN+GRFVSRLPPVLGYDV+ NL+PKMDYLV  MGLSVYDVLTFPAYFSYPL+++IEPRTEFLK+R
Sbjct:  117 NVLRQAPWLAEHDLETQLRPVARYLQESLGIRDMQRVLRAYPQILCCSITKDLEPRVWFLTEEVGINEEDVPRVVQTFPLLFAVPVERMRGVYGLLASELLITRXXXXXXXXXXXSLLGLEPEKHVRAVVAYMRSLGIQNIGRFVSRLPPVLGYDVSNNLMPKMDYLVAMMGLSVYDVLTFPAYFSYPLESIIEPRTEFLKLR 319          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A7S2D3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3S4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.070e-39
Identity = 84/210 (40.00%), Postives = 112/210 (53.33%), Query Frame = 0
Query:    2 KATSIGSLIRQAPWLALERIDGQMLPVARFLRRAGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXX--GLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            K   IGSL+R+APWL    ++ QM PV RFL +  V  +E V+R+YP++L + +K EL PR+ FL  D+ +S  D                        XX                        GL+   H    V +L+++GV+N+GRFV RLPPVLGYDV  N+ PK +YL + +GLS YD+  FPAYFSYPLD VI PR  +L  R
Sbjct:  235 KEDQIGSLVRKAPWLLDGNLETQMGPVVRFLTKLQVRRIETVIRAYPQVLLTDVKTELLPRIEFLMKDLDLSLADASSXXXXXXXXXXXXXXXXXXXXXXXLSNDRLGIAPESVSKVFRSFPSLLGLDTVEHFDVSVSFLQEIGVENIGRFVLRLPPVLGYDVEINMRPKWEYLTDTLGLSTYDITRFPAYFSYPLDKVIMPRASYLSDR 444          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A7S3JTN4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JTN4_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.600e-33
Identity = 81/204 (39.71%), Postives = 116/204 (56.86%), Query Frame = 0
Query:    6 IGSLIRQAPWLALERIDGQMLPVARFLRR-AGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQD-VVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLK 207
            + +L RQAPWL    +  Q+ PV  FLR  AGV  L+ V+ ++PR        EL PR+  L    GV+E    ++++TFPL+  L ++   D V+                         G++ +  M   + +L+++GVQN+ RFV+RLPPVL YDV + L PKM + V++  LS+YDV+ FPAYFSYPLD VIEPR  FL+
Sbjct:  249 LSALYRQAPWLLAASVGSQLRPVTNFLRHDAGVQRLDIVISAFPRCFLLDPDRELRPRLYAL-KKYGVTEPG--KIIETFPLVLGLDVSEQTDPVIHFWLNEIGIHRDDIPKICRAFPSLLGVDVQT-MQKSIDFLREIGVQNIARFVTRLPPVLAYDVESILRPKMTFAVQN-ALSIYDVVRFPAYFSYPLDQVIEPRAAFLQ 447          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN)

HSP 1 Score: 128 bits (321), Expect = 6.650e-31
Identity = 104/204 (50.98%), Postives = 125/204 (61.27%), Query Frame = 0
Query:    5 SIGSLIRQAPWLALERIDGQMLPVARFLR-RAGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLK 207
            SIGSL R  PWL    +   +   A  LR   GV ++E VVR+YPR L S  +  L P +  L    GV E DL  +++ FPLLF L  A M  V+D         XXXXXXXXXXXXXXX       M   V++L+ +GV N  RFV+RLPPVL YDV+ +L PKM  LV+   LSVYDV+ FPAYFSYPLD VI+PRT FLK
Sbjct:  241 SIGSLYRANPWLLAAPV-ATVRDAATVLRDEVGVTNVENVVRAYPRALLSDRESLLRP-LDVLRERAGVDEADLASLVEAFPLLFGLDDA-MGPVLDFWLDELKINXXXXXXXXXXXXXXXXXXVAT-MRANVKFLEGIGVVNTARFVTRLPPVLAYDVDRDLRPKMAELVK-CALSVYDVVRFPAYFSYPLDGVIKPRTAFLK 439          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A7S3VHI0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VHI0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.780e-29
Identity = 69/184 (37.50%), Postives = 104/184 (56.52%), Query Frame = 0
Query:   24 QMLPVARFLR-RAGVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFL 206
            +M   A FLR   G+ +L +V+ +YP +    I  ++ P V FL+ D+G+ E+++PRVL+  P+LF     +MQ VVD                          +    M+ VV +L ++GV N+GRF++RLPPVLGY V  +LVPK +YL      + ++V  FPAYF+YPL+ VI+ R E+L
Sbjct:  510 RMFKQAEFLRDEVGISNLGKVLAAYPNLFTLDIDSQIIPAVNFLF-DLGMDEDEVPRVLEAHPILFETTTIQMQSVVDFLLELEVSEEILGSIFRAFPALLTQ-DTTTTMTEVVSFLGEIGVTNIGRFITRLPPVLGYSVEKDLVPKWNYLNTVSQFASFEVSKFPAYFAYPLERVIKSRYEYL 691          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A7S2YH38_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YH38_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.730e-28
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   36 GVVDLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLK 207
            G  DL +VV +YP +L    + ++ P   +L  ++G+ E DLPRVLQ +P L  LP+ RM+ V +                         L+ E +M  VV +L  +GV ++GRF++R+PP+LGY V+  L+PK  +L      + ++V  FPAYFSYPL+ VI+ R E+++
Sbjct:  543 GTADLGKVVAAYPSVLLLDAQEQILPNAEYLMDNLGICEGDLPRVLQLYPSLLGLPIERMEAVANFLRSLGVESEEMSSMFRSFPALLT-LDVETNMKPVVAFLHSIGVMDIGRFLTRIPPILGYSVDQELMPKWKHLKMVSSDARFEVTKFPAYFSYPLERVIKARYEYIQ 713          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: A0A7S1FZA0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZA0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.480e-28
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 0
Query:   39 DLERVVRSYPRILCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            D  +++ SYP  L      ++ P + FL  +VG+   D+ RVLQ+FP +  +P+  M++ +                          L+ E  M  VV +LK +G++NVGRFVSRLPPVLGY V   L+PK  YL +  G + +++  FPA FSYPLD VI  R E+L ++
Sbjct:  473 DFHKIIVSYPDALMLDPSTQVLPVINFLHFEVGLVASDIRRVLQSFPTVLGIPVLNMKERIQFLDSLGIHGDNLCKIIRAFPHIMT-LDVETRMMPVVEFLKSIGIENVGRFVSRLPPVLGYSVENELLPKWTYLTKTCGYANFEIYRFPACFSYPLDKVIAARHEYLVMK 642          
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Match: R7Q6P9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6P9_CHOCR)

HSP 1 Score: 119 bits (297), Expect = 1.280e-27
Identity = 94/213 (44.13%), Postives = 138/213 (64.79%), Query Frame = 0
Query:    5 SIGSLIRQAPWLALERIDGQMLPVARFLRRAGVVDL------ERVVRSYPRILCSSIKGELAPRVRFLWADV-GVSEEDLPRVLQTFPLLFALPL-ARMQDVVDXXXXXXXXXXXXXXXXXXXXXXXXGLERERHMSGVVRYLKKLGVQNVGRFVSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLKIR 209
            ++ SL+R+APW+ +  I  +M+P   +L+R  V+DL      ++ +R+ P +L +S   +   +V    +DV G++   L   L++FP L    + A +     XXXXXXXXXXXXXXXXXXXXXXXX           V Y ++ G+ NVGR V RLPP+LGYD++TN++PKM+Y+ +++GLS YD+LTFP YFSY  +  IEPRT+FL+ +
Sbjct:  215 NLRSLLRRAPWVLVYDIGSEMIPAISYLKR--VLDLPNRAPVDQFIRARPLLLGTS--PDAMQKVTDFMSDVVGLTPTMLSVALRSFPPLLTCSIDATLAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNYFRRKGIINVGRIVKRLPPILGYDLDTNIIPKMEYIEQELGLSSYDILTFPGYFSYSFEKCIEPRTKFLQAK 423          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12563.1583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW7_ECTSI3.160e-10285.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUV8_9PHAE1.690e-9684.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z724_9STRA7.650e-7462.56mTERF-domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2D3S4_9STRA4.070e-3940.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3JTN4_9STRA2.600e-3339.71Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0Y3H4_AURAN6.650e-3150.98Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3VHI0_9STRA5.780e-2937.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2YH38_9STRA3.730e-2836.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1FZA0_9STRA6.480e-2836.84Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
R7Q6P9_CHOCR1.280e-2744.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 41..73
e-value: 0.18
score: 20.9
coord: 148..180
e-value: 2.1E-5
score: 33.9
coord: 7..38
e-value: 350.0
score: 7.5
coord: 114..145
e-value: 0.12
score: 21.5
coord: 181..209
e-value: 780.0
score: 4.7
coord: 78..109
e-value: 420.0
score: 6.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 63..207
e-value: 2.4E-26
score: 92.4
coord: 31..146
e-value: 6.2E-17
score: 61.5
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..209
e-value: 7.2E-35
score: 122.4
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 6..206
NoneNo IPR availablePANTHERPTHR13068:SF46coord: 6..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12563contigS-dermatodea_contig12563:143..5988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12563.1583.1mRNA_S-dermatodea_contig12563.1583.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12563 125..5988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12563.1583.1 ID=prot_S-dermatodea_contig12563.1583.1|Name=mRNA_S-dermatodea_contig12563.1583.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=210bp
MKATSIGSLIRQAPWLALERIDGQMLPVARFLRRAGVVDLERVVRSYPRI
LCSSIKGELAPRVRFLWADVGVSEEDLPRVLQTFPLLFALPLARMQDVVD
FLSVDLTINDKDIAKIIRAFPSLLGLERERHMSGVVRYLKKLGVQNVGRF
VSRLPPVLGYDVNTNLVPKMDYLVEDMGLSVYDVLTFPAYFSYPLDTVIE
PRTEFLKIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf