prot_S-dermatodea_contig12559.1579.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12559.1579.1
Unique Nameprot_S-dermatodea_contig12559.1579.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length215
Homology
BLAST of mRNA_S-dermatodea_contig12559.1579.1 vs. uniprot
Match: A0A6H5L171_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L171_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.210e-51
Identity = 101/210 (48.10%), Postives = 119/210 (56.67%), Query Frame = 0
Query:   10 PGNGSGLWNGPEGKVIFKSNVAMEKCGTLVSYNAPYGNADGSYRSNYGGAIYNEGKVSFYEDAVFESNAADNGGA--INNAGTMKFLKRSKATFSENESLRSXXXXXXXXXLVMRNTAEFLDGVAGGSGGAIYVRQEGRMTFIKXXXXXXXXXXXXXXXISTSFDLVDDLPADATYTDNVILNADYDFQCDNVYVNGAL---EDDYTCLP 214
            PGNG  LWNGP+ KV+FK  V M  C     Y     + +G Y    GGA+Y EGK+SFYEDAVF  N  D GGA  I   G +KFLKRSKATF+ N S            LVMRNTA F DGV+G SGGAI       M FIK               I+T++  ++ LP DATY  NV+ NADYD+ C +VYVNG+    ED Y CLP
Sbjct:   81 PGNGGALWNGPDAKVVFKEAVEMTNC-----YGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGGTGVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDASEMVFIKHVNFIGNSADAHGGAIATTYPNIEFLPQDATYEGNVLQNADYDYVCPDVYVNGSEDGGEDGYICLP 285          
BLAST of mRNA_S-dermatodea_contig12559.1579.1 vs. uniprot
Match: D8LU56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU56_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.980e-49
Identity = 105/221 (47.51%), Postives = 124/221 (56.11%), Query Frame = 0
Query:    3 VAEDDAR--PGNGSGLWNGPEGKVIFKSNVAMEKCGTLVSYNAPYGNADGSYRSNY--GGAIYNEGKVSFYEDAVFESNAADNGGAI--NNAGTMKFLKRSKATFSENESLRSXXXXXXXXXLVMRNTAEFLDGVAGGSGGAIYVRQEGRMTFIKXXXXXXXXXXXXXXXISTSFDLVDDLPADATYTDNVILNADYDFQCDNVYVNGAL---EDDYTCLP 214
            V+ D A   PG+G GLWNGP GK++FK  V M+ CG              S+RS    GGAIY +GKVSFYEDA F  N AD GGAI     G +KFLK++K TF+ N S  S         LV+RNT  F DG AGGSGGAIY      M F+K               I+TS+  +DDLP DATY  N   NAD DF+C+NVYVNG     ED Y C+P
Sbjct:  167 VSSDTASVIPGDGGGLWNGPGGKIVFKEAVEMKNCGERTGLR--------SWRSQGLDGGAIYTDGKVSFYEDAQFTDNEADEGGAICIGVDGELKFLKKAKVTFTGNNSEGSGGHINNDGTLVLRNTGVFSDGYAGGSGGAIYAGDFSSMLFVKHVDFLDNTAGAHGGAIATSYPNIDDLPEDATYQGNSRTNADSDFECNNVYVNGDAGGGEDGYICIP 379          
BLAST of mRNA_S-dermatodea_contig12559.1579.1 vs. uniprot
Match: D7G627_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G627_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 1.030e-48
Identity = 100/210 (47.62%), Postives = 118/210 (56.19%), Query Frame = 0
Query:   10 PGNGSGLWNGPEGKVIFKSNVAMEKCGTLVSYNAPYGNADGSYRSNYGGAIYNEGKVSFYEDAVFESNAADNGGA--INNAGTMKFLKRSKATFSENESLRSXXXXXXXXXLVMRNTAEFLDGVAGGSGGAIYVRQEGRMTFIKXXXXXXXXXXXXXXXISTSFDLVDDLPADATYTDNVILNADYDFQCDNVYVNGAL---EDDYTCLP 214
            PGNG  LWNGP+ KV+FK  V M  C     Y     + +G Y    GGA+Y EGK+SFYEDAVF  N  D GGA  I     +KFLKRSKATF+ N S            LVMRNTA F DGV+G SGGAI       M FIK               I+T++  ++ LP DATY  NV+ NADYD+ C +VYVNG+    ED Y CLP
Sbjct:  187 PGNGGALWNGPDAKVVFKEAVEMTNC-----YGKKTEDYNGRYTGLEGGAVYTEGKISFYEDAVFTDNEGDEGGAMWIGVTAVVKFLKRSKATFARNTSENRGGHIMNEGVLVMRNTAVFEDGVSGSSGGAINAGDVSEMVFIKHVDFIGNSADAHGGAIATTYPNIEFLPQDATYEGNVLQNADYDYVCPDVYVNGSEDGGEDGYICLP 391          
BLAST of mRNA_S-dermatodea_contig12559.1579.1 vs. uniprot
Match: D7FSQ1_ECTSI (Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ1_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 3.150e-37
Identity = 92/214 (42.99%), Postives = 121/214 (56.54%), Query Frame = 0
Query:    8 ARPGNGSGLWNGPEGKVIFKSNVAMEKCGTLVSYNAPYGNADGSYRSNYGGAIYNEGKVSFYEDAVFESNAADNGGA--INNAGTMKFLKRSKATFSENESLRSXXXXXXXXXLVMRNTAEFLDGVA-GGSGGAIYVRQEGRMTFIKXXXXXXXXXXXXXXXISTSFDLVDDLPADATYTDNVILN-ADYDFQCDNVYVNG---ALEDDYTCLP 214
            A  GNG+G+WNG + KV+FK  V M+ CG     N P+  ++G+   + GGAIY++G+VSF+EDA+F +N AD GGA  I   G +KFLK +KATF  N    +         LVMRNTA F  G +  GSGG I       M F+K               I   +D V+ LP DATYTDN I+N +D  ++C++VYV G     ED Y CLP
Sbjct:  181 AMAGNGAGIWNGKDAKVVFKEAVEMDFCG-----NWPW-TSNGAEPGSDGGAIYSDGEVSFFEDALFTNNEADEGGALWIGVTGVVKFLKSAKATFQSNSGPGNGGTINNYGVLVMRNTASFNQGRSTDGSGGCISCGPASEMVFVKNVLFDGCQSTEHGAAIYIDYDNVEFLPEDATYTDNFIVNNSDGFYKCEDVYVVGDGSGDEDAYMCLP 388          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12559.1579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L171_9PHAE2.210e-5148.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU56_ECTSI1.980e-4947.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G627_ECTSI1.030e-4847.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSQ1_ECTSI3.150e-3742.99Adhesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 34..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12559contigS-dermatodea_contig12559:2868..5117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12559.1579.1mRNA_S-dermatodea_contig12559.1579.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12559 2823..6000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12559.1579.1 ID=prot_S-dermatodea_contig12559.1579.1|Name=mRNA_S-dermatodea_contig12559.1579.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=215bp
MNVAEDDARPGNGSGLWNGPEGKVIFKSNVAMEKCGTLVSYNAPYGNADG
SYRSNYGGAIYNEGKVSFYEDAVFESNAADNGGAINNAGTMKFLKRSKAT
FSENESLRSGGHLSNSGTLVMRNTAEFLDGVAGGSGGAIYVRQEGRMTFI
KHVDFVGNTAGAHGGAISTSFDLVDDLPADATYTDNVILNADYDFQCDNV
YVNGALEDDYTCLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence