prot_S-dermatodea_contig12555.1574.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12555.1574.1
Unique Nameprot_S-dermatodea_contig12555.1574.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length112
Homology
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BLAST of mRNA_S-dermatodea_contig12555.1574.1 vs. uniprot
Match: D7FXG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG3_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 5.580e-11
Identity = 55/113 (48.67%), Postives = 67/113 (59.29%), Query Frame = 0 
Query:    1 MFSSNVSGHSTYSGFSGLSAFNALGGSDLG-SVGGRDVGAMGSGXXXXXXXXXXXTTNIVSAALPWRTPTPPTASSKADPTAVDEGSAMGTYAAAHGSTGGALGWGAVMGTGG 112
            +F SNVSGHS+YSGFS +S+ +A GGS+LG S GG  +  + +    XXXX     T        WRTP  P  S K DP     G   G   A HGSTGGALGWG++MG+GG
Sbjct:   59 IFGSNVSGHSSYSGFSAMSSMHAFGGSELGNSSGGGGMAGVNAAADGXXXXNNNPAT--------WRTP--PLGSQKGDP-----GDESGNPPA-HGSTGGALGWGSIMGSGG 155
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BLAST of mRNA_S-dermatodea_contig12555.1574.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.250e-10
Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:    1 MFSSNVSGHSTYSGFSGLSAFNALGGSDLGSVGGRDVGAMGSGXXXXXXXXXXXTTNIVSAALPWRTPTPPTASSKADPTAVDEGSAMGTYAAAHGSTGGALGWGAVMGTGG 112
            +F SNVSGHS+YSGFS +S+ +A GGS+LG+      G M  G             N+ +    WRTP  P  S K DP     G   G   A HGSTGGALGWG++MG+GG
Sbjct: 1619 IFGSNVSGHSSYSGFSAMSSMHAFGGSELGNS---SSGGMAGGNAPADGSSSG--NNLAT----WRTP--PLGSQKGDP-----GDESGNPPA-HGSTGGALGWGSIMGSGG 1713
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12555.1574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXG3_ECTSI5.580e-1148.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3L2_9PHAE6.250e-1045.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12555contigS-dermatodea_contig12555:158..493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12555.1574.1mRNA_S-dermatodea_contig12555.1574.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12555 158..2811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12555.1574.1 ID=prot_S-dermatodea_contig12555.1574.1|Name=mRNA_S-dermatodea_contig12555.1574.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=112bp
MFSSNVSGHSTYSGFSGLSAFNALGGSDLGSVGGRDVGAMGSGSGGGGHG
SGSGTTNIVSAALPWRTPTPPTASSKADPTAVDEGSAMGTYAAAHGSTGG
ALGWGAVMGTGG
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