prot_S-dermatodea_contig12493.1544.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12493.1544.1
Unique Nameprot_S-dermatodea_contig12493.1544.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length425
Homology
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.160e-68
Identity = 166/367 (45.23%), Postives = 186/367 (50.68%), Query Frame = 0
Query:  134 PPSRFSMPALVDGDWSYRVNDHRRDGASLIPV---------------------------------------------CGGXXXXXARSRGVG-GRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPV---------AGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVT---------------------GVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARAVGCGAGHTMVVL 424
            PP  F+MPA V  DW+YRVNDHRR GA L+ V                                              G          G G GRGP++IAAGWRHSVAVT EGA F WGCGS+GRLG GSH D   PRQVRALASRAIR+RQAAAGRAHT+FLS+SG VYSCGS+EFGQQGR    +                             V G         S S     LAP +V             GLRV+ VA GDDHCTV+   + + P   +++                         G   GRR VF WGLNAAGQC  GRAAE+V APQEAELLSGARAVGCGAGHTMVVL
Sbjct: 1180 PPEAFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGVTEGMTVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSEGRLGLGSHVDANAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRGGAGS---AAQRSSASQSNADGSSRETSRSTHPAVDGGXXXXXXXVSTSLC--MLAPTIVTXXXXXXXXGGVSGLRVQRVAAGDDHCTVL---TSSEPNTVTATXXXXXXXXXXXXXXXXXXXXXXXXQGSSSGRR-VFTWGLNAAGQCAHGRAAEVVGAPQEAELLSGARAVGCGAGHTMVVL 1537          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A6H5JWJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ8_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.760e-65
Identity = 181/365 (49.59%), Postives = 200/365 (54.79%), Query Frame = 0
Query:  134 PPSRFSMPALVDGDWSYRVNDHRRDGASLIPV---------------------------------------------CGGXXXXXARSRGVG-GRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGS----SPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAA--PSLANPGPR----------------------SSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARAVGCGAGHTMVVL 424
            PP  F+MPA V  DW+YRVNDHRR GA L+ V                                              G          G G GRGP++IAAGWRHSVAVT EGA F WGCGS GRLG GSH D   PRQVRALASRAIR+RQAAAGRAHT+FLS+SG VYSCGS+EFGQQGR    +      XXXXXXXXXXXXXXXXXXXXXXX                +P+               GLRV+ VA GDDHCTV+ +  P+ A                           +S G  +      RRVF WGLNAAGQC  GR  E+V APQEAELLSGARAVGCGAGHTMVVL
Sbjct:  853 PPEAFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGDTEGMSVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSDGRLGLGSHVDAGAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRGGAGSAARRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTIXXXXXXXXXXXGVSGLRVQRVAAGDDHCTVLTSSEPNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQGSSS------RRVFTWGLNAAGQCAHGRVVEVVGAPQEAELLSGARAVGCGAGHTMVVL 1211          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A7S3Y2W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2W4_HETAK)

HSP 1 Score: 120 bits (302), Expect = 3.500e-28
Identity = 88/246 (35.77%), Postives = 110/246 (44.72%), Query Frame = 0
Query:  180 GGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSG-ARAVGCGAGHTMVVL 424
            GG+G   +AAGW HSVAVTAEGA F WGCG  GRLG G+H D   P Q+RALA  A+R+ +AAAG  HT+FL   G V++ G  +FGQ G    +A                             VGG       G                         VA G++H  V           R+S G V          + WGLN   +  QGR  + V  P E  +LSG ARA+  GA HT+VV+
Sbjct:   22 GGKGVAFVAAGWAHSVAVTAEGAVFAWGCGEHGRLGLGAHRDAAFPEQLRALAHPALRVAKAAAGYGHTLFLGRDGRVFATGLAKFGQVGIPEEMA-------NGAFDLVKNGRKGFPALLAPLHVGGA---LAPGXXXXXXXXXXXXXXXXXXXXXXXVDVAAGENHSVV-----------RTSGGAV----------YTWGLNLGDRAAQGRGTQAVPVPTEVPILSGKARAITAGAAHTLVVV 236          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A7S3X5W4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X5W4_EMIHU)

HSP 1 Score: 74.3 bits (181), Expect = 1.180e-11
Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  174 ARSRGVGGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVE-TPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQG 269
            ARS G   R  +S+AAG  HS+A+TA+GA +VWG G +G+LG G        PRQV ALA R  R   AAAG +H++F++  G V+SCG  + GQ G
Sbjct:   46 ARSPGWKERRVVSVAAGEDHSIAITADGAFWVWGNGQEGQLGHGVEPGFFFRPRQVAALAGR--RAVAAAAGSSHSLFVTADGLVWSCGCGDEGQLG 140          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI001E1CE378 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE378)

HSP 1 Score: 73.2 bits (178), Expect = 5.320e-10
Identity = 54/161 (33.54%), Postives = 73/161 (45.34%), Query Frame = 0
Query:  121 ASSDQKPPLKQFPPPSRFSMPALVDGDWSYRV--------NDHRRDGASLIPVCGGXXXXXARSRGVGGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASP 273
            A S    P    P P+  +  A +D   +  +        +D  RD + +  +        AR    G    + +A G  HSV V A G T+ WG  S G+LG G      +P   R   S  +RI Q AAG  HTIFL+ SG +YSCG  + GQ GR +P
Sbjct:  956 AGSSSPLPTPASPDPAALAAAAALDPLATSNILAAEDGLGSDQERDASKISSLS------PARVHLPGTTAVVQVACGLHHSVVVCANGETYTWGSNSYGQLGVGDLLSRGSPAMTRLPPS--VRIVQVAAGSNHTIFLTASGQIYSCGDFQKGQLGRVAP 1108          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI00109B91FA (probable E3 ubiquitin-protein ligase HERC1 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B91FA)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-9
Identity = 68/245 (27.76%), Postives = 94/245 (38.37%), Query Frame = 0
Query:  186 SIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLS-DSGTVYSCGSDEFGQQGRAS------PVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARA--VGCGAGHTM 421
            S+AAG+RHS AVT +G  + WG G  GRLG G +     P QV+ + S    I Q A G AHT+ +S D  TV+S GS + G+ G         P                                 G G     GS  +    S  P ++       +  +AVGD HC V+   +                      V+ WG N+ GQC QG     +  P++   L G     +  G  HT+
Sbjct:  526 SVAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNIPVQVKDVTS----IGQVACGSAHTVCVSMDGSTVWSFGSGDNGKLGHGDTNRVYKPKIIEGLQGMIIRKVCCGSQCSLALTNTGQVYAWGCGPCLGTGSVDAT---SARPKLIAGLQPFHIVDIAVGDSHCAVLTREN---------------------EVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTI 742          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A7RSK3_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSK3_NEMVE)

HSP 1 Score: 71.6 bits (174), Expect = 1.350e-9
Identity = 67/244 (27.46%), Postives = 95/244 (38.93%), Query Frame = 0
Query:  187 IAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSG-TVYSCGSDEFGQQGRAS------PVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARA--VGCGAGHTM 421
            IAAG+RHS AVT +G  + WG G  GRLG G +     P QV+ +A+    + Q A G AHT+ +S  G TV+S GS + G+ G +       P                               V G G     GS  +    S  P ++       V  ++VGD HC  +   +                      V+ WG N+ GQC QG     +  P++   L G     +  G  HT+
Sbjct:  508 IAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVAN----VGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDAT---SATPKLLLALQSHSVVDISVGDSHCVALTQDN---------------------NVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 723          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A2R7VUP3_ONCFA (Uncharacterized protein (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7VUP3_ONCFA)

HSP 1 Score: 70.1 bits (170), Expect = 2.840e-9
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0
Query:  185 ISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQG 269
            + I AG  HS+A+  +   F WG G  G+LG G+  D   P+ + +LA    RI   AAG+AH++FLS++G+V+SCGS+ FGQ G
Sbjct:  389 VQIVAGQYHSIALDDKRRVFTWGWGVHGQLGHGNIEDCFYPKLLSSLAKE--RIIWCAAGQAHSLFLSENGSVWSCGSNAFGQMG 471          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI001F5F7D30 (uncharacterized protein LOC124775860 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F7D30)

HSP 1 Score: 70.5 bits (171), Expect = 3.500e-9
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  186 SIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPV 274
            SI+AG  HS+A+TA+G  + WG G  G+LG GS  D   P+ V+ L  + ++  Q + G  H++FL+++G V++CGS  FGQ G    +
Sbjct:  998 SISAGQYHSLALTADGRVYSWGWGVHGQLGIGSIEDALHPKPVKRLNGQVVK--QISGGHGHSLFLTETGEVFTCGSSVFGQLGNGGNI 1084          
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A6P4BVJ1_ARADU (ultraviolet-B receptor UVR8 n=21 Tax=fabids TaxID=91835 RepID=A0A6P4BVJ1_ARADU)

HSP 1 Score: 69.7 bits (169), Expect = 3.790e-9
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
Query:  189 AGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQ 267
            AG  HS+AVT+ G  + +G  S G+LG G+  +   PR +R L  + IRI QAAAG   T+ +SDSG VY+CG D FG+
Sbjct:  155 AGPGHSIAVTSNGVVYSFGSNSSGQLGHGTTEEEWRPRPIRTL--QGIRIIQAAAGAGRTMLISDSGQVYACGKDSFGE 231          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN1_ECTSI1.160e-6845.23Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
A0A6H5JWJ8_9PHAE1.760e-6549.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y2W4_HETAK3.500e-2835.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3X5W4_EMIHU1.180e-1148.45Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
UPI001E1CE3785.320e-1033.54LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase M... [more]
UPI00109B91FA1.230e-927.76probable E3 ubiquitin-protein ligase HERC1 isoform... [more]
A7RSK3_NEMVE1.350e-927.46Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A2R7VUP3_ONCFA2.840e-944.71Uncharacterized protein (Fragment) n=1 Tax=Oncopel... [more]
UPI001F5F7D303.500e-940.45uncharacterized protein LOC124775860 n=2 Tax=Schis... [more]
A0A6P4BVJ1_ARADU3.790e-948.10ultraviolet-B receptor UVR8 n=21 Tax=fabids TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 202..218
score: 39.22
coord: 341..357
score: 26.47
coord: 257..273
score: 35.29
coord: 238..251
score: 44.05
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 377..423
e-value: 1.0E-4
score: 22.8
coord: 200..251
e-value: 1.2E-11
score: 45.0
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 187..197
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 1..11
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 201..254
score: 15.328
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 376..424
score: 8.956
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 171..300
e-value: 2.1E-24
score: 88.1
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 301..424
e-value: 2.9E-8
score: 34.7
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..423
NoneNo IPR availablePANTHERPTHR45622FAMILY NOT NAMEDcoord: 136..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12493contigS-dermatodea_contig12493:354..2848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12493.1544.1mRNA_S-dermatodea_contig12493.1544.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12493 354..2848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12493.1544.1 ID=prot_S-dermatodea_contig12493.1544.1|Name=mRNA_S-dermatodea_contig12493.1544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=425bp
VACGREHSLALARPRREEGSCSRQGTAAPASSAPTVNLLFSWGRAGCGRL
GRSPPPGQAPPSLPPPPPPQDPQPSTPRTSSALLPLAASLARNVSGGGSG
GASSAGGGREASGYHLAHAHASSDQKPPLKQFPPPSRFSMPALVDGDWSY
RVNDHRRDGASLIPVCGGGGGGGARSRGVGGRGPISIAAGWRHSVAVTAE
GATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIF
LSDSGTVYSCGSDEFGQQGRASPVAPPPPASASAAEGRGGKHRTSSGSGS
SSSGVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTV
IAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVA
PQEAELLSGARAVGCGAGHTMVVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II