mRNA_S-dermatodea_contig12493.1544.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12493.1544.1
Unique NamemRNA_S-dermatodea_contig12493.1544.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.160e-68
Identity = 166/367 (45.23%), Postives = 186/367 (50.68%), Query Frame = 1 
Query:  400 PPSRFSMPALVDGDWSYRVNDHRRDGASLIPV---------------------------------------------CGGXXXXXARSRGVG-GRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPV---------AGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVT---------------------GVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARAVGCGAGHTMVVL 1272
            PP  F+MPA V  DW+YRVNDHRR GA L+ V                                              G          G G GRGP++IAAGWRHSVAVT EGA F WGCGS+GRLG GSH D   PRQVRALASRAIR+RQAAAGRAHT+FLS+SG VYSCGS+EFGQQGR    +                             V G         S S     LAP +V             GLRV+ VA GDDHCTV+   + + P   +++                         G   GRR VF WGLNAAGQC  GRAAE+V APQEAELLSGARAVGCGAGHTMVVL
Sbjct: 1180 PPEAFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGVTEGMTVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSEGRLGLGSHVDANAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRGGAGS---AAQRSSASQSNADGSSRETSRSTHPAVDGGXXXXXXXVSTSLC--MLAPTIVTXXXXXXXXGGVSGLRVQRVAAGDDHCTVL---TSSEPNTVTATXXXXXXXXXXXXXXXXXXXXXXXXQGSSSGRR-VFTWGLNAAGQCAHGRAAEVVGAPQEAELLSGARAVGCGAGHTMVVL 1537
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A6H5JWJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ8_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.760e-65
Identity = 181/365 (49.59%), Postives = 200/365 (54.79%), Query Frame = 1 
Query:  400 PPSRFSMPALVDGDWSYRVNDHRRDGASLIPV---------------------------------------------CGGXXXXXARSRGVG-GRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGS----SPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAA--PSLANPGPR----------------------SSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARAVGCGAGHTMVVL 1272
            PP  F+MPA V  DW+YRVNDHRR GA L+ V                                              G          G G GRGP++IAAGWRHSVAVT EGA F WGCGS GRLG GSH D   PRQVRALASRAIR+RQAAAGRAHT+FLS+SG VYSCGS+EFGQQGR    +      XXXXXXXXXXXXXXXXXXXXXXX                +P+               GLRV+ VA GDDHCTV+ +  P+ A                           +S G  +      RRVF WGLNAAGQC  GR  E+V APQEAELLSGARAVGCGAGHTMVVL
Sbjct:  853 PPEAFNMPAPVAADWTYRVNDHRRHGAPLVAVPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGDTEGMSVLEPGDGVGRGPVAIAAGWRHSVAVTEEGAVFAWGCGSDGRLGLGSHVDAGAPRQVRALASRAIRVRQAAAGRAHTLFLSESGNVYSCGSNEFGQQGRGGAGSAARRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTIXXXXXXXXXXXGVSGLRVQRVAAGDDHCTVLTSSEPNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXNSQGSSS------RRVFTWGLNAAGQCAHGRVVEVVGAPQEAELLSGARAVGCGAGHTMVVL 1211
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A7S3Y2W4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2W4_HETAK)

HSP 1 Score: 120 bits (302), Expect = 3.500e-28
Identity = 88/246 (35.77%), Postives = 110/246 (44.72%), Query Frame = 1 
Query:  538 GGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSG-ARAVGCGAGHTMVVL 1272
            GG+G   +AAGW HSVAVTAEGA F WGCG  GRLG G+H D   P Q+RALA  A+R+ +AAAG  HT+FL   G V++ G  +FGQ G    +A                             VGG       G                         VA G++H  V           R+S G V          + WGLN   +  QGR  + V  P E  +LSG ARA+  GA HT+VV+
Sbjct:   22 GGKGVAFVAAGWAHSVAVTAEGAVFAWGCGEHGRLGLGAHRDAAFPEQLRALAHPALRVAKAAAGYGHTLFLGRDGRVFATGLAKFGQVGIPEEMA-------NGAFDLVKNGRKGFPALLAPLHVGGA---LAPGXXXXXXXXXXXXXXXXXXXXXXXVDVAAGENHSVV-----------RTSGGAV----------YTWGLNLGDRAAQGRGTQAVPVPTEVPILSGKARAITAGAAHTLVVV 236
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A7S3X5W4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X5W4_EMIHU)

HSP 1 Score: 74.3 bits (181), Expect = 1.180e-11
Identity = 47/97 (48.45%), Postives = 62/97 (63.92%), Query Frame = 1 
Query:  520 ARSRGVGGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVE-TPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQG 807
            ARS G   R  +S+AAG  HS+A+TA+GA +VWG G +G+LG G        PRQV ALA R  R   AAAG +H++F++  G V+SCG  + GQ G
Sbjct:   46 ARSPGWKERRVVSVAAGEDHSIAITADGAFWVWGNGQEGQLGHGVEPGFFFRPRQVAALAGR--RAVAAAAGSSHSLFVTADGLVWSCGCGDEGQLG 140
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI001E1CE378 (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CE378)

HSP 1 Score: 73.2 bits (178), Expect = 5.320e-10
Identity = 54/161 (33.54%), Postives = 73/161 (45.34%), Query Frame = 1 
Query:  361 ASSDQKPPLKQFPPPSRFSMPALVDGDWSYRV--------NDHRRDGASLIPVCGGXXXXXARSRGVGGRGPISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASP 819
            A S    P    P P+  +  A +D   +  +        +D  RD + +  +        AR    G    + +A G  HSV V A G T+ WG  S G+LG G      +P   R   S  +RI Q AAG  HTIFL+ SG +YSCG  + GQ GR +P
Sbjct:  956 AGSSSPLPTPASPDPAALAAAAALDPLATSNILAAEDGLGSDQERDASKISSLS------PARVHLPGTTAVVQVACGLHHSVVVCANGETYTWGSNSYGQLGVGDLLSRGSPAMTRLPPS--VRIVQVAAGSNHTIFLTASGQIYSCGDFQKGQLGRVAP 1108
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI00109B91FA (probable E3 ubiquitin-protein ligase HERC1 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B91FA)

HSP 1 Score: 72.0 bits (175), Expect = 1.230e-9
Identity = 68/245 (27.76%), Postives = 94/245 (38.37%), Query Frame = 1 
Query:  556 SIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLS-DSGTVYSCGSDEFGQQGRAS------PVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARA--VGCGAGHTM 1263
            S+AAG+RHS AVT +G  + WG G  GRLG G +     P QV+ + S    I Q A G AHT+ +S D  TV+S GS + G+ G         P                                 G G     GS  +    S  P ++       +  +AVGD HC V+   +                      V+ WG N+ GQC QG     +  P++   L G     +  G  HT+
Sbjct:  526 SVAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNIPVQVKDVTS----IGQVACGSAHTVCVSMDGSTVWSFGSGDNGKLGHGDTNRVYKPKIIEGLQGMIIRKVCCGSQCSLALTNTGQVYAWGCGPCLGTGSVDAT---SARPKLIAGLQPFHIVDIAVGDSHCAVLTREN---------------------EVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTI 742
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A7RSK3_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RSK3_NEMVE)

HSP 1 Score: 71.6 bits (174), Expect = 1.350e-9
Identity = 67/244 (27.46%), Postives = 95/244 (38.93%), Query Frame = 1 
Query:  559 IAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSG-TVYSCGSDEFGQQGRAS------PVAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTVIAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVAPQEAELLSGARA--VGCGAGHTM 1263
            IAAG+RHS AVT +G  + WG G  GRLG G +     P QV+ +A+    + Q A G AHT+ +S  G TV+S GS + G+ G +       P                               V G G     GS  +    S  P ++       V  ++VGD HC  +   +                      V+ WG N+ GQC QG     +  P++   L G     +  G  HT+
Sbjct:  508 IAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVAN----VGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDAT---SATPKLLLALQSHSVVDISVGDSHCVALTQDN---------------------NVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 723
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A2R7VUP3_ONCFA (Uncharacterized protein (Fragment) n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7VUP3_ONCFA)

HSP 1 Score: 70.1 bits (170), Expect = 2.840e-9
Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 1 
Query:  553 ISIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQG 807
            + I AG  HS+A+  +   F WG G  G+LG G+  D   P+ + +LA    RI   AAG+AH++FLS++G+V+SCGS+ FGQ G
Sbjct:  389 VQIVAGQYHSIALDDKRRVFTWGWGVHGQLGHGNIEDCFYPKLLSSLAKE--RIIWCAAGQAHSLFLSENGSVWSCGSNAFGQMG 471
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: UPI001F5F7D30 (uncharacterized protein LOC124775860 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5F7D30)

HSP 1 Score: 70.5 bits (171), Expect = 3.500e-9
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 1 
Query:  556 SIAAGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQQGRASPV 822
            SI+AG  HS+A+TA+G  + WG G  G+LG GS  D   P+ V+ L  + ++  Q + G  H++FL+++G V++CGS  FGQ G    +
Sbjct:  998 SISAGQYHSLALTADGRVYSWGWGVHGQLGIGSIEDALHPKPVKRLNGQVVK--QISGGHGHSLFLTETGEVFTCGSSVFGQLGNGGNI 1084
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BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Match: A0A6P4BVJ1_ARADU (ultraviolet-B receptor UVR8 n=21 Tax=fabids TaxID=91835 RepID=A0A6P4BVJ1_ARADU)

HSP 1 Score: 69.7 bits (169), Expect = 3.790e-9
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 1 
Query:  565 AGWRHSVAVTAEGATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIFLSDSGTVYSCGSDEFGQ 801
            AG  HS+AVT+ G  + +G  S G+LG G+  +   PR +R L  + IRI QAAAG   T+ +SDSG VY+CG D FG+
Sbjct:  155 AGPGHSIAVTSNGVVYSFGSNSSGQLGHGTTEEEWRPRPIRTL--QGIRIIQAAAGAGRTMLISDSGQVYACGKDSFGE 231
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12493.1544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN1_ECTSI1.160e-6845.23Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
A0A6H5JWJ8_9PHAE1.760e-6549.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y2W4_HETAK3.500e-2835.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3X5W4_EMIHU1.180e-1148.45Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
UPI001E1CE3785.320e-1033.54LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase M... [more]
UPI00109B91FA1.230e-927.76probable E3 ubiquitin-protein ligase HERC1 isoform... [more]
A7RSK3_NEMVE1.350e-927.46Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
A0A2R7VUP3_ONCFA2.840e-944.71Uncharacterized protein (Fragment) n=1 Tax=Oncopel... [more]
UPI001F5F7D303.500e-940.45uncharacterized protein LOC124775860 n=2 Tax=Schis... [more]
A0A6P4BVJ1_ARADU3.790e-948.10ultraviolet-B receptor UVR8 n=21 Tax=fabids TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12493contigS-dermatodea_contig12493:354..2848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.4
Seed ortholog evalue1.5e-63
Seed eggNOG ortholog2880.D7FTN1
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-11_001730.1
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1275
Cds size1275
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924249.9602997-CDS-S-dermatodea_contig12493:353..10341622924249.9602997-CDS-S-dermatodea_contig12493:353..1034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12493 354..1034 +
1694079124.6758776-CDS-S-dermatodea_contig12493:353..10341694079124.6758776-CDS-S-dermatodea_contig12493:353..1034Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12493 354..1034 +
1622924249.9724538-CDS-S-dermatodea_contig12493:2254..28481622924249.9724538-CDS-S-dermatodea_contig12493:2254..2848Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12493 2255..2848 +
1694079124.6851783-CDS-S-dermatodea_contig12493:2254..28481694079124.6851783-CDS-S-dermatodea_contig12493:2254..2848Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12493 2255..2848 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12493.1544.1prot_S-dermatodea_contig12493.1544.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12493 354..2848 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12493.1544.1

>prot_S-dermatodea_contig12493.1544.1 ID=prot_S-dermatodea_contig12493.1544.1|Name=mRNA_S-dermatodea_contig12493.1544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=425bp
VACGREHSLALARPRREEGSCSRQGTAAPASSAPTVNLLFSWGRAGCGRL
GRSPPPGQAPPSLPPPPPPQDPQPSTPRTSSALLPLAASLARNVSGGGSG
GASSAGGGREASGYHLAHAHASSDQKPPLKQFPPPSRFSMPALVDGDWSY
RVNDHRRDGASLIPVCGGGGGGGARSRGVGGRGPISIAAGWRHSVAVTAE
GATFVWGCGSQGRLGSGSHADVETPRQVRALASRAIRIRQAAAGRAHTIF
LSDSGTVYSCGSDEFGQQGRASPVAPPPPASASAAEGRGGKHRTSSGSGS
SSSGVGGDGVDTRGGSSPSRLPDSLAPLVVPVAGGLRVESVAVGDDHCTV
IAAPSLANPGPRSSSGGVTGVEEGRRRVFMWGLNAAGQCVQGRAAEIVVA
PQEAELLSGARAVGCGAGHTMVVL*
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mRNA from alignment at S-dermatodea_contig12493:354..2848+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12493.1544.1 ID=mRNA_S-dermatodea_contig12493.1544.1|Name=mRNA_S-dermatodea_contig12493.1544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2495bp|location=Sequence derived from alignment at S-dermatodea_contig12493:354..2848+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGCTTGCGGCCGTGAGCACTCCCTCGCGTTAGCGCGCCCACGAAGGGA
GGAAGGCTCTTGTTCTCGGCAGGGAACCGCTGCCCCGGCGTCCTCGGCGC
CCACGGTTAATCTGCTCTTCTCCTGGGGACGGGCGGGGTGCGGTAGACTC
GGCAGATCGCCGCCGCCCGGGCAAGCGCCGCCGTCGCTGCCGCCGCCGCC
GCCGCCGCAGGACCCGCAGCCTTCAACACCGCGAACAAGCAGCGCGTTGC
TCCCGCTCGCAGCCAGCCTCGCTCGAAACGTTAGCGGCGGCGGTAGCGGC
GGCGCCAGCAGTGCCGGCGGAGGTCGGGAGGCCTCCGGATACCACCTGGC
GCACGCGCACGCCTCCTCGGATCAGAAACCCCCCTTGAAGCAGTTCCCCC
CGCCGAGCCGTTTCAGCATGCCGGCGCTGGTCGACGGCGACTGGTCGTAC
CGCGTGAACGACCACCGGAGAGACGGGGCCTCGCTCATACCCGTGTGCGG
CGGCGGCGGCGGCGGCGGCGCCCGCTCTCGAGGCGTTGGGGGGCGGGGGC
CCATTTCGATCGCCGCGGGATGGCGACATTCTGTCGCCGTTACCGCGGAG
GGAGCCACCTTCGTGTGGGGCTGCGGGTCGCAGGGGCGGTTAGGCTCCGG
GTCGCATGCGGACGTCGAAACTCCTCGGCAGGTGGGTCATTGGGCGCGTC
GTTTCTCGTGTCAGTAAGGGGGGTGGGGGGAGGGCAAGGGCATAGCATCA
TAAGTAACAAGTGAGCCTCCATAGGTGTAGCTTGGACGATCTTCCCTCTT
GAAAAGGTGGGACCCCAACGCTAGCTCTAGGTTTCTGCAATCTTAGTTTT
TTAGAGGGCAAGGGCGGGGGGCGGGGCGGGGCGGGGGGGTGCAGGCGTGT
AGGATCGGGTTGCCGTTGGCAGTTGAAATTGTTTTTGGGACGCCTGCGCG
ATTGTCAAGGTTTTTGCCCTGTTCGACCTCCCTTCCAGATTTTTCGGCGG
CACAAAGGGCACAACACGACCGACCGTGTCTTGTGGCTGATATGATACAG
TAGATATCGCTTTGTCGTAGTGGACTCGGGCGGCAGCAGGTTTGTTTTGG
GTGTTAAAAAAAGCGATTTGTTGTGGTTCGGGGTGTGTGACGTTCGGCGT
GCGCCGCGACTCGCGAATGGCACCGCCTGCCGACTTTTACCATCGCGGGT
TCCGCCGACTTCTTTTGGACGACTCAGCAATCAGCGTAGCCGTTGTTCAC
TTAGCGATACACAACCGTATGTGCTGAGGCCCCATGTAGCAGTCGGAGTC
GCCCCGCGAACCTTTGCTGGCCACTACTATTAGGCGAGGGCAAAAGCCGG
TGGCAACTCTAATCTGGTGCGCGGTGGGGGGGCTTGAAGCGAGATATTGA
TTTAGTGGAAATACCCCCGCGGTGATTACGCCCTCGTGTTCAGCTCCAAT
TCTCTCCCCCAGCTAAATTCGTGGAGGACGTGGAGGGGAGGAGAATAAGG
AATGAAATTTCAACTTGTAGACCTGCAAAGATTATATGACCAAACTTGGG
GGGTAAAATATGCGGTAGTAAATAGAGTATAAACGAAACACTCGGCGGGG
AGGAGGAAAGCACACACAATAATTCGAAGGAAGAGAAAAAACCTGGCGAA
GAGAGGAAGGAGGTTGTGGTGCGTATGTCACATTTCCCCCTCTTGCCTTC
AACATAATTTCCCTTTTAGTCGAGTTGGGTCCCTTTTTTTTATGCGCGCG
AAGTCTGTGCTTGAGTCAGCCAGCCCTTTCATTTTCGTCCCCTTCCCCCC
TCTTCCCCTCACGAAACCACTCATATTCCTTTCCCCCCCAAAACCTCAAC
CCCCTCCGTGCGCAAAATAAACGAAAAAAAAAACAACCACAAAAATCAAA
GGTGCGCGCGTTGGCGTCCCGCGCGATCCGGATCCGCCAAGCGGCCGCCG
GGCGCGCGCACACCATCTTCCTCTCGGACTCCGGCACGGTGTACAGCTGC
GGCTCCGACGAGTTCGGGCAGCAAGGCCGGGCCTCTCCTGTCGCTCCTCC
CCCCCCGGCGTCCGCCTCGGCTGCCGAGGGACGAGGCGGAAAACACCGCA
CCAGCAGCGGTAGCGGTAGCAGTAGCAGCGGTGTTGGTGGCGATGGGGTC
GACACCCGCGGCGGATCTTCCCCATCCCGCCTCCCGGATTCCCTCGCTCC
TCTGGTTGTTCCTGTGGCCGGCGGCCTTCGGGTGGAAAGCGTAGCGGTAG
GGGATGATCACTGTACGGTGATAGCCGCTCCGAGCTTGGCAAACCCCGGT
CCGCGCAGCAGCAGCGGTGGTGTCACGGGCGTGGAGGAAGGGAGGAGAAG
GGTGTTCATGTGGGGGCTTAACGCGGCGGGGCAGTGCGTGCAGGGGCGGG
CGGCCGAGATCGTGGTGGCGCCACAGGAGGCGGAGTTGTTGAGCGGCGCG
CGGGCGGTGGGATGCGGGGCAGGGCACACTATGGTCGTGCTGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig12493:354..2848+

>mRNA_S-dermatodea_contig12493.1544.1 ID=mRNA_S-dermatodea_contig12493.1544.1|Name=mRNA_S-dermatodea_contig12493.1544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2550bp|location=Sequence derived from alignment at S-dermatodea_contig12493:354..2848+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTGGCTTGCGGCCGTGAGCACTCCCTCGCGTTAGCGCGCCCACGAAGGGA
GGAAGGCTCTTGTTCTCGGCAGGGAACCGCTGCCCCGGCGTCCTCGGCGC
CCACGGTTAATCTGCTCTTCTCCTGGGGACGGGCGGGGTGCGGTAGACTC
GGCAGATCGCCGCCGCCCGGGCAAGCGCCGCCGTCGCTGCCGCCGCCGCC
GCCGCCGCAGGACCCGCAGCCTTCAACACCGCGAACAAGCAGCGCGTTGC
TCCCGCTCGCAGCCAGCCTCGCTCGAAACGTTAGCGGCGGCGGTAGCGGC
GGCGCCAGCAGTGCCGGCGGAGGTCGGGAGGCCTCCGGATACCACCTGGC
GCACGCGCACGCCTCCTCGGATCAGAAACCCCCCTTGAAGCAGTTCCCCC
CGCCGAGCCGTTTCAGCATGCCGGCGCTGGTCGACGGCGACTGGTCGTAC
CGCGTGAACGACCACCGGAGAGACGGGGCCTCGCTCATACCCGTGTGCGG
CGGCGGCGGCGGCGGCGGCGCCCGCTCTCGAGGCGTTGGGGGGCGGGGGC
CCATTTCGATCGCCGCGGGATGGCGACATTCTGTCGCCGTTACCGCGGAG
GGAGCCACCTTCGTGTGGGGCTGCGGGTCGCAGGGGCGGTTAGGCTCCGG
GTCGCATGCGGACGTCGAAACTCCTCGGCAGGTGGCTTGCGGCCGTGAGC
ACTCCCTCGCGTTAGCGCGCCCACGAAGGGAGGAAGGCTCTTGTTCTCGG
CAGGGAACCGCTGCCCCGGCGTCCTCGGCGCCCACGGTTAATCTGCTCTT
CTCCTGGGGACGGGCGGGGTGCGGTAGACTCGGCAGATCGCCGCCGCCCG
GGCAAGCGCCGCCGTCGCTGCCGCCGCCGCCGCCGCCGCAGGACCCGCAG
CCTTCAACACCGCGAACAAGCAGCGCGTTGCTCCCGCTCGCAGCCAGCCT
CGCTCGAAACGTTAGCGGCGGCGGTAGCGGCGGCGCCAGCAGTGCCGGCG
GAGGTCGGGAGGCCTCCGGATACCACCTGGCGCACGCGCACGCCTCCTCG
GATCAGAAACCCCCCTTGAAGCAGTTCCCCCCGCCGAGCCGTTTCAGCAT
GCCGGCGCTGGTCGACGGCGACTGGTCGTACCGCGTGAACGACCACCGGA
GAGACGGGGCCTCGCTCATACCCGTGTGCGGCGGCGGCGGCGGCGGCGGC
GCCCGCTCTCGAGGCGTTGGGGGGCGGGGGCCCATTTCGATCGCCGCGGG
ATGGCGACATTCTGTCGCCGTTACCGCGGAGGGAGCCACCTTCGTGTGGG
GCTGCGGGTCGCAGGGGCGGTTAGGCTCCGGGTCGCATGCGGACGTCGAA
ACTCCTCGGCAGGTGCGCGCGTTGGCGTCCCGCGCGATCCGGATCCGCCA
AGCGGCCGCCGGGCGCGCGCACACCATCTTCCTCTCGGACTCCGGCACGG
TGTACAGCTGCGGCTCCGACGAGTTCGGGCAGCAAGGCCGGGCCTCTCCT
GTCGCTCCTCCCCCCCCGGCGTCCGCCTCGGCTGCCGAGGGACGAGGCGG
AAAACACCGCACCAGCAGCGGTAGCGGTAGCAGTAGCAGCGGTGTTGGTG
GCGATGGGGTCGACACCCGCGGCGGATCTTCCCCATCCCGCCTCCCGGAT
TCCCTCGCTCCTCTGGTTGTTCCTGTGGCCGGCGGCCTTCGGGTGGAAAG
CGTAGCGGTAGGGGATGATCACTGTACGGTGATAGCCGCTCCGAGCTTGG
CAAACCCCGGTCCGCGCAGCAGCAGCGGTGGTGTCACGGGCGTGGAGGAA
GGGAGGAGAAGGGTGTTCATGTGGGGGCTTAACGCGGCGGGGCAGTGCGT
GCAGGGGCGGGCGGCCGAGATCGTGGTGGCGCCACAGGAGGCGGAGTTGT
TGAGCGGCGCGCGGGCGGTGGGATGCGGGGCAGGGCACACTATGGTCGTG
CTGTGAGTGCGCGCGTTGGCGTCCCGCGCGATCCGGATCCGCCAAGCGGC
CGCCGGGCGCGCGCACACCATCTTCCTCTCGGACTCCGGCACGGTGTACA
GCTGCGGCTCCGACGAGTTCGGGCAGCAAGGCCGGGCCTCTCCTGTCGCT
CCTCCCCCCCCGGCGTCCGCCTCGGCTGCCGAGGGACGAGGCGGAAAACA
CCGCACCAGCAGCGGTAGCGGTAGCAGTAGCAGCGGTGTTGGTGGCGATG
GGGTCGACACCCGCGGCGGATCTTCCCCATCCCGCCTCCCGGATTCCCTC
GCTCCTCTGGTTGTTCCTGTGGCCGGCGGCCTTCGGGTGGAAAGCGTAGC
GGTAGGGGATGATCACTGTACGGTGATAGCCGCTCCGAGCTTGGCAAACC
CCGGTCCGCGCAGCAGCAGCGGTGGTGTCACGGGCGTGGAGGAAGGGAGG
AGAAGGGTGTTCATGTGGGGGCTTAACGCGGCGGGGCAGTGCGTGCAGGG
GCGGGCGGCCGAGATCGTGGTGGCGCCACAGGAGGCGGAGTTGTTGAGCG
GCGCGCGGGCGGTGGGATGCGGGGCAGGGCACACTATGGTCGTGCTGTGA
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