prot_S-dermatodea_contig12463.1527.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12463.1527.1
Unique Nameprot_S-dermatodea_contig12463.1527.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length89
Homology
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: D7G6W1_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W1_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 4.770e-35
Identity = 64/89 (71.91%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    1 MLTLVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            MLTL+EVLGPELDKKAT IYRHN+ GIVEGVIKTSAI+Q+EAEDVAR+GVKI  G E+D GW +FSL Y+V +P+S VVT + L++YRR
Sbjct:  573 MLTLIEVLGPELDKKATVIYRHNVMGIVEGVIKTSAILQDEAEDVARIGVKIFGGSESDTGWDVFSLEYDVGAPISTVVTKEVLVEYRR 661          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 2.900e-26
Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 0
Query:    1 MLTLVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVA-RVGVKILSGLE----------TDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            MLTL+EVLGPELDKKAT I RHN+ GIVEGVIKTSAI+Q+EA DVA R+GVKI +G +          + +GW +FSL Y+V +PVS VVT + L++Y R
Sbjct: 1404 MLTLIEVLGPELDKKATVICRHNVMGIVEGVIKTSAILQDEAGDVAIRIGVKISTGYDFVRVAMPASPSLRGWDVFSLKYDVGAPVSTVVTEEVLVEYPR 1503          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: D7G6W3_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W3_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-24
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MLTLVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKG 61
            MLTL+EVLGPELDKKAT IYRHN+ GIVEG IKTSAI+Q+EAEDVAR+GVKI  G E+D G
Sbjct:   70 MLTLIEVLGPELDKKATVIYRHNVMGIVEGAIKTSAILQDEAEDVARIGVKIFGGSESDTG 130          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: A0A7S1XYE1_9STRA (Spindle pole body component n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYE1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 7.450e-17
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    3 TLVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVA-RVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            TL+  LGPEL K+A+ +YRHNLTG V+  +++S   +  + DV  RVGV++L G   D GW  F+L Y V  P+  V+   A + YRR
Sbjct:   63 TLINTLGPELSKRASQVYRHNLTGAVDSAVRSSNAARVYSNDVLERVGVRLLEGSPGDTGWDTFTLDYYVSQPLDGVINPAAQLSYRR 150          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: A0A367KS80_RHIST (Spindle pole body component n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KS80_RHIST)

HSP 1 Score: 82.8 bits (203), Expect = 1.520e-16
Identity = 34/84 (40.48%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    4 LVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDY 87
            L++VLGP+LDK A+ ++RH+LTGI+E  I++S    ++ E ++R+ V++L   + D GW +FSL Y V++P++ V+   A++ Y
Sbjct:  459 LMDVLGPQLDKPASTLFRHHLTGILETAIRSSNAQYDDPEILSRLNVRLLEAQKNDSGWDVFSLDYHVDTPINTVINPNAMIQY 542          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: A0A7R9UD18_9STRA (Spindle pole body component n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD18_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.910e-16
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    4 LVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVA-RVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            L+  +GPEL K+A+ +YRHNLTG V+G ++ S      + DV  RVGV++L     D GW++F+L Y V  P+  V+   A + YRR
Sbjct:   50 LINAIGPELSKRASQVYRHNLTGAVDGAVRGSNAAFIYSSDVLERVGVRLLEASPGDSGWEVFTLDYYVSKPLDGVINPMAQLSYRR 136          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: K3WEA1_GLOUD (Spindle pole body component n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA1_GLOUD)

HSP 1 Score: 80.1 bits (196), Expect = 1.360e-15
Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    4 LVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            L+++LGPEL K+AT IYRH LT ++E  + +S    E  + +AR+ V++L     D GW IFSL Y++ SPV+ V+   A+  Y+R
Sbjct:  675 LMDLLGPELSKRATQIYRHTLTNVLETALNSSNAKFETTDILARLDVELLQASTGDSGWDIFSLHYKLTSPVNTVINDAAMAQYQR 760          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: A0A835YR49_9STRA (Spindle pole body component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR49_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.370e-15
Identity = 35/85 (41.18%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    5 VEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            ++ LG EL K+A+ +Y HNL+GIV+  ++  A+  E  E + RV VK+L     + GW +FSL Y V++P++AV+ + A++ YRR
Sbjct:  649 LDTLGVELGKRASTVYHHNLSGIVDSALRGGAVQYEAPEILDRVAVKLLDAGHNETGWDVFSLCYTVQAPLTAVIHASAMLQYRR 733          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: G4YTK8_PHYSP (Spindle pole body component n=6 Tax=Phytophthora TaxID=4783 RepID=G4YTK8_PHYSP)

HSP 1 Score: 78.6 bits (192), Expect = 4.730e-15
Identity = 32/86 (37.21%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    4 LVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            L+++LGPEL K+ + +YRH LT ++E  +  S    E A+ + R+ V++L G   D GW IFSL Y +++PV++V+ + +++ Y++
Sbjct:  599 LMDLLGPELSKRGSQVYRHTLTNVLETALNASNAKFESADILGRLDVELLQGSSADTGWDIFSLHYNLQAPVNSVIPASSMLQYQQ 684          
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Match: A0A5D6XT65_9STRA (Spindle pole body component n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT65_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.740e-15
Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    4 LVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGVKILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR 89
            L+++LGPEL K+A+ IYRH ++ ++E  + +S    E A+ +AR+ V++L     D GW IFSL Y++ SPV+ V+   A++ Y+R
Sbjct:  645 LMDLLGPELSKRASQIYRHTISNVLETALNSSNAKFESADILARLDVELLHASSGDTGWDIFSLHYKLTSPVNTVINEAAMVQYQR 730          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12463.1527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W1_ECTSI4.770e-3571.91Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
D7G720_ECTSI2.900e-2660.00NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G6W3_ECTSI1.230e-2478.69Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A7S1XYE1_9STRA7.450e-1744.32Spindle pole body component n=2 Tax=Phaeomonas par... [more]
A0A367KS80_RHIST1.520e-1640.48Spindle pole body component n=1 Tax=Rhizopus stolo... [more]
A0A7R9UD18_9STRA6.910e-1642.53Spindle pole body component n=1 Tax=Pinguiococcus ... [more]
K3WEA1_GLOUD1.360e-1543.02Spindle pole body component n=1 Tax=Globisporangiu... [more]
A0A835YR49_9STRA1.370e-1541.18Spindle pole body component n=1 Tax=Tribonema minu... [more]
G4YTK8_PHYSP4.730e-1537.21Spindle pole body component n=6 Tax=Phytophthora T... [more]
A0A5D6XT65_9STRA4.740e-1540.70Spindle pole body component n=1 Tax=Pythium brassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042241Gamma-tubulin complex, C-terminal domain superfamilyGENE3D1.20.120.1900coord: 1..89
e-value: 9.9E-7
score: 30.2
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 3..89
e-value: 3.7E-13
score: 49.6
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 2..88
NoneNo IPR availablePANTHERPTHR19302:SF14GAMMA-TUBULIN COMPLEX COMPONENT 3coord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12463contigS-dermatodea_contig12463:115..1135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12463.1527.1mRNA_S-dermatodea_contig12463.1527.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12463 103..1135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12463.1527.1 ID=prot_S-dermatodea_contig12463.1527.1|Name=mRNA_S-dermatodea_contig12463.1527.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp
MLTLVEVLGPELDKKATHIYRHNLTGIVEGVIKTSAIVQEEAEDVARVGV
KILSGLETDKGWQIFSLTYEVESPVSAVVTSQALMDYRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042241GCP_C_sf
IPR040457GCP_C
IPR007259GCP