prot_S-dermatodea_contig12453.1525.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12453.1525.1
Unique Nameprot_S-dermatodea_contig12453.1525.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length146
Homology
BLAST of mRNA_S-dermatodea_contig12453.1525.1 vs. uniprot
Match: D7FPK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK9_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.230e-38
Identity = 106/183 (57.92%), Postives = 115/183 (62.84%), Query Frame = 0
Query:    1 MRAYQVKEKSALHLLFGLPARAIRYSLGFQMFGFREKASRQXXXXXXXXXXXXXXXXXXXX--------------------------------------RADPSAATASGEAAAKSAPRGRVRLSGFGQVGMGGSVALCDPASGLAFAMVTNKVETGRKSSSTVLSLVCEELGIGDPSNFFED 145
            MRAYQVKE S+LHL FGLP   +RYSLG+QMFGFREK   Q      XXXXXXXXXXXXXX                                       +D      + +AAA  A RGRVRLSG G VGMGGSVALCDPASGLAFAMVTNKV TGR+ S+ VLSLVCEELGIGDPS+FFED
Sbjct:  964 MRAYQVKESSSLHLFFGLPMGGVRYSLGYQMFGFREKPKLQQLQRRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXESDDGTVPLT-DAAAAPATRGRVRLSGLGHVGMGGSVALCDPASGLAFAMVTNKVATGRECSTAVLSLVCEELGIGDPSHFFED 1145          
BLAST of mRNA_S-dermatodea_contig12453.1525.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 3.780e-37
Identity = 94/185 (50.81%), Postives = 102/185 (55.14%), Query Frame = 0
Query:    1 MRAYQVKEKSALHLLFGLPARAIRYSLGFQMFGFREKASRQXXXXXXXXXXXXXXXXXXXX--------------------------------------RADPSAA--TASGEAAAKSAPRGRVRLSGFGQVGMGGSVALCDPASGLAFAMVTNKVETGRKSSSTVLSLVCEELGIGDPSNFFED 145
            MRAYQVKE S+LHL FGLP   +RYSLG+QMFGFREK   Q                 XXX                                       +D      T +       APRGRVRLSG G VGMGGSVALCDPASGLAFAMVTNKV TGR+ S+ VLSLVCEELGIGDPS+FFED
Sbjct: 1393 MRAYQVKESSSLHLFFGLPMGGVRYSLGYQMFGFREKPKPQQLQRRHEPASGASSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDGTVPMTDAAXXXXXPAPRGRVRLSGLGHVGMGGSVALCDPASGLAFAMVTNKVATGRECSTAVLSLVCEELGIGDPSHFFED 1577          
BLAST of mRNA_S-dermatodea_contig12453.1525.1 vs. uniprot
Match: A0A835ZC02_9STRA (Beta-lactamase/transpeptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC02_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.860e-15
Identity = 50/142 (35.21%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    2 RAYQVKEKSALHLLFGLPARAIRYSLGFQMFGFREKASRQXXXXXXXXXXXXXXXXXXXXRADPSAATASGEAAAKSAPRGRVRLSGFGQVGMGGSVALCDPASGLAFAMVTNKVETGRKSSSTVLSLVCEELGIGDPSNFF 143
            R+Y   + SA+H LFGL  R +RY LG Q+FGF+E+                                    A     P  R        VG+GGS ALCDPA+G++FAM  N++  GR++++ V  LVC+ELG+G+P   F
Sbjct:  860 RSYAASDSSAMHRLFGLRNR-MRYGLGCQLFGFKEEGPEGARRTRLSGFGTTSRSRTHSLXXXXXXXHTHSAAPLSHTPCAR-------HVGVGGSAALCDPATGVSFAMTVNRIRPGRRATTQVFELVCKELGMGEPVPLF 993          
BLAST of mRNA_S-dermatodea_contig12453.1525.1 vs. uniprot
Match: A0A6V1QAP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QAP5_HETAK)

HSP 1 Score: 65.9 bits (159), Expect = 5.140e-11
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   82 GRVRLSGFGQVGMGGSVALCDPASGLAFAMVTNKVETGRKSSSTVLSLVCEELGIGDPSNFF 143
            G VR +  G  G  GS+A CDP +GL FAM  NK+  G + +  +L LVC+ELG G P + F
Sbjct:   65 GHVRFTAMGHTGASGSIAFCDPVTGLVFAMTVNKIVEGHQGTKAILELVCKELGCGTPVSVF 126          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12453.1525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPK9_ECTSI4.230e-3857.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBB7_9PHAE3.780e-3750.81FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZC02_9STRA5.860e-1535.21Beta-lactamase/transpeptidase-like protein n=1 Tax... [more]
A0A6V1QAP5_HETAK5.140e-1146.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.710.30coord: 19..134
e-value: 4.6E-8
score: 34.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12453contigS-dermatodea_contig12453:3335..4887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12453.1525.1mRNA_S-dermatodea_contig12453.1525.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12453 1638..4956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12453.1525.1 ID=prot_S-dermatodea_contig12453.1525.1|Name=mRNA_S-dermatodea_contig12453.1525.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=146bp
MRAYQVKEKSALHLLFGLPARAIRYSLGFQMFGFREKASRQQQQQQTWSS
NTSSAISASSSRADPSAATASGEAAAKSAPRGRVRLSGFGQVGMGGSVAL
CDPASGLAFAMVTNKVETGRKSSSTVLSLVCEELGIGDPSNFFED*
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