prot_S-dermatodea_contig12425.1512.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12425.1512.1
Unique Nameprot_S-dermatodea_contig12425.1512.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length250
Homology
BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 3.580e-127
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 0
Query:   13 VHTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKCRMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVEGLGTGQIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQQGQ 232
            VHTAVSG   +DG+DD +GRWRVRGNEFSLTV+R+S+ R L+DL+YVGVLKKFS  +EGSVIEGQMDPAVVGKFKMTP+ESSMASDLKKAAEANDS KYVAPKY K+AIAG+WVLMWQDTGAVFRL L E+ QFES++GLG+GQ+GGRWN W  +RMF+TVVRSKSHGVQ+ GDHMFWGT + GPPDS+IPLKISGYVMYGFLEPTCVGRFIMRRSQ+G+
Sbjct:   69 VHTAVSG---TDGKDDHAGRWRVRGNEFSLTVNRKSQSRFLDDLKYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLEPTCVGRFIMRRSQEGR 285          
BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A835YV66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV66_9STRA)

HSP 1 Score: 206 bits (524), Expect = 9.670e-63
Identity = 102/223 (45.74%), Postives = 139/223 (62.33%), Query Frame = 0
Query:   13 VHTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKCRMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDT----GAVFRLLLKEEGQFESVEGLGTG-QIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQQ 230
             HTA+   NN      + GRWR R NEF L++  +++  M EDLRY+G ++++S  I GSV EGQMDP VVG F+MTP+ +SM++DL   A   D  + + P Y K  ++G W+L+        G VF L+L E+G F SV G+G G  + GRWNTWD ++  LTVVR KS G Q++ DH +WG  I G  D   P +I+G +MYG+LEPT +G F M R  Q
Sbjct:   43 AHTAILDGNN------EGGRWRYRANEFQLSITVKNRTGMKEDLRYIGQMQEYSGRIRGSVTEGQMDPFVVGDFQMTPVVASMSTDLMALARRRDEQQSITPLYSKKVLSGPWLLVHSGVSGLRGGVFELMLTEDGGFASVRGVGAGGMLAGRWNTWDREKFILTVVRLKSRGAQMTADHQYWGFKIHG--DGVTPTRITGEIMYGYLEPTSIGCFTMMRPSQ 257          
BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.870e-56
Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 0
Query:   57 RYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVEGLGTGQIGGRWNTWDADRM 169
            RYVGVLKKFS  +EGSVIEGQMDPAVVGKFKMTP+ESSMASDLKKAAEANDS KYVAPKY K+AIAG+WVLMWQDTGAVFRL L E+ QFES++GLG+GQ+GGRWN W  +R+
Sbjct:  229 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNR2_ECTSI3.580e-12780.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV66_9STRA9.670e-6345.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LDX9_9PHAE1.870e-5681.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12425contigS-dermatodea_contig12425:645..3405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12425.1512.1mRNA_S-dermatodea_contig12425.1512.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12425 117..5718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12425.1512.1 ID=prot_S-dermatodea_contig12425.1512.1|Name=mRNA_S-dermatodea_contig12425.1512.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=250bp
MSPSPRIELLVEVHTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKC
RMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLK
KAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVE
GLGTGQIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDS
EIPLKISGYVMYGFLEPTCVGRFIMRRSQQGQGDGDMDATSSGPPDALP*
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