mRNA_S-dermatodea_contig12425.1512.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12425.1512.1
Unique NamemRNA_S-dermatodea_contig12425.1512.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.850e-116
Identity = 177/220 (80.45%), Postives = 201/220 (91.36%), Query Frame = 1 
Query:  565 VHTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKCRMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVEGLGTGQIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQQGQ 1224
            VHTAVSG   +DG+DD +GRWRVRGNEFSLTV+R+S+ R L+DL+YVGVLKKFS  +EGSVIEGQMDPAVVGKFKMTP+ESSMASDLKKAAEANDS KYVAPKY K+AIAG+WVLMWQDTGAVFRL L E+ QFES++GLG+GQ+GGRWN W  +RMF+TVVRSKSHGVQ+ GDHMFWGT + GPPDS+IPLKISGYVMYGFLEPTCVGRFIMRRSQ+G+
Sbjct:   69 VHTAVSG---TDGKDDHAGRWRVRGNEFSLTVNRKSQSRFLDDLKYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLEPTCVGRFIMRRSQEGR 285
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A835YV66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV66_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.840e-56
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 1 
Query:  568 HTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKCRMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDT----GAVFRLLLKEEGQFESVEGLGTG-QIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDSEIPLKISGYVMYGFLEPTCVGRFIMRRSQQ 1218
            HTA+   NN      + GRWR R NEF L++  +++  M EDLRY+G ++++S  I GSV EGQMDP VVG F+MTP+ +SM++DL   A   D  + + P Y K  ++G W+L+        G VF L+L E+G F SV G+G G  + GRWNTWD ++  LTVVR KS G Q++ DH +WG  I G  D   P +I+G +MYG+LEPT +G F M R  Q
Sbjct:   44 HTAILDGNN------EGGRWRYRANEFQLSITVKNRTGMKEDLRYIGQMQEYSGRIRGSVTEGQMDPFVVGDFQMTPVVASMSTDLMALARRRDEQQSITPLYSKKVLSGPWLLVHSGVSGLRGGVFELMLTEDGGFASVRGVGAGGMLAGRWNTWDREKFILTVVRLKSRGAQMTADHQYWGFKIHG--DGVTPTRITGEIMYGYLEPTSIGCFTMMRPSQ 257
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: D7FNR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR3_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 9.020e-53
Identity = 124/259 (47.88%), Postives = 153/259 (59.07%), Query Frame = -2 
Query: 2573 SGLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSAPLGDRGGI----------------EDIICYRRNT--PFANGGGAKTTGKGAALLVGMPVITSPEGVRFWLELCGVSKRRDICEETYAAFGTPPATRPQEAHVEKVTAVASSGLRSRAAVDSGDRGCDDGVTARSESRDGLPYGQAWFETTMSKLRSLDGSG--VAGVHVMAPSPAARRRAGALADAGVFGPPR 3289
            SG LPKG+A WAVANP+ EAD AG+DRVR+KVELGA+VILTQPPLAWE FER +QG  ASGALG +      G+                       R+T  P A   G +     A +LVG+PVITSP+G+RFWL+LCG+  +  +C++ + AFG P +             VA +G     A  +G++      TA + S    PYGQ W ETTM KL+SLDGSG  VAGVH+MAP  A RRRA  LA  G FG PR
Sbjct:  215 SGRLPKGLALWAVANPLAEADEAGVDRVRKKVELGAEVILTQPPLAWELFERWLQGVHASGALGRSAAARNAGLTKPGEGTDATVKIFETSGSTGEERSTRHPLAAAEGRRGGDPAARILVGLPVITSPKGLRFWLDLCGLHDKPGVCKQVFEAFGQPSSV------------VARTGSEEPHAHPAGEKQ----ATAVAGSPPS-PYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIELAATGFFGKPR 456
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A6H5L748_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L748_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 9.980e-52
Identity = 125/263 (47.53%), Postives = 151/263 (57.41%), Query Frame = -2 
Query: 2573 SGLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSAPLGDRGGIE--------------------DIICYRRNTPFANG--GGAKTTGKGAALLVGMPVITSPEGVRFWLELCGVSKRRDICEETYAAFGTPPATRPQEAHVEKVTAVASSGLRSRAAVDSGDRGCDDGVTARSESRDGLPYGQAWFETTMSKLRSLDGSG--VAGVHVMAPSPAARRRAGALADAGVFGPPR 3289
            SG LPKG+A WAVANP+TE D AGIDRVR+KVELGA+VILTQPPLAWE FER +QG   SGALG +      G+                     +    RR T  A G  GG  T    A +LVG+PVIT+P+G+RFWL LCG+     +C++ + AFG P +             VA +G        +G++     V   + S    PYGQ W ETTM KL+SLDGSG  VAGVH+MAP  A RRRA  LA AG FG PR
Sbjct:  213 SGHLPKGLALWAVANPLTEVDEAGIDRVRKKVELGAEVILTQPPLAWELFERWLQGVHTSGALGGSAAARNDGLAKPGEGTDATMKMFEASGSTGEERSTRRPTAAAEGQRGGDST----ARILVGLPVITAPKGLRFWLNLCGLHDNPGVCKQAFEAFGHPSSV------------VARTGTEEPHGHPAGEKQAS-AVAGSTPS----PYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIQLAAAGFFGEPR 454
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.160e-50
Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = 1 
Query:  697 RYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLKKAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVEGLGTGQIGGRWNTWDADRM 1035
            RYVGVLKKFS  +EGSVIEGQMDPAVVGKFKMTP+ESSMASDLKKAAEANDS KYVAPKY K+AIAG+WVLMWQDTGAVFRL L E+ QFES++GLG+GQ+GGRWN W  +R+
Sbjct:  229 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A061R353_9CHLO (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R353_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 5.740e-10
Identity = 41/121 (33.88%), Postives = 57/121 (47.11%), Query Frame = -2 
Query: 2924 GLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSAPLGDRGGIEDIICYRRNTPFANGGGAKTTGKGAALLVGMPVITSPEGVRFWLELCG 3286
            G LP  +  WAV NP+ E DA    R+RRK+E GA+V++TQPPL W+ F+R    A   G L    L                                 +VG+P+++S   + FWL+LCG
Sbjct:  100 GNLPGSLRLWAVENPLLEYDA---QRLRRKIEAGAEVVVTQPPLDWDSFQRWADDADRLGLLEQCQL---------------------------------VVGLPMLSSAGNLAFWLQLCG 184
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A835YF65_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YF65_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 3.940e-9
Identity = 48/133 (36.09%), Postives = 60/133 (45.11%), Query Frame = -2 
Query: 2924 SGLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGAL-----------GSAPLGDRGGIEDIICYRRNTPFANGGGAKTTGKGAALLVGMPVITSPEGVRFWLELCG 3289
            +G +P     WAVANP TE  A  ++R   KVELGA V+LTQPPL WE +   +  A   G L            SAP  +  G +                   T  GA LLVG P+ +S   + FWL L G
Sbjct:  197 AGAIPPDTQLWAVANPNTERGAGLLER---KVELGAQVVLTQPPLDWEAYLAWLGDAERRGLLLPALPSSSAPSPSAPASEAAGADXXXXXXXXXXXT----PSPTDAGARLLVGHPMASSAGNLSFWLALSG 322
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A2P6TC01_CHLSO (Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC01_CHLSO)

HSP 1 Score: 66.2 bits (160), Expect = 3.680e-7
Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = -2 
Query: 2921 GLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSAPLGDRGGIEDIICYRRNTPFANGGGAKTTGKGAALLVGMPVITSPEGVRFWLELCGV 3286
            G LP  ++ WAV NPM       +DR+++K ++GA+V+LTQPPL WE                                 R   +A    A+   +   +++G+PV+ S   + FWL LCGV
Sbjct:  977 GYLPPALSLWAVENPMLSP----VDRLQQKADVGAEVVLTQPPLLWE---------------------------------RTAAWAEEAAARRVSEHIKVVLGLPVVPSVGNLDFWLRLCGV 1061
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A2K3CVC3_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CVC3_CHLRE)

HSP 1 Score: 64.3 bits (155), Expect = 7.960e-7
Identity = 43/126 (34.13%), Postives = 61/126 (48.41%), Query Frame = -2 
Query: 2924 GLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSA-PLGDRGGIEDIICYRRNTPFANGGGAKTTGKGAA----LLVGMPVITSPEGVRFWLELCG 3286
            G +P     W VANP TE  A  ++R   K ELGA+ +LTQPPL WE +   ++ AR  G L    P G+           R+T  ++ G        +A    L+VG P+ +S   + FW+ L G
Sbjct:  270 GYIPPCTQLWVVANPNTERGAGLLER---KTELGANAVLTQPPLDWEAYLAWLEDARRRGLLNEQLPPGNS----------RSTSLSSSGXXXXXXXXSAGPLRLIVGHPMASSAANLSFWVSLAG 382
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BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Match: A0A835WUH7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WUH7_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 1.020e-6
Identity = 44/142 (30.99%), Postives = 68/142 (47.89%), Query Frame = -2 
Query: 2876 SGLLPKGIAFWAVANPMTEADAAGIDRVRRKVELGADVILTQPPLAWEPFER*VQGARASGALGSAPLGDRGGIEDIICYRRNTPFANGGGAKTTGKGAALLVGMPVITSPEGVRFWLELCG----VSKRRDICEETYAAFG 3289
            +G +P     W VANP TE  A  ++R   K ELGA+ +LTQPPL W  +   ++ AR+ G L      ++  +        +T      G+ T G    L+VG P+ +S   + FW+ L G    V+ R+ + +   A  G
Sbjct:  258 AGYIPPSTQLWVVANPNTERGAGLLER---KSELGANAVLTQPPLDWNAYLAWLEDARSRGLLN-----EQLPMPGSSSSSSSTGXXXXXGSSTGGP-VRLIVGHPMASSAANLSFWVSLAGCGGSVAARQLVADAMRAEAG 390
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12425.1512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FNR2_ECTSI2.850e-11680.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV66_9STRA3.840e-5645.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FNR3_ECTSI9.020e-5347.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L748_9PHAE9.980e-5247.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LDX9_9PHAE1.160e-5081.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061R353_9CHLO5.740e-1033.88Methylenetetrahydrofolate reductase (NAD(P)H) n=1 ... [more]
A0A835YF65_9CHLO3.940e-936.09Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2P6TC01_CHLSO3.680e-730.33Ribonuclease Z n=1 Tax=Chlorella sorokiniana TaxID... [more]
A0A2K3CVC3_CHLRE7.960e-734.13Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A835WUH7_9CHLO1.020e-630.99Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12425contigS-dermatodea_contig12425:117..5718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-01_004560.1
Exons7
Model size3290
Cds size750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924247.589672-UTR-S-dermatodea_contig12425:116..6441622924247.589672-UTR-S-dermatodea_contig12425:116..644Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 117..644 +
1694079122.9251292-UTR-S-dermatodea_contig12425:116..6441694079122.9251292-UTR-S-dermatodea_contig12425:116..644Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 117..644 +
1622924247.6565604-UTR-S-dermatodea_contig12425:3405..52561622924247.6565604-UTR-S-dermatodea_contig12425:3405..5256Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 3406..5256 +
1694079122.9881053-UTR-S-dermatodea_contig12425:3405..52561694079122.9881053-UTR-S-dermatodea_contig12425:3405..5256Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 3406..5256 +
1622924247.670256-UTR-S-dermatodea_contig12425:5557..57181622924247.670256-UTR-S-dermatodea_contig12425:5557..5718Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 5558..5718 +
1694079122.9979374-UTR-S-dermatodea_contig12425:5557..57181694079122.9979374-UTR-S-dermatodea_contig12425:5557..5718Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12425 5558..5718 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924247.5986195-CDS-S-dermatodea_contig12425:644..8141622924247.5986195-CDS-S-dermatodea_contig12425:644..814Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 645..814 +
1694079122.9357142-CDS-S-dermatodea_contig12425:644..8141694079122.9357142-CDS-S-dermatodea_contig12425:644..814Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 645..814 +
1622924247.61145-CDS-S-dermatodea_contig12425:1153..13071622924247.61145-CDS-S-dermatodea_contig12425:1153..1307Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 1154..1307 +
1694079122.9448066-CDS-S-dermatodea_contig12425:1153..13071694079122.9448066-CDS-S-dermatodea_contig12425:1153..1307Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 1154..1307 +
1622924247.6216433-CDS-S-dermatodea_contig12425:1603..17821622924247.6216433-CDS-S-dermatodea_contig12425:1603..1782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 1604..1782 +
1694079122.9530818-CDS-S-dermatodea_contig12425:1603..17821694079122.9530818-CDS-S-dermatodea_contig12425:1603..1782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 1604..1782 +
1622924247.6301258-CDS-S-dermatodea_contig12425:2523..26231622924247.6301258-CDS-S-dermatodea_contig12425:2523..2623Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 2524..2623 +
1694079122.9613452-CDS-S-dermatodea_contig12425:2523..26231694079122.9613452-CDS-S-dermatodea_contig12425:2523..2623Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 2524..2623 +
1622924247.6398008-CDS-S-dermatodea_contig12425:2873..29181622924247.6398008-CDS-S-dermatodea_contig12425:2873..2918Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 2874..2918 +
1694079122.9697106-CDS-S-dermatodea_contig12425:2873..29181694079122.9697106-CDS-S-dermatodea_contig12425:2873..2918Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 2874..2918 +
1622924247.6484241-CDS-S-dermatodea_contig12425:3303..34051622924247.6484241-CDS-S-dermatodea_contig12425:3303..3405Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 3304..3405 +
1694079122.9787047-CDS-S-dermatodea_contig12425:3303..34051694079122.9787047-CDS-S-dermatodea_contig12425:3303..3405Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12425 3304..3405 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12425.1512.1prot_S-dermatodea_contig12425.1512.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12425 645..3405 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12425.1512.1

>prot_S-dermatodea_contig12425.1512.1 ID=prot_S-dermatodea_contig12425.1512.1|Name=mRNA_S-dermatodea_contig12425.1512.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=250bp
MSPSPRIELLVEVHTAVSGANNSDGQDDQSGRWRVRGNEFSLTVDRRSKC
RMLEDLRYVGVLKKFSKYIEGSVIEGQMDPAVVGKFKMTPLESSMASDLK
KAAEANDSDKYVAPKYPKSAIAGEWVLMWQDTGAVFRLLLKEEGQFESVE
GLGTGQIGGRWNTWDADRMFLTVVRSKSHGVQISGDHMFWGTNIIGPPDS
EIPLKISGYVMYGFLEPTCVGRFIMRRSQQGQGDGDMDATSSGPPDALP*
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mRNA from alignment at S-dermatodea_contig12425:117..5718+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12425.1512.1 ID=mRNA_S-dermatodea_contig12425.1512.1|Name=mRNA_S-dermatodea_contig12425.1512.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5602bp|location=Sequence derived from alignment at S-dermatodea_contig12425:117..5718+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CCAGACGGCTGCATACTGACTGCTGCATCCTATTTCCTATTTTTTACATT
TTACTTACTGTCTGTACAGCAGTCATGTGCGTAACAGCACGGATCCCACT
TTTTAGAAGACGTGGCAAGACCGTCCGAGAAACTAAGACAACGGGAGATA
TACCAAATATAATACAACAAGTGCTCTTCGTTGCATCAAGACGTCAACTC
AAATGCTCGTTCACCTTCAAGATACTGTCTGAGCTATCACATGTAAACAT
ATTCATTTTACAGGTATCTTCTACTTCTTATTTTGCGTACCGTCCCTGTT
CAAAATTCAAAACACACAGCGGACCAGCCAGCCCTTCAGCGCGCATACTA
GACGGGCAGTTCAAAGAATCCTCGATTACTCTGTAGGTGTCCATAATAAG
AACAAGCCATATCAGTGAAACACGCAATCGTGCAAAAACGCGGTGTTGGG
ATCTGTGGATACGGCCTACGGGTTTTCAAGCTTTTTTCCAAAGCACGTAC
CTGGTATAATATAGTTGTTGCTTTACCCATGAGCCCGTCCCCCCGCATCG
AACTTCTCGTCGAAGTGCACACGGCCGTCAGCGGAGCGAATAACTCTGAC
GGGCAGGACGACCAGTCGGGGCGATGGCGTGTGCGAGGCAACGAGTTCTC
CCTCACGGTCGATCGTCGTTCCAAGTGCAGAATGCTGGAAGATCTAAGGT
GTGGGCGCAGCTTTTCCATCCTCGCTGGGCGCTTCGGGGCGCCGAACAAG
GCGTTCGGCCGTACCTCCTTCGCCTTGGTCTTGCTTGCTGCGTCGGACGG
ACGGTATACATATATATGCCTGCAGCAGTATCTCAGTCACGATCAGTTTA
TGTAGTCCTCGTTGGCTCTGTTGGCGTGCACTTGTCCGTGAGTGCAGCTG
CCTCTGTGTACGTCTTCTTCGTTTCGGCTGTGGTTTAATTTGCTCTCCTC
CTACCCGCGCGTGGTCTTATGCCCGTTTGGATGCGGCATGCGTAAAACAT
AAGAGCCCCCCCCTACCCGTGCGTGATGCGAGTGCAGGTATGTCGGGGTG
CTGAAAAAATTCAGTAAGTACATCGAAGGGAGCGTCATCGAAGGACAGAT
GGACCCTGCAGTGGTCGGCAAGTTCAAGATGACCCCGCTCGAATCCAGCA
TGGCGTCAGATCTTAAAAAGGCCGCCGAGGCCAATGATTCGGTAGGTGCC
TGTGCCGTGCGTGTCTTTCGTCTCCCCGTACGTGCCCTTTACTTGCCGCT
GGTGCTGCATTTTCTGATTTTGATCCACAGCTCATTGCCACTGCACCTCC
GGCAGGGGCCTCCCGTAGCTATCATACACGCTCTCTGTTTTACGCATGGT
GTACAGCACCGGAAATCAGAGAATACGGTAGCTCAGCCTCCACAGTCCAT
TACCCTAGAATACGCAAACCAACACCTCCGTTCCTTCGGATTGCGACCCC
ATCTTCGCGCGACTTCTCGACCGCCTCGGCGCCGCAGGACAAGTACGTGG
CCCCGAAGTATCCCAAGTCGGCCATCGCGGGGGAGTGGGTATTGATGTGG
CAGGACACCGGGGCCGTCTTTAGGCTCCTCCTGAAAGAGGAGGGGCAGTT
CGAGAGCGTCGAAGGGCTAGGCACCGGTCAGATAGGAGGGAGATGGAACA
CATGGGATGCCGACAGGTGCGAATGGTTTCGCCGCATCAGAAGCTGACTA
GTATTACTTCTGTAAAGAATAGAGCCACGGGAGGTTGGTATGGTGATATT
CCGTAAACATGTGGGCATGGAAAGGGAAGGAGCGAGAGCACTCGTATTCC
CGTCGCTGATCGTTGAGTACCAAAAATATTTTTAAAGCTTGGATGCACTT
AACGTTTTGGGACCGAGCGGTGTTAGGCCATCTGCACGCACTATACCTCA
CATGGAACAGGTACAGTACCCGAACGGTGGCTACTATATACTATACTTGT
ACTTCGAAGTATACGATATAACCATCTGCCCGCACTATACCTCACATGAA
ACAAGTACAGTACCCGAACGGTGGACATGACCTAACCCCGAAAACAGGCT
CAGTCCCAAAAGGGTTAATACACACCAGCGTGGGCAGAGGGCAGGATGGG
CCACCACTCCCGTACGGATTCCAGCACGAACGCCAATCGTGCTTCCCGTA
TTGCTGCATTACAGTGAGAATATACGGCGACGGGACCGAATGCCGAAGGA
GCGTGAAGCTTTTTCCCTTGGACAAGAAAGCGAAGGAACCCACGACCATC
TCCTCTCACGTCTGTCAAAGCCTGCTCACCAACCGCTTCAAATGACGCCC
AACGGCTGTACCAATGGCCGCATTCGTTGCGCACGAACAGGGAGCTAGTG
GCTTATCATCTTCGGTGAAACCTTGCTGGCCCCTTTCGTGTTTGACCCTG
CTCCCAGGATGTTCCTTACTGTCGTACGTTCGAAGAGCCACGGGGTGCAG
ATAAGCGGGGATCACATGTTTTGGGGAACGAACATCATCGGGCCGCCCGA
CTCCGAGGTATGTTCACGGGAAATTGCGAACATCCGCCTAGGGTGGGGTG
TGTCTTGAAGACCCCTTTGCCGCAAGACTTTCCTTTAACTGTTCTCCTCG
GACAGCTCTCTCCGCGGGAGGTGCCTTGTGAAGGCTACCCTTCGCAAGTA
TTATGTCGCGCACTCACCCCTGCACGGGAGGCCTGCTGCTTCAACACTCC
AACAATCGTCTCCTGCAATCTCACATTGCGCCCCTCCTCCCCGTTGTTCC
TGGACAGATTCCCTTGAAAATCAGCGGTTACGTCATGTATGGTTTCCTGG
AGGTGAGGGGTGCAAAATAGTCGCATCGGTGGTTTTGCAGGTCAACGTCG
AGGGTTGGGGCAAGTGCCCCCCAGGACGGCTCACTTTTTGCCTGTTGCCA
CACCCTGGATGCACCTGTCCTGCGGGTAAATCGCCCACCCTCTGGATGAA
TGCCTCGTCTGCAGCGGTACATGTGTAGCAGGGTTTTGTTCGATGATTTG
ATGGTACGTTTATCACGGTATGGCGCTCTTTCGCGCCTCGCCACATCCGT
CGCCGTGATTTTCGATAACTTGCGACAAAGCCCCGTCCCCGCCCCCTGAA
GTCTCAGTCCACGCGCACTTCAATCGAGATGAAAACGTGTGCGCCGTCTC
AATCGCCTTTTTCTCGTCCTTCTTTCATGCCGAACAGCCGACCTGCGTTG
GGCGCTTCATCATGCGCCGGAGCCAGCAGGGGCAAGGCGATGGGGACATG
GACGCAACAAGCAGCGGTCCACCGGATGCCCTCCCTTGAGATAATGATGC
GCGCGAGGAAACGTTTGGTTCTGGGCGGCGCGGGGTTTTCATCCCGGCGA
CGCGCTGGATGACTGGCCTTCTCTGCCGTCGCGGTGACGAGCGAGACCAG
AACACGCATTGCTACGACAGCTTGTCGATGGGGGTGTGGTTTTGGTGAAG
GAGGCAGTCTTGACCAAGGATATTGTTTGGGCAGCGTGACCTTGAGCAGT
CAATGAAACGAGGGGGGTGTGACAAGGAGCCAGAGGTGTATGTATATAGG
GCAGGGTCTGTACAGAACGGGTGGAACACTGTTATCGAAGGGTGAGGGAG
TTACAAAGAGAACTGGGCCCGCTACGACATGGGTCGGGCCCGGTTGTATG
GCTAGAGGGCGCATCGCGCGGGGCCGTTTGCTGTATTGTGAATTTCGGAC
AGCGCCACAGGCGTCATGAGTTGCAACTTTTTTACACGTCCATGTACATT
TTTCGGATATAGTTATGACGGAGAACAGGCTACAAAGTTTGGCCTGTGTT
AACACAGGGGAGGGTGCATCTATATTTTTCGGGGGGCAGACGATGTTGTA
ATGCCCTAGGCTCACTTCTAGATTCGGGGCGAGTCGAATATAACGGGTGG
CCGAAGCTGGGACTGAAGCGTTGCGCGTTGTATAGTGAATGGGGCAGAGA
CGCTCGACGCCAATTTTGTACTTCCGGCGTACGATAGAGGCACAAGGAAT
CGGCAGGACGGGCTACTTGCGTTGCTTGTAGCTCTGAGGCGCGACTACAG
GAAGCTCGTGCGTTGAATAATTCAAAAGGATTTCAAAGTCGAAGATAGAG
GCGTGAAGGCAAGGAAGCAGTGCCTGTCTTTGAGAAAGCGACGTGTGAAT
TCCCACCTGGTGGTGGAAGTATAAATTGCCGTGCCGTGAGACGGAGGACT
GCGGTACGACTGGTAACGTTCGCGCTTTCCTCCGCCCGCATATGAGCGAC
TTGCCAGTACCGCTGTGTACATGCGTACACGTAACTCGAAGCACGAAAAA
GAACGAGCCAACGACTACGCCGCTGCTGTGGCTGCTCGCGCCGATGGGCA
CCAGTGCGTTTTGAATCCGAAGCGGCGATAATACTCTTAGTGAACTCGGT
GGCAGAGCAATGGGCGAGCATGTGGGCTTTTCGTGCGTATCTTCGAGATA
ACGACACACCCGCACGACGGCAGCACAAAGCAGAGGAAATATTGTGTATT
GTGCTGGCAAAGCCTTCCGAACCTCCCAAGTATTTTTACCCCGCACAGCC
GCACCAGCAGAGCGCTCGTCTGCATCACACTGGCCGCGGCGGCCCGAAAA
CACCAGCATCAGCAAGCGCGCCCGCTCTTCGCCTGGCAGCCGGGCTTGGA
GCCATCACATGAACGCCCGCCACCCCCGAACCATCGAGACTTCGCAGCTT
CGACATGGTCGTCTCGAACCACGCCTGTCCGTACGGCAGCCCATCTCGCG
ACTCACTCCGAGCGGTGACACCGTCATCACACCCCCTGTCTCCGCTGTCG
ACCGCAGCGCGGCTCCTCAGCCCCGATGAGGCCACGGCTGTGACCTTTTC
CACGTGCGCTTCCTGGGGTCGGGTCGCTGGTGGGGTTCCGAAGGCTGCAT
ACGTTTCCTCGCAGATATCTCGTCGCTTGCTCACCCCGCACAGTTCGAGC
CAGAAGCGGACTCCTTCCGGGGAGGTTATGACCGGCATCCCCACCAGGAG
CGCCGCTCCCTTCCCCGTAGTTTTGGCGCCTCCACCGTTCGCAAATGGCG
TGTTCCGCCGATAACAAATTATGTCTTCGATCCCACCTCGATCTCCAAGT
GGGGCGCTTCCCAGAGCCCCACTTGCACGCGCGCCTTGTAGCCACCTGAC
AAGCGAATTTCAGGAGAATCGTTACATGCAGCAAGCGCGTGCACCTGGAG
TTAAAGAGTAGCCGCCCAACAGCAGCTGGCTCAAACAAAGGCAGAGGGCA
GCATGGTGACCAGCTTGGCATACTCGTCAAGGGTCTCCCGCCACAACGCA
GACTGCCGTCGAAACGCTGCGAAAGCTTTGCCACACGACGTTCGAGGCGC
TTGAAAACTACAGATGCCGAAGCATGTTGAACGACGGAGGCGGGAGAACG
TCAGCAACGCCCTATTTCCCCCCGCCCTCCTGCCTTGAAAGCTCACCGCT
CAAACGGCTCCCAAGCAAGCGGTGGCTGCGTGAGGATAACATCCGCGCCC
AGCTCCACCTTTCGTCGAACGCGATCGATGCCCGCCGCATCCGCCTCAGT
CATAGGGTTTGCCACAGCCCAAAACGCTATCCCTTTGGGCAAGAGACCGC
TG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12425:117..5718+

>mRNA_S-dermatodea_contig12425.1512.1 ID=mRNA_S-dermatodea_contig12425.1512.1|Name=mRNA_S-dermatodea_contig12425.1512.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at S-dermatodea_contig12425:117..5718+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCCCGTCCCCCCGCATCGAACTTCTCGTCGAAGTGCACACGGCCGT
CAGCGGAGCGAATAACTCTGACGGGCAGGACGACCAGTCGGGGCGATGGC
GTGTGCGAGGCAACGAGTTCTCCCTCACGGTCGATCGTCGTTCCAAGTGC
AGAATGCTGGAAGATCTAAGATGAGCCCGTCCCCCCGCATCGAACTTCTC
GTCGAAGTGCACACGGCCGTCAGCGGAGCGAATAACTCTGACGGGCAGGA
CGACCAGTCGGGGCGATGGCGTGTGCGAGGCAACGAGTTCTCCCTCACGG
TCGATCGTCGTTCCAAGTGCAGAATGCTGGAAGATCTAAGGTATGTCGGG
GTGCTGAAAAAATTCAGTAAGTACATCGAAGGGAGCGTCATCGAAGGACA
GATGGACCCTGCAGTGGTCGGCAAGTTCAAGATGACCCCGCTCGAATCCA
GCATGGCGTCAGATCTTAAAAAGGCCGCCGAGGCCAATGATTCGGTATGT
CGGGGTGCTGAAAAAATTCAGTAAGTACATCGAAGGGAGCGTCATCGAAG
GACAGATGGACCCTGCAGTGGTCGGCAAGTTCAAGATGACCCCGCTCGAA
TCCAGCATGGCGTCAGATCTTAAAAAGGCCGCCGAGGCCAATGATTCGGA
CAAGTACGTGGCCCCGAAGTATCCCAAGTCGGCCATCGCGGGGGAGTGGG
TATTGATGTGGCAGGACACCGGGGCCGTCTTTAGGCTCCTCCTGAAAGAG
GAGGGGCAGTTCGAGAGCGTCGAAGGGCTAGGCACCGGTCAGATAGGAGG
GAGATGGAACACATGGGATGCCGACAGGACAAGTACGTGGCCCCGAAGTA
TCCCAAGTCGGCCATCGCGGGGGAGTGGGTATTGATGTGGCAGGACACCG
GGGCCGTCTTTAGGCTCCTCCTGAAAGAGGAGGGGCAGTTCGAGAGCGTC
GAAGGGCTAGGCACCGGTCAGATAGGAGGGAGATGGAACACATGGGATGC
CGACAGGATGTTCCTTACTGTCGTACGTTCGAAGAGCCACGGGGTGCAGA
TAAGCGGGGATCACATGTTTTGGGGAACGAACATCATCGGGCCGCCCGAC
TCCGAGGATGTTCCTTACTGTCGTACGTTCGAAGAGCCACGGGGTGCAGA
TAAGCGGGGATCACATGTTTTGGGGAACGAACATCATCGGGCCGCCCGAC
TCCGAGATTCCCTTGAAAATCAGCGGTTACGTCATGTATGGTTTCCTGGA
GATTCCCTTGAAAATCAGCGGTTACGTCATGTATGGTTTCCTGGAGCCGA
CCTGCGTTGGGCGCTTCATCATGCGCCGGAGCCAGCAGGGGCAAGGCGAT
GGGGACATGGACGCAACAAGCAGCGGTCCACCGGATGCCCTCCCTTGACC
GACCTGCGTTGGGCGCTTCATCATGCGCCGGAGCCAGCAGGGGCAAGGCG
ATGGGGACATGGACGCAACAAGCAGCGGTCCACCGGATGCCCTCCCTTGA
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