prot_S-dermatodea_contig12386.1493.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig12386.1493.1
Unique Name	prot_S-dermatodea_contig12386.1493.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	98

Homology

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 9.560e-48
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            ++HEG STVLEV E TTIL+AALDNDI+LPHDCKLGVCLTCPS +VSGE+DQS+GTL+DSV   G+ALTCC+Y RSDV IRSVEED+LVGAQF
Sbjct:   68 IEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQF 160

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.900e-47
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            +QHEGK TVLEV E TTIL+AALD  I+LPHDC+LGVCLTCPS IVSGE+DQ  GTLDDSVVEQGFALTC SYPRSD V+RSVEED++V AQF
Sbjct:   55 IQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQF 147

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.240e-44
Identity = 70/93 (75.27%), Postives = 82/93 (88.17%), Query Frame = 0

Query:    5 GKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQFEREE 97
            GKS  LEV E+T++L+AALD  IELPHDCKLGVCLTCPS IVSGE+DQ   TLDDSVVEQG+ALTCCS+PRSD+VIR+++ED+LVGAQFE  E
Sbjct:   63 GKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGRE 155

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 141 bits (355), Expect = 3.410e-41
Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            ++HEG +TVLEV E T+ILDAALD  I+LPHDCKLGVCLTCPS +VSGE+DQS+GTL+DSV  QG+ALTC ++PRSD  I S+ ED+LV AQF
Sbjct:   46 IEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQF 138

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 137 bits (346), Expect = 8.210e-40
Identity = 64/95 (67.37%), Postives = 80/95 (84.21%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQFER 95
            +QHEGK T+L+V +  +IL+AALD  I+LPHDCKLGVCLTCPS IVSG++DQS+GTL  SV  +G+ALTC S+P SDVV+RS+EED+LV AQF R
Sbjct:   47 IQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFSR 141

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A5K0VF29_9MAGN (Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VF29_9MAGN)

HSP 1 Score: 125 bits (313), Expect = 1.080e-34
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            + HEGKST LEV E  +IL+ ALD  +E+PHDCKLGVC+TCP+ +VSGE+DQS G L D VVE+G+AL C SYPRSD  IR++ E++L+  Q 
Sbjct:   54 IDHEGKSTTLEVGEDESILERALDEGLEVPHDCKLGVCMTCPARLVSGEVDQSGGMLSDDVVERGYALLCASYPRSDCHIRTIPEEELLSLQL 146

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A067KVE0_JATCU (Ferredoxin n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KVE0_JATCU)

HSP 1 Score: 122 bits (305), Expect = 1.440e-33
Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            ++HEG+ST LEV     IL  ALD+ + +PHDCKLGVC+TCP+ +VSG+IDQSEG L D VVE+G+AL C SYPRSD  IR++ ED+L+  Q 
Sbjct:   47 IEHEGQSTELEVDPDENILSKALDSGLSVPHDCKLGVCMTCPAKVVSGKIDQSEGMLSDDVVERGYALLCASYPRSDCRIRTIPEDELLSLQL 139

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A6P6WVZ7_COFAR (Ferredoxin n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6WVZ7_COFAR)

HSP 1 Score: 122 bits (305), Expect = 1.660e-33
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            ++HEGK+T LEV    TIL  ALDN + +PHDCKLGVC+TCP+ ++SG +DQSEG L D VVE+G+AL C SYPRSD  IR++ E++L+  Q 
Sbjct:   52 IEHEGKTTELEVEPDETILSKALDNGLPVPHDCKLGVCMTCPAQLLSGTVDQSEGMLSDDVVERGYALLCASYPRSDCKIRTIPEEELLSLQL 144

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: W7U5Y2_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5Y2_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.870e-33
Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 0

Query:    4 EGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQFER 95
            +GK+  + V    ++L+AALD  IELPHDC+LG CL C + ++SG +DQ+  TLDDSV+EQG+ALTCCSYP+SDV IRS+ ED+L+  QF R
Sbjct:   49 DGKTHEINVESYKSVLEAALDEGIELPHDCQLGTCLVCAAKLISGTVDQTGSTLDDSVMEQGYALTCCSYPQSDVTIRSIPEDELIDEQFAR 140

[Close]

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 121 bits (304), Expect = 2.040e-33
Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    1 MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEIDQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQF 93
            ++H G+S V+EV E  TIL+ ALD  I++PHDCKLGVC+TCP+ +V+G++DQS+G L D VV QG+AL C SYPRSD  IR + ED+L+  Q 
Sbjct:   47 IEHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQL 139

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12386.1493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KV05_9PHAE	9.560e-48	78.49	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S2V4F7_9STRA	7.900e-47	79.57	Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617...	[more]
A0A836CGC2_9STRA	3.240e-44	75.27	2Fe-2S ferredoxin-type domain-containing protein n...	[more]
A0A7S3UW21_HETAK	3.410e-41	69.89	Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
A0A482SDV3_9ARCH	8.210e-40	67.37	2Fe-2S iron-sulfur cluster binding domain-containi...	[more]
A0A5K0VF29_9MAGN	1.080e-34	60.22	Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 ...	[more]
A0A067KVE0_JATCU	1.440e-33	59.14	Ferredoxin n=1 Tax=Jatropha curcas TaxID=180498 Re...	[more]
A0A6P6WVZ7_COFAR	1.660e-33	58.06	Ferredoxin n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6...	[more]
W7U5Y2_9STRA	1.870e-33	57.61	Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 Re...	[more]
A0A8J5WV81_ZIZPA	2.040e-33	56.99	2Fe-2S ferredoxin-type domain-containing protein n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 4..74 e-value: 2.0E-13 score: 50.1
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 1..86 score: 11.512
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 3..88 e-value: 7.4E-24 score: 81.4
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 1..90 e-value: 3.9E-23 score: 83.3
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 2..93
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 2..93
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 5..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12386	contig	S-dermatodea_contig12386:4447..5422 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12386.1493.1	mRNA_S-dermatodea_contig12386.1493.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig12386 4447..5431 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig12386.1493.1 ID=prot_S-dermatodea_contig12386.1493.1|Name=mRNA_S-dermatodea_contig12386.1493.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=98bp
MQHEGKSTVLEVSERTTILDAALDNDIELPHDCKLGVCLTCPSLIVSGEI
DQSEGTLDDSVVEQGFALTCCSYPRSDVVIRSVEEDKLVGAQFEREE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf