prot_S-dermatodea_contig12376.1487.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig12376.1487.1
Unique Name	prot_S-dermatodea_contig12376.1487.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	191

Homology

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 1.730e-78
Identity = 161/195 (82.56%), Postives = 169/195 (86.67%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AKPT-KSRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            MFAT  GVPDKAKAPHAYRW+IHIAAIKGVRSLS+APSSGSAPAAXXXXXXXXXX        XXXXXXXXXXXXXX    AKP  KSRAE+MAEAKAAKD+KKKVDRSQIVFEVKPW+ E DLKGLF KI K  I+GLVWGEA+KL PVAFGVKKL+LSCVV DDKVGVEDITD IE FEDEVQSVDMTTMNRL
Sbjct:   38 MFATCAGVPDKAKAPHAYRWYIHIAAIKGVRSLSLAPSSGSAPAAXXXXXXXXXXAAKATKVDXXXXXXXXXXXXXXXXXAAKPAEKSRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 6.730e-49
Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 0

Query:   83 SRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            SRAEQMA AK+AKD+ KKVDRSQIVFEVKPWEA ADLKGLF+KIRK  IDGLVWGEA+KL PVAFGVKKL+LSCVVVD KVGVEDITD IE FEDEVQSVDMTTMNRL
Sbjct:  742 SRAEQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.540e-48
Identity = 87/108 (80.56%), Postives = 94/108 (87.04%), Query Frame = 0

Query:   83 SRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            SRA++MA AK AKD+KKK+DRSQIVFEVKPW+ E DLK LF KI    IDGLVWGEA+KL PVAFGVKKL+LSCVV DDKVGVEDITD IEAFED VQSVDMTTMNRL
Sbjct:   75 SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 182

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.930e-38
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKSRAEQMAEAKAAKDSKKK----VDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            +FA     PD  K P+ YRW++H A+  G+R ++++  SG+A AA     XXXXXXXXXXXXXXXXXXXXXXXXXXX             A+AAK +KK+    ++RSQ+V EVKPWEAE DL+ L  KI+ + +DGL WGE +KL PVAFG+KKL++ C+++DDKV ++DITDAIE+FED VQSVD+ +MN++
Sbjct:   37 LFAKVPSTPDAGKYPNVYRWYVHTASKLGLR-VALSAQSGTAAAAPKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKVLMDDITDAIESFEDYVQSVDIASMNKM 229

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A7S2UXP5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP5_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.100e-38
Identity = 106/197 (53.81%), Postives = 135/197 (68.53%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSL-------SMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKSRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            +FA   G PDK+   HAYRW++HIAA+ GV+S+       + AP++   PA       XXXXXXXXXXXXXXXXXXXXXXXXXX                     K V+RSQ++FEVKPWEA+ DLK LF KI  +  +GL WGE Y+++PVAFG+ KL++SCV+VDD VG++D+TD IEA EDEVQSVD+ TMN++
Sbjct:   39 VFAQINGAPDKSSYVHAYRWYLHIAALGGVKSIISAVVAPAPAPATSQPPAGKGKKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXAKPVERSQLIFEVKPWEADQDLKSLFAKITALKKEGLSWGEGYEIKPVAFGIMKLVMSCVIVDDLVGMDDVTDPIEAMEDEVQSVDVLTMNKM 232

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.660e-37
Identity = 101/194 (52.06%), Postives = 136/194 (70.10%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKSRAEQMAEAKAAKDSKKK----VDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            +FA     PD +K P+ YRW++H AA  G+  ++++  S +  A XXXXXXXXXXXXX        XXXXXXXXXXX             A+AAK +KK+    ++RSQ+V EVKPWEAE DL+ L  KI++V +DGL WGE +KL PVAFG+KKL++ C+++DDKV ++DIT+AIEAFED VQSVD+ +MN++
Sbjct:   37 LFAKVPATPDASKYPNVYRWYVHTAAKLGLH-VALSAQSATPAAXXXXXXXXXXXXXXPAKKEAEDXXXXXXXXXXXXXXXXXXXXXXXRAEAAKANKKEKPKPIERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A835ZFP2_9STRA (EF-1 guanine nucleotide exchange domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP2_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.760e-36
Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 0

Query:   83 SRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRK-VVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNR 189
            SRAEQMA AKAAKD KKK++ S +V+EVKPWEA+ DLK L+EKI+K   +DGL W E   L PVAFG+ KL+++C + DDKVG+ DI+D IEA ED+VQSVD+  M R
Sbjct:   77 SRAEQMAAAKAAKDKKKKIEMSNVVYEVKPWEADQDLKALYEKIKKECAMDGLRWSEGCTLAPVAFGINKLVIACTIEDDKVGLNDISDMIEALEDDVQSVDLINMQR 184

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: W4FR25_9STRA (EF1_GNE domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR25_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.120e-35
Identity = 98/198 (49.49%), Postives = 126/198 (63.64%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMA------PSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKSRAEQMAEAKAA--KDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            +F+  T VPD AK P+ YRW++H A+  G+R    A      PSS  A A     X           XXXXXXXXXXXXXXXX           A+A  A  K+  K V+RSQ+V EVKPWEAE DL  L  KI+ + I+GL WGE +KL PVA+G+KKL++ C++VDD V ++DITDAIE+FED VQSVD+ +MN++
Sbjct:   37 LFSKFTTVPDAAKVPNVYRWYVHTASKLGLRVALTARNQVAQPSSPKAAAKPSTPXASTPKAAKPADXXXXXXXXXXXXXXXXXXXXXXXXXXRADAAKAGKKEKAKPVERSQVVIEVKPWEAETDLLDLAAKIKALEINGLTWGEGHKLVPVAYGIKKLLVQCIIVDDLVLLDDITDAIESFEDFVQSVDVASMNKV 234

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A835YW42_9STRA (Eukaryotic elongation factor-1 B beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW42_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.600e-35
Identity = 105/190 (55.26%), Postives = 132/190 (69.47%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKSRAEQMAEAKAAKDSKKKVDRSQIVFEVKPWEAEADLKGLFEKIR-KVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNR 189
            +FA   G PDKA  PHAYRW+IH+AA+ G+RSL+++ ++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      K++ S +V+EVKPWEA+ DLK L+EKI+ K  +DGL W E   L PVAFG+ KL+++C + DDKVG+ DI+D IEA ED+VQSVD+  M R
Sbjct:   39 LFAACNGAPDKATYPHAYRWYIHVAALTGLRSLNLSAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIEMSNVVYEVKPWEADQDLKALYEKIKEKCAMDGLRWSEGCTLAPVAFGINKLVIACTIEDDKVGLNDISDMIEALEDDVQSVDLVNMQR 228

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BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Match: A0A024TSA9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSA9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.840e-34
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 0

Query:    1 MFATSTGVPDKAKAPHAYRWFIHIAAIKGVR-SLSMAPSSGSAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPTKS-----------RAEQMAEAKAAKDSKKK-VDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVKKLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL 190
            +FA    VPD AK P+ YRW+IHIA+  G+R +L+    S + P+    XXXXXXXXX           XXXXXXXXX                 RAE    AKA K  K K V+RSQ+V EVKPWEAE DL  L  KI+ + I+GL WGE +KL PVAFG+KKL++ C++VDD V ++DIT+AIEAFED VQSVD+ +MN++
Sbjct:   37 LFAKFNAVPDAAKVPNVYRWYIHIASKLGLRVALAARTPSAAKPSTPKAXXXXXXXXXSTPKGKKPAADXXXXXXXXXXXXXXXXXXXXXXXXXXRAEA---AKAGKKEKAKPVERSQVVLEVKPWEAETDLVELAGKIKALEINGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 236

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12376.1487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KBH2_9PHAE	1.730e-78	82.56	EF1_GNE domain-containing protein n=2 Tax=Ectocarp...	[more]
D8LM77_ECTSI	6.730e-49	87.04	Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A6H5JFV9_9PHAE	1.540e-48	80.56	EF1_GNE domain-containing protein n=3 Tax=Ectocarp...	[more]
A0A485LAV1_9STRA	1.930e-38	54.64	Aste57867_18076 protein n=1 Tax=Aphanomyces stella...	[more]
A0A7S2UXP5_9STRA	2.100e-38	53.81	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6G0WJF4_9STRA	8.660e-37	52.06	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A835ZFP2_9STRA	5.760e-36	62.04	EF-1 guanine nucleotide exchange domain-containing...	[more]
W4FR25_9STRA	3.120e-35	49.49	EF1_GNE domain-containing protein n=3 Tax=Aphanomy...	[more]
A0A835YW42_9STRA	5.600e-35	55.26	Eukaryotic elongation factor-1 B beta n=1 Tax=Trib...	[more]
A0A024TSA9_9STRA	1.840e-34	50.74	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 103..190 e-value: 1.1E-28 score: 111.3
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 106..190 e-value: 1.8E-30 score: 105.0
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 96..190 e-value: 6.1E-33 score: 114.7
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 2..189
None	No IPR available	PANTHER	PTHR11595:SF21	ELONGATION FACTOR 1-BETA	coord: 2..189
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	54984	eEF-1beta-like	coord: 100..190

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12376	contig	S-dermatodea_contig12376:1131..5735 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12376.1487.1	mRNA_S-dermatodea_contig12376.1487.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig12376 1113..6764 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig12376.1487.1 ID=prot_S-dermatodea_contig12376.1487.1|Name=mRNA_S-dermatodea_contig12376.1487.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=191bp
MFATSTGVPDKAKAPHAYRWFIHIAAIKGVRSLSMAPSSGSAPAAAPAST
PKAAPAAKEDEDDDEDDLFGDDDAEEEAKPTKSRAEQMAEAKAAKDSKKK
VDRSQIVFEVKPWEAEADLKGLFEKIRKVVIDGLVWGEAYKLQPVAFGVK
KLILSCVVVDDKVGVEDITDAIEAFEDEVQSVDMTTMNRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014038	EF1B_bsu/dsu_GNE
IPR014717	Transl_elong_EF1B/ribosomal_S6
IPR036219	eEF-1beta-like_sf