prot_S-dermatodea_contig12371.1486.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12371.1486.1
Unique Nameprot_S-dermatodea_contig12371.1486.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length380
Homology
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BLAST of mRNA_S-dermatodea_contig12371.1486.1 vs. uniprot
Match: D7FIZ0_ECTSI (GOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ0_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.200e-37
Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 0 
Query:  290 KVLVASAKSFEDFVAEQLREDGWGQVLRTEGSKGLLVPRGKTLTQVFLVAPGCYLCWEFRVQDHDLGFSLRRRTQGMGGSTEEDIFGLER 379
            ++LVASAKSFE+FV EQL+EDG GQVLR EG  GLLVPRGK L+Q F+VAPGC LCWEFRV+D+DLGF+LRRR QGMGGSTEEDIF L+R
Sbjct:   16 QILVASAKSFEEFVDEQLQEDGSGQVLRREGGTGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDYDLGFALRRRFQGMGGSTEEDIFELKR 105
[Close]
BLAST of mRNA_S-dermatodea_contig12371.1486.1 vs. uniprot
Match: D7FIZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ1_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 4.850e-19
Identity = 121/366 (33.06%), Postives = 148/366 (40.44%), Query Frame = 0 
Query:    1 WGRIAPSPSVAGGRPLQGAWGRLQEVMDEIKDLSPQRRDTELPSPPTHSPAPLVSSS--STPPAEEERKGFGPARDSRSASTNAASSGGAS----------------------------------RFRTPSPYTPHPAAPVTSPPTPAASAGNTPADTP---LQRSTLPVMSPPLDEEEAPGDSVGEPAAVIGGASPIAATSVESQAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWVG--GAGGSLGGE-----------------LHHASLGVGDAEDQEAD------------------VASDRGGYGGRGFVGQGFVRAAEALSESPHLRRAAGAAATVVSAAADTAKVQFTITSKTIGK 290
            WGR+APSP  +  +PL G WGRLQEVMDEIK +SP        SP +  P P +S +  S+  A EERKGF          T    +G +S                                  R  +PS  +P     VTSPPTPAA A NTP +TP   +Q+   P  S P  +  A  +                A + E                                    G  GAGG +                    +  AS G  D   +E +                     D    GGRG+VGQ F++AAEALSESP LRRAAGAAAT VSAAA TA+VQFT TS+TIGK
Sbjct:   47 WGRVAPSPDSS--QPLPGPWGRLQEVMDEIKVMSPA-------SPTSRVPHPFLSGARPSSTAAAEERKGFARTSSPLPMPTRGRIAGSSSXXXXXXXRIADSRQXXXXXXXXXXXXXXXXXXXPRSLSPS-SSPRQ---VTSPPTPAALAANTPCETPPTAVQQPVAPASSLPSSQHLAAVEXXXXXXXXXXXXXXXXADANEPGVHTKQEREEETPPVPVPGLALGYSTSPPFSSAATGTRGAGGEVAATAAPXXXXXXXSDSGAAPVGTASHGFSDQAGEEPEDLRGDDTAEDLVNVRAVLPVEDDAATGGRGYVGQRFIQAAEALSESPQLRRAAGAAATAVSAAAGTARVQFTYTSRTIGK 399
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12371.1486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIZ0_ECTSI2.200e-3777.78GOLD domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIZ1_ECTSI4.850e-1933.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036598GOLD domain superfamilySUPERFAMILY101576Supernatant protein factor (SPF), C-terminal domaincoord: 323..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12371contigS-dermatodea_contig12371:668..5427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12371.1486.1mRNA_S-dermatodea_contig12371.1486.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12371 668..5427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12371.1486.1 ID=prot_S-dermatodea_contig12371.1486.1|Name=mRNA_S-dermatodea_contig12371.1486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=380bp
WGRIAPSPSVAGGRPLQGAWGRLQEVMDEIKDLSPQRRDTELPSPPTHSP
APLVSSSSTPPAEEERKGFGPARDSRSASTNAASSGGASRFRTPSPYTPH
PAAPVTSPPTPAASAGNTPADTPLQRSTLPVMSPPLDEEEAPGDSVGEPA
AVIGGASPIAATSVESQAVPPPPPPPPGGAMGAAFSLLDEMSGGGGGEGW
VGGAGGSLGGELHHASLGVGDAEDQEADVASDRGGYGGRGFVGQGFVRAA
EALSESPHLRRAAGAAATVVSAAADTAKVQFTITSKTIGKVLVASAKSFE
DFVAEQLREDGWGQVLRTEGSKGLLVPRGKTLTQVFLVAPGCYLCWEFRV
QDHDLGFSLRRRTQGMGGSTEEDIFGLER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036598GOLD_dom_sf