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Homology
BLAST of mRNA_S-dermatodea_contig12371.1486.1 vs. uniprot
Match: D7FIZ0_ECTSI (GOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ0_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.200e-37 Identity = 70/90 (77.78%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 868 KVLVASAKSFEDFVAEQLREDGWGQVLRTEGSKGLLVPRGKTLTQVFLVAPGCYLCWEFRVQDHDLGFSLRRRTQGMGGSTEEDIFGLER 1137
++LVASAKSFE+FV EQL+EDG GQVLR EG GLLVPRGK L+Q F+VAPGC LCWEFRV+D+DLGF+LRRR QGMGGSTEEDIF L+R
Sbjct: 16 QILVASAKSFEEFVDEQLQEDGSGQVLRREGGTGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDYDLGFALRRRFQGMGGSTEEDIFELKR 105
BLAST of mRNA_S-dermatodea_contig12371.1486.1 vs. uniprot
Match: D7FIZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ1_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 4.850e-19 Identity = 121/366 (33.06%), Postives = 148/366 (40.44%), Query Frame = 1
Query: 1 WGRIAPSPSVAGGRPLQGAWGRLQEVMDEIKDLSPQRRDTELPSPPTHSPAPLVSSS--STPPAEEERKGFGPARDSRSASTNAASSGGAS----------------------------------RFRTPSPYTPHPAAPVTSPPTPAASAGNTPADTP---LQRSTLPVMSPPLDEEEAPGDSVGEPAAVIGGASPIAATSVESQAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWVG--GAGGSLGGE-----------------LHHASLGVGDAEDQEAD------------------VASDRGGYGGRGFVGQGFVRAAEALSESPHLRRAAGAAATVVSAAADTAKVQFTITSKTIGK 870
WGR+APSP + +PL G WGRLQEVMDEIK +SP SP + P P +S + S+ A EERKGF T +G +S R +PS +P VTSPPTPAA A NTP +TP +Q+ P S P + A + A + E G GAGG + + AS G D +E + D GGRG+VGQ F++AAEALSESP LRRAAGAAAT VSAAA TA+VQFT TS+TIGK
Sbjct: 47 WGRVAPSPDSS--QPLPGPWGRLQEVMDEIKVMSPA-------SPTSRVPHPFLSGARPSSTAAAEERKGFARTSSPLPMPTRGRIAGSSSXXXXXXXRIADSRQXXXXXXXXXXXXXXXXXXXPRSLSPS-SSPRQ---VTSPPTPAALAANTPCETPPTAVQQPVAPASSLPSSQHLAAVEXXXXXXXXXXXXXXXXADANEPGVHTKQEREEETPPVPVPGLALGYSTSPPFSSAATGTRGAGGEVAATAAPXXXXXXXSDSGAAPVGTASHGFSDQAGEEPEDLRGDDTAEDLVNVRAVLPVEDDAATGGRGYVGQRFIQAAEALSESPQLRRAAGAAATAVSAAAGTARVQFTYTSRTIGK 399
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 147.9 |
| Seed ortholog evalue | 9.6e-33 |
| Seed eggNOG ortholog | 2880.D7FIZ0 |
| EggNOG OGs | 2F1MD@1,2T2M0@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | GOLD |
| Ec32 ortholog | Ec-07_005060.1 |
| Exons | 4 |
| Model size | 1140 |
| Cds size | 1140 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig12371.1486.1 >prot_S-dermatodea_contig12371.1486.1 ID=prot_S-dermatodea_contig12371.1486.1|Name=mRNA_S-dermatodea_contig12371.1486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=380bp
WGRIAPSPSVAGGRPLQGAWGRLQEVMDEIKDLSPQRRDTELPSPPTHSP APLVSSSSTPPAEEERKGFGPARDSRSASTNAASSGGASRFRTPSPYTPH PAAPVTSPPTPAASAGNTPADTPLQRSTLPVMSPPLDEEEAPGDSVGEPA AVIGGASPIAATSVESQAVPPPPPPPPGGAMGAAFSLLDEMSGGGGGEGW VGGAGGSLGGELHHASLGVGDAEDQEADVASDRGGYGGRGFVGQGFVRAA EALSESPHLRRAAGAAATVVSAAADTAKVQFTITSKTIGKVLVASAKSFE DFVAEQLREDGWGQVLRTEGSKGLLVPRGKTLTQVFLVAPGCYLCWEFRV QDHDLGFSLRRRTQGMGGSTEEDIFGLER* back to topmRNA from alignment at S-dermatodea_contig12371:668..5427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig12371.1486.1 ID=mRNA_S-dermatodea_contig12371.1486.1|Name=mRNA_S-dermatodea_contig12371.1486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4760bp|location=Sequence derived from alignment at S-dermatodea_contig12371:668..5427- (Saccorhiza dermatodea SderLu1190fm monoicous) TGGGGACGGATCGCGCCCTCTCCCAGCGTTGCTGGTGGTCGCCCGCTTCA
GGGCGCTTGGGGACGGCTGCAAGAGGTTTGTCCATGTCCATGCCCGTGTC
CGTGTCCGTGTCCGTGTCCGTGTCCGTGTCCGTGCCGCTCTATTTTCACT
GTATTTATACATTCAAAAATTTCAATTTCAATGTGGGATATTTTGGTCGA
ATTTCCTTTCAAATATGACTTTTATCTAAAAGCCGTTCATGTTGTGAGCG
GTGAGGAGTGAGGATCGACCTTTTCGGCTTTAGGGTCAGCACCAGAAGAC
AGATAGAATGCAAAAACGAAACCCAAAGATCCGTTGCTTTGGTGGTGGAC
GGTGGACCACGTGGGTGCGTGTGAGCGCAGCAGCGTCGCGTTTTGTTTTT
GCCAAATTGCCTGCTTTTATTTAAACGAAAACACGATACTTGTATAACAT
CGCTTTTATTATTATAAAGAAACAGAACACAGAAAGTGTATTGATACCAG
TGTAAAATCCGAAGTATGATACTTGTATGATACCTGAAATATACCATTTA
CCCTTGTCGTCCGTCCGTGGGTGTTTTTGAAGCTATGATATCCATGGTAA
ATCTAAAAAAAAATGGAAGCTTGAGGTGACTTCCTAAAAACCTTCTTGAT
TTTGCGTATGTATCATGAACTAACTGCTGGACTGCAAAATGTGTTTCACA
CGCATCTCCCAGGCAAATCTGACAGCGCACTCGTGGGCACCTCAGATCGA
CAACCAAACCCTGCCCTCGCCATTCACTCCTCCCCCACAAACGAAAAAAT
AACGACACGAGCACAAAGTCCCCACTATCATACAATAATTGTACATACTT
GTACACGTCTGCTCTTCCCTTGACAACCCCCCCCCCCCCCCCCCCCCACC
TTCCCCCTCAACCAGGTCATGGACGAGATCAAGGATTTGAGCCCTCAGCG
CCGCGACACCGAGCTTCCCTCCCCTCCCACCCACTCCCCCGCTCCTCTCG
TGAGCTCGTCATCAACTCCGCCCGCGGAGGAGGAGCGCAAAGGGTTCGGC
CCGGCCCGAGACAGCAGGTCTGCATCCACCAACGCCGCCTCTTCCGGCGG
CGCTTCCCGTTTCCGAACCCCATCGCCGTATACCCCTCACCCCGCCGCGC
CAGTAACTTCTCCCCCCACCCCGGCCGCTTCTGCGGGAAACACGCCGGCC
GACACGCCCCTCCAGCGATCGACGCTGCCCGTGATGTCGCCACCGCTGGA
CGAGGAAGAGGCACCCGGAGACTCGGTGGGCGAGCCTGCTGCCGTGATCG
GCGGAGCTTCCCCGATCGCTGCGACGAGCGTAGAATCGCAGGCGGTGCCG
CCGCCGCCGCCTCCGCCGCCGGGGGGAGCGATGGGCGCTGCGTTTTCGTT
GCTGGATGAGATGAGCGGGGGCGGCGGAGGGGAGGGTTGGGTTGGAGGGG
CTGGCGGGAGCTTAGGGGGTGAGCTTCACCATGCGTCCCTTGGGGTTGGT
GATGCTGAAGATCAAGAGGCGGATGTGGCCAGCGACCGGGGGGGGTATGG
CGGGCGAGGGTTCGTCGGGCAAGGGTTCGTCAGGGCGGCAGAGGTGAGCG
AGGTTTCACCGATACTGTAATTATTAATACGACTATTGTATGTACTTGTA
CTCGTATCATGTTTTTTTTTTGCGCGTGTGTGACTTTGTTTCGTTTAATT
TGCTCCTGCTTTTCGTTTTGTTCTTCTTTCGTTTGTTCTTGGAATTTTGA
TTTTTTATCTTCCCCCCCGGTTGCGCATGATATGTCGCCTGATTTTTGTT
TTCTTTTTTATTCTTGGCGGTACCACTGCGTTGGCGTTTGCGGTATTTTT
ATTTAAGGCACTGACGGTGTGTTTGCACGTGCGAGAAGGAGATACCTTAG
CAAACAGACGGGCGCGGCCAATGGGCTTTTACAGGAGCGTTCTCATACAG
TAGTCGCGGTCAAATTGTGATACCTTCCTTTTCTTATCATATGCTCGAGA
GCTCGTTGTTTTCTGTACAGTTTGTTGTCTTGGACAAAATAAAAAATCAA
CCATACGCGAACGGAAACAAGGGCCTATCGGTCCCACACGTGCGATAAAA
GAAGATGAAACAAAATGGACACCATACAAGAATGAGTACCAGAACATAAC
TTGCTCTTGCTCCACATGTGCAGCTGAAACTGCAGCACACCTGTTTGACG
GTTAGCCCCCCCGCCGCACGTTTGTGGCTCGGTGGAGTATTTCGCACACT
GCTTGATATATAGTTCTCGTTTGGTCAAACGACCTTCGGAGACGTCAAGA
AGCTCTTAACATACAAACTCAGTCGACAGCACGTACAGACAGTACTACAT
GTAAGTACACAGGTTGACTGATTTTATCGATTTACCACACTTAGAAACAA
ACTAACCAGCCCTCCAAATGGTTGCCGATCCCGTTCTAGGATGTTAAAAA
ATTATGAATCGAGAAGTCGAGAGAAACTCTTACGGAATTAATTCAGATAA
CTACTTGAAAAGAGTGAATTACACTTTACCGTATCATAGTACAGTACAAC
GTCGGTATTTCGACATAACCTTAACAAAAAGAACAGCATCGAAATTTTAG
TCGATCCATGCCGAACACCACCGCTGGCCGTGCTATGATACGATACATGT
TTCGGTCGCCCGCCCCCCAACACTCCGTACACCACAGGCGCTCAGCGAAT
CCCCTCATCTGAGGCGCGCGGCGGGCGCCGCGGCTACGGTAGTCTCTGCC
GCTGCAGATACTGCAAAGGTGCAATTCACGATCACTTCAAAGACCATCGG
CAAGGTTCTCGTGGCCAGCGCAAAGTCTTTCGAGGACTTCGTGGCCGAGC
AGCTGAGAGAGGACGGCTGGGGCCAGGTGTTGAGGACCGAGGGATCGAAG
GGTCTGCTCGTACCGCGCGGGAAGACTCTGACCCAGGTTTTCCTCGTCGC
TCCCGGCTGCTACCTTTGTTGGGAGTTTCGAGTGCAGGTGGGGAGCGAGC
GGCTTGCGCGTGATCCTTAGGGCAGTCTTGTCTACGGTTTATTGCCGAGG
TATATACACAGCAGTAATCAGGAGCAAATGCGCCAAAACGTATCGTGTAC
TGCTGTACCCAGCCTGTTAAACCATTAACCAATCTGGTCTGGCCTTGCGA
TATTTTATAGCACGTCCGCGATCTTCCCGCCCGAAATGTCGAGATTAAAA
AAATTAAATAAAAAACAATTAAAACAAGTTTTTTTTCGGGCTAACGTCAT
GAAAACAAACACTTGAATACGTTAGTGAGCAGAATTTTGGTCCTGATACC
TGTCTTCCTCAGTAATATAATAGTAGGTATCATAGCCGTTGCTACACCCG
TAAGGTGTCCGTTGGCAGGACGATATGTGGGTTTGGACGATACGGTGTGG
CGACCCAAGGCGGTCTTAGGAAGCTCAACTCTAAAATCAAGTAAGTGGCT
TCACAACTTGGCATCAAGAAGTGTATAGGATTTCAGTTTCAGAAATCGTG
TAGGATTTTTGTGCTCTACAGAAATTGTACAATATGATAGGATTTTTGTT
TCAGGTTTTTTGCGTTCAGCTCTAAAACAAACCGCTCTTTTACAAAAAAG
AGATTAAAAACAAATCGAAGCAGTATTAACAACTACAGTATTAGAGATAA
AGGGCGATCGATGCTTTGCGAGTGCATGCGTAAGTGCTGCATGCGTATGT
ATGTAGATTTTGTTTTGCCGATTTTCGATATTCCGAGGTGATAAATCCGG
AACCGTGGGACACTGATGACGCTCCGAAGGCTATGATACTACATACACCA
CGGGAATGTCACTGGTAGCATGCGCGATTGGAAGGCGCGCACCATTGGGG
AACAAATCGCGCGGCCGCACGCATTATCGATACCCCTTGTGACAGCGCAC
TGCCTCACCCCCGCCCCAAACTCTTAGTCCAAGTTGACGATGATTTTCTC
CTAATCACTCGGAAAGCATGGCCTATGCTCGCTGTTGGTGTTTCGCTAGA
CTCGACGGACACATCTCCCCTCCCTTAAGAAATCAAGGACTTGAAAGGAC
CTCGACTTATGCCCTTGCGGCTCGGACGAGTGTGAAGACCGTGTCCATGT
ATAAAAGTGGCGGAATGCCCGTGTGATGAGAAGGGGGGAGAAGTGTGCAT
GGCTGAGCTGGGAAAATTTGAAGTCTGTGACAGAGAGACGTTTGAAGCCT
GGGACAGCCAGACGAAGGCGGTAGCTATACTGGGGGATAAGAAGTGCCCT
GAGAGGGCGAGAAGTCATGTAGAGAGGATAAGAAAACGATTTTTGCGCCA
CCTTTGGCAGAGTAGGAAGGAACGATTGGCCATCGGCGATAGATCGATCC
TGTGGGAACAATGCTCCGTACTCCGTCCTCTCGACGACAGACGCGTGATC
AATGGTCTAACACTGTAGCTATTACTATTACTATTACTACTACTATTACT
ATTACTACTACTATTACCATTACTATTACTATTGCTATTACTATTACTAT
TGCTATTACTATTACTATTACTATTACTATTACTATTACTATTACTATTA
CTATTACTATTACTATTACTATAATAAGGCATGCTAAACATAAGTACGCC
CCCCCACTCCCCCCCCGCCCCTCCCTCCTGCCCTCTCTGCCCTCGTTTCA
TTGGCCCCTTTTCGCCCATATAGGACCACGATCTCGGATTTTCCCTCCGG
CGCCGCACTCAGGGCATGGGTGGATCTACCGAGGAAGACATTTTTGGGCT
AGAGAGGTGA back to topCoding sequence (CDS) from alignment at S-dermatodea_contig12371:668..5427- >mRNA_S-dermatodea_contig12371.1486.1 ID=mRNA_S-dermatodea_contig12371.1486.1|Name=mRNA_S-dermatodea_contig12371.1486.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2280bp|location=Sequence derived from alignment at S-dermatodea_contig12371:668..5427- (Saccorhiza dermatodea SderLu1190fm monoicous) TGGGGACGGATCGCGCCCTCTCCCAGCGTTGCTGGTGGTCGCCCGCTTCA GGGCGCTTGGGGACGGCTGCAAGAGTGGGGACGGATCGCGCCCTCTCCCA GCGTTGCTGGTGGTCGCCCGCTTCAGGGCGCTTGGGGACGGCTGCAAGAG GTCATGGACGAGATCAAGGATTTGAGCCCTCAGCGCCGCGACACCGAGCT TCCCTCCCCTCCCACCCACTCCCCCGCTCCTCTCGTGAGCTCGTCATCAA CTCCGCCCGCGGAGGAGGAGCGCAAAGGGTTCGGCCCGGCCCGAGACAGC AGGTCTGCATCCACCAACGCCGCCTCTTCCGGCGGCGCTTCCCGTTTCCG AACCCCATCGCCGTATACCCCTCACCCCGCCGCGCCAGTAACTTCTCCCC CCACCCCGGCCGCTTCTGCGGGAAACACGCCGGCCGACACGCCCCTCCAG CGATCGACGCTGCCCGTGATGTCGCCACCGCTGGACGAGGAAGAGGCACC CGGAGACTCGGTGGGCGAGCCTGCTGCCGTGATCGGCGGAGCTTCCCCGA TCGCTGCGACGAGCGTAGAATCGCAGGCGGTGCCGCCGCCGCCGCCTCCG CCGCCGGGGGGAGCGATGGGCGCTGCGTTTTCGTTGCTGGATGAGATGAG CGGGGGCGGCGGAGGGGAGGGTTGGGTTGGAGGGGCTGGCGGGAGCTTAG GGGGTGAGCTTCACCATGCGTCCCTTGGGGTTGGTGATGCTGAAGATCAA GAGGCGGATGTGGCCAGCGACCGGGGGGGGTATGGCGGGCGAGGGTTCGT CGGGCAAGGGTTCGTCAGGGCGGCAGAGGTCATGGACGAGATCAAGGATT TGAGCCCTCAGCGCCGCGACACCGAGCTTCCCTCCCCTCCCACCCACTCC CCCGCTCCTCTCGTGAGCTCGTCATCAACTCCGCCCGCGGAGGAGGAGCG CAAAGGGTTCGGCCCGGCCCGAGACAGCAGGTCTGCATCCACCAACGCCG CCTCTTCCGGCGGCGCTTCCCGTTTCCGAACCCCATCGCCGTATACCCCT CACCCCGCCGCGCCAGTAACTTCTCCCCCCACCCCGGCCGCTTCTGCGGG AAACACGCCGGCCGACACGCCCCTCCAGCGATCGACGCTGCCCGTGATGT CGCCACCGCTGGACGAGGAAGAGGCACCCGGAGACTCGGTGGGCGAGCCT GCTGCCGTGATCGGCGGAGCTTCCCCGATCGCTGCGACGAGCGTAGAATC GCAGGCGGTGCCGCCGCCGCCGCCTCCGCCGCCGGGGGGAGCGATGGGCG CTGCGTTTTCGTTGCTGGATGAGATGAGCGGGGGCGGCGGAGGGGAGGGT TGGGTTGGAGGGGCTGGCGGGAGCTTAGGGGGTGAGCTTCACCATGCGTC CCTTGGGGTTGGTGATGCTGAAGATCAAGAGGCGGATGTGGCCAGCGACC GGGGGGGGTATGGCGGGCGAGGGTTCGTCGGGCAAGGGTTCGTCAGGGCG GCAGAGGCGCTCAGCGAATCCCCTCATCTGAGGCGCGCGGCGGGCGCCGC GGCTACGGTAGTCTCTGCCGCTGCAGATACTGCAAAGGTGCAATTCACGA TCACTTCAAAGACCATCGGCAAGGTTCTCGTGGCCAGCGCAAAGTCTTTC GAGGACTTCGTGGCCGAGCAGCTGAGAGAGGACGGCTGGGGCCAGGTGTT GAGGACCGAGGGATCGAAGGGTCTGCTCGTACCGCGCGGGAAGACTCTGA CCCAGGTTTTCCTCGTCGCTCCCGGCTGCTACCTTTGTTGGGAGTTTCGA GTGCAGGCGCTCAGCGAATCCCCTCATCTGAGGCGCGCGGCGGGCGCCGC GGCTACGGTAGTCTCTGCCGCTGCAGATACTGCAAAGGTGCAATTCACGA TCACTTCAAAGACCATCGGCAAGGTTCTCGTGGCCAGCGCAAAGTCTTTC GAGGACTTCGTGGCCGAGCAGCTGAGAGAGGACGGCTGGGGCCAGGTGTT GAGGACCGAGGGATCGAAGGGTCTGCTCGTACCGCGCGGGAAGACTCTGA CCCAGGTTTTCCTCGTCGCTCCCGGCTGCTACCTTTGTTGGGAGTTTCGA GTGCAGGACCACGATCTCGGATTTTCCCTCCGGCGCCGCACTCAGGGCAT GGGTGGATCTACCGAGGAAGACATTTTTGGGCTAGAGAGGTGAGACCACG ATCTCGGATTTTCCCTCCGGCGCCGCACTCAGGGCATGGGTGGATCTACC GAGGAAGACATTTTTGGGCTAGAGAGGTGA back to top
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