prot_S-dermatodea_contig12275.1426.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12275.1426.1
Unique Nameprot_S-dermatodea_contig12275.1426.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length39
Homology
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BLAST of mRNA_S-dermatodea_contig12275.1426.1 vs. uniprot
Match: A0A6H5JUK4_9PHAE (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUK4_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 8.660e-9
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0 
Query:    1 MPTASKRCMRFAAAALACNAVCLGFATGLAKAPAQGM 37
            MP AS+RCMRF   ALACNA CLGF TGLAKAP++G+
Sbjct:    1 MPAASQRCMRFTVGALACNAACLGFVTGLAKAPSRGI 37
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12275.1426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JUK4_9PHAE8.660e-972.97ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availableTMHMMTMhelixcoord: 13..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12275contigS-dermatodea_contig12275:4443..4559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12275.1426.1mRNA_S-dermatodea_contig12275.1426.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12275 4180..4559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12275.1426.1 ID=prot_S-dermatodea_contig12275.1426.1|Name=mRNA_S-dermatodea_contig12275.1426.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=39bp
MPTASKRCMRFAAAALACNAVCLGFATGLAKAPAQGMPR
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