prot_S-dermatodea_contig12189.1368.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12189.1368.1
Unique Nameprot_S-dermatodea_contig12189.1368.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length68
Homology
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BLAST of mRNA_S-dermatodea_contig12189.1368.1 vs. uniprot
Match: A0A6H5LPC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPC9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.700e-13
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0 
Query:    1 MKRKERKEFKRRNEPVEGRPKPIQYVDPWGSVARTFQKDGMDDVGSKGSKNVTSNG-SRTANGS 63
            MKR++RKEFKRRN+  +GRPKP+ YVDPWGSVARTFQKDG        +   +S G SR  NGS
Sbjct:  143 MKRRDRKEFKRRNQSEDGRPKPVAYVDPWGSVARTFQKDGAKAPSPSANGGESSRGGSRVGNGS 206
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BLAST of mRNA_S-dermatodea_contig12189.1368.1 vs. uniprot
Match: D8LHQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.720e-11
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0 
Query:    1 MKRKERKEFKRRNEPVEGRPKPIQYVDPWGSVARTFQKDGMDDVGSKGSKNVTSNG-SRTANGS 63
            MKR++RKEFKRRN+  +GRPKP+ YVDPWGSVA TFQKDG        +   +S G SR  NGS
Sbjct: 1109 MKRRDRKEFKRRNQGEDGRPKPVAYVDPWGSVATTFQKDGAKAPSPSANGGGSSRGGSRVGNGS 1172
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12189.1368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LPC9_9PHAE3.700e-1360.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ5_ECTSI1.720e-1159.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12189contigS-dermatodea_contig12189:1128..4453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12189.1368.1mRNA_S-dermatodea_contig12189.1368.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12189 619..4525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12189.1368.1 ID=prot_S-dermatodea_contig12189.1368.1|Name=mRNA_S-dermatodea_contig12189.1368.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=68bp
MKRKERKEFKRRNEPVEGRPKPIQYVDPWGSVARTFQKDGMDDVGSKGSK
NVTSNGSRTANGSISTA*
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