prot_S-dermatodea_contig12165.1350.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12165.1350.1
Unique Nameprot_S-dermatodea_contig12165.1350.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length162
Homology
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BLAST of mRNA_S-dermatodea_contig12165.1350.1 vs. uniprot
Match: D8LCK1_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK1_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.200e-47
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0 
Query:    1 TKLALEDALDSTTLGDLWFERGELREARHEHLRALKIRATRLRPGHPDVAESLESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVALKGQLGKLPEAEAVCAHALTIVEKKEAEGEKTPHLMVALLKLQSKIIKRQG 152
            +K AL DALDST LGDLWFERGEL+EAR+EHLRAL+IR+ RL PGHPD+AESLESL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAV+LKGQ GKLPEAEAVCAHA++IVE  +++G  TPHLM ALLKLQSKI+KRQG
Sbjct:  119 SKTALADALDSTILGDLWFERGELKEARYEHLRALRIRSARLPPGHPDIAESLESLGNVAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQAGKLPEAEAVCAHAMSIVEVNDSQGHNTPHLMAALLKLQSKILKRQG 270
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BLAST of mRNA_S-dermatodea_contig12165.1350.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.900e-42
Identity = 115/152 (75.66%), Postives = 128/152 (84.21%), Query Frame = 0 
Query:    1 TKLALEDALDSTTLGDLWFERGELREARHEHLRALKIRATRLRPGHPDVAESLESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVALKGQLGKLPEAEAVCAHALTIVEKKEAEGEKTPHLMVALLKLQSKIIKRQG 152
            +K AL DALDST  GD WFERGEL+EAR+EHLRAL+IR+ RL PGHPD+AESLESL           XXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAV+LKGQ GKL EAEAVCAHA++IVE K+++G  TPHLM ALLKLQSKI+KRQG
Sbjct: 1564 SKTALADALDSTIRGDQWFERGELKEARYEHLRALRIRSARLPPGHPDIAESLESLGNVAIREGNHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNLAVSLKGQAGKLSEAEAVCAHAMSIVEVKDSQGHNTPHLMAALLKLQSKILKRQG 1715
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12165.1350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCK1_ECTSI1.200e-4780.26Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ect... [more]
A0A6H5JQC7_9PHAE2.900e-4275.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 8..154
e-value: 6.7E-30
score: 106.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 7..123
NoneNo IPR availablePFAMPF13424TPR_12coord: 48..125
e-value: 6.3E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 14..139
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 14..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12165contigS-dermatodea_contig12165:4122..7098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12165.1350.1mRNA_S-dermatodea_contig12165.1350.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12165 4122..7098 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12165.1350.1 ID=prot_S-dermatodea_contig12165.1350.1|Name=mRNA_S-dermatodea_contig12165.1350.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=162bp
TKLALEDALDSTTLGDLWFERGELREARHEHLRALKIRATRLRPGHPDVA
ESLESLGNVAIREGNHLEAEGLHRKALEMRMRELGPGHMDVAATLNNLAV
ALKGQLGKLPEAEAVCAHALTIVEKKEAEGEKTPHLMVALLKLQSKIIKR
QGELCVDWSID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf