prot_S-dermatodea_contig12159.1345.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12159.1345.1
Unique Nameprot_S-dermatodea_contig12159.1345.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length276
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig12159.1345.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 5.630e-34
Identity = 70/108 (64.81%), Postives = 80/108 (74.07%), Query Frame = 0 
Query:  166 GITLWLDMRTAVLPAAQTLQTLYDDLRQRELALGRTPEDPDWTLKRVPNPVGALLFAPEPEGRAADESNALG---GALQCYELNGESDR--VLEVPSGDFIGFGFDPV 268
            G+ LWLDMRTAVLPAAQTL+TLY +LRQRE ALGR+PED DWTL RVPNPVGALL+A EPE RAA+E  ALG    AL C+ L G      V++V SG  +G   DPV
Sbjct:  104 GVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPV 211
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12159.1345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI5.630e-3464.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12159contigS-dermatodea_contig12159:3589..4772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12159.1345.1mRNA_S-dermatodea_contig12159.1345.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12159 3588..4772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12159.1345.1 ID=prot_S-dermatodea_contig12159.1345.1|Name=mRNA_S-dermatodea_contig12159.1345.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=276bp
ERRLLGGQREGNRGSGSPALDPREWRTSYTRKVSPLSPLSHMRVNAWPTA
TGLLATAAQTTHQPWRSWFSLPRDGGDLNYARGGPPRQPHQPSTTGAAFA
FLPPRTPAPSPPSRQAAGRSNRGSTSPPPSSSLAHALKRALRVHSMSGSS
SVISAGEGDSLGGAGGITLWLDMRTAVLPAAQTLQTLYDDLRQRELALGR
TPEDPDWTLKRVPNPVGALLFAPEPEGRAADESNALGGALQCYELNGESD
RVLEVPSGDFIGFGFDPVAGGGGPGA
back to top