prot_S-dermatodea_contig12133.1329.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12133.1329.1
Unique Nameprot_S-dermatodea_contig12133.1329.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length168
Homology
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5JGN7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.360e-27
Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            + K+ E NARVQRWLEFLS + +TL+YRKGSANGNA FLSRL LPA D+D+T P  +   D   ++LI+ACG    +S TP VGLGGL PP P      L+L  +DF D R
Sbjct:  327 IGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIRACGRNHRSSSTPEVGLGGLRPPYPGGVFSPLALQPSDFGDFR 437          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5L3E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.470e-26
Identity = 63/118 (53.39%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    2 AKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVV-IYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIRLRESQMS 118
            AK+ E NARVQRWLE L+AY ++LEYRKGS NGNA FLSRL + A +SDR+   RLT  DD   ++ I++CGLT S     GVGLGG +P  P    GGL+ + ADF D R    ++S
Sbjct:  256 AKVGENNARVQRWLELLTAYNYSLEYRKGSPNGNADFLSRLPIDAAESDRSGRSRLTPDDDEEGVFFIRSCGLTPSGHRAVGVGLGGHVPKTPASVLGGLAPSTADFVDFRRHGPRLS 373          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.610e-26
Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    2 AKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLT-EPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            AK+ E NARVQRWLEFL+AY +TLEYRKGSANGNA FLSRL + A + DR+   RLT + D+  +  I++CGLT S     GVGLGGL+P  P    GGL+ +  DF D R
Sbjct:  652 AKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDGDEEGVSFIRSCGLTPSVHRAVGVGLGGLVPTSPTSVLGGLAPSTDDFIDFR 762          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.170e-26
Identity = 63/111 (56.76%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    2 AKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVV-IYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            AK+   NARVQRWLEFL+AY +TLEYRKGSANGNA FLSRL + A + DR+   RLT  DD   ++ I++CGLT S     GVGLGGL+P  P    GGL+ +  DF D R
Sbjct:  187 AKVGGNNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDDDEEGVFFIRSCGLTPSGHRAVGVGLGGLVPTSPTSVLGGLAPSTDDFIDFR 297          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5JDY1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.240e-25
Identity = 61/111 (54.95%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    1 MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            + K+ ERNARVQRWLEFLS + +TL+YRKGSANGNA FLSRL LPA D+D+T P  +   D   ++LI ACG    +S TP VGLGGL PP         +L  +DF D R
Sbjct:  423 IGKVGERNARVQRWLEFLSNFDYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPPCTAGVFSPPALQPSDFGDFR 533          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5KHG2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 5.640e-25
Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            + K+ E NARVQRWLEFLS + +TL+YRKGSANGNA FL RL LPA D+D+T PY +   D   ++LI ACG    +S TP VGLGGL PP         +L  +DF D R
Sbjct:  555 IGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLPRLPLPAQDTDKTGPYGIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPPCTAGVFSPPALQPSDFRDFR 665          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5JL71_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL71_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.020e-24
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    2 AKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLT-EPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIRLRESQMSIDDLDTCSQVYPVRVYNS 136
            AK+RE NARVQRWLEFL+AY +TL+YRKGSAN NA FLSRL +   + DR+   +LT + DD  ++ I++CGL  S     GVGLGGL+P  P    GGL+    DF D R    ++S   L     ++ +  + S
Sbjct:  445 AKVRENNARVQRWLEFLTAYNYTLKYRKGSANCNADFLSRLPIDEAECDRSGRSQLTPDDDDEGVFFIRSCGLMPSGHRAVGVGLGGLVPTSPTSVLGGLAPITDDFIDFRRHGPRLSPSGLSFSPGIWNIAPWPS 580          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5KIF5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.400e-24
Identity = 60/101 (59.41%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    2 AKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVV-IYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLS 101
            AK+ E NARVQRWLEFL+AY +TLEYRKGSANGNA FLSRL + A + DR+   RLT  DD   ++ I++CGLT S     GVGLGGL+P  P    GGL+
Sbjct:  824 AKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDDDEEGVFFIRSCGLTPSGHRAVGVGLGGLVPTSPTSVFGGLA 924          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5JPT7_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT7_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.930e-24
Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 0
Query:    1 MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            + K+ E NARVQRWLEFLS + +TL+YR+GSANGNA FLSRL LPA D+D T P  +   D   ++LI ACG    +S TP VGLGGL PP         +L  +DF D R
Sbjct:  217 IGKVGEHNARVQRWLEFLSNFTYTLKYRQGSANGNADFLSRLPLPAQDTDETGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPPCTAGVFSPPALQPSDFGDFR 327          
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Match: A0A6H5KKX5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX5_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.560e-24
Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    1 MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSDRTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGLSLTVADFADIR 111
            + K+ E NARVQRWLEFLS + +TL+YRKGSANGNA FLSRL LPA D+D+T P  +   D   ++LI ACG    +S TP VGLGGL PP         +L  +DF D R
Sbjct:  658 IGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPPCTAGVFSPPALQPSDFGDFR 768          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12133.1329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGN7_9PHAE4.360e-2755.86Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3E2_9PHAE2.470e-2653.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUZ4_9PHAE2.610e-2656.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAD8_9PHAE3.170e-2656.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JDY1_9PHAE3.240e-2554.95Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KHG2_9PHAE5.640e-2554.05Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JL71_9PHAE1.020e-2446.32Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KIF5_9PHAE1.400e-2459.41Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JPT7_9PHAE1.930e-2453.15RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5KKX5_9PHAE2.560e-2454.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 5..28
e-value: 4.0E-6
score: 28.7
NoneNo IPR availableGENE3D3.30.70.270coord: 29..41
e-value: 4.0E-6
score: 28.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12133contigS-dermatodea_contig12133:988..1491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12133.1329.1mRNA_S-dermatodea_contig12133.1329.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12133 576..1545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12133.1329.1 ID=prot_S-dermatodea_contig12133.1329.1|Name=mRNA_S-dermatodea_contig12133.1329.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=168bp
MAKIRERNARVQRWLEFLSAYGHTLEYRKGSANGNAVFLSRLLLPAPDSD
RTSPYRLTEPDDVVIYLIQACGLTTSTSLTPGVGLGGLLPPPPEPGSGGL
SLTVADFADIRLRESQMSIDDLDTCSQVYPVRVYNSVSIISEGPRAATKE
EREAQRHTPMTWTTCSI*
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