prot_S-dermatodea_contig1213.1326.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig1213.1326.1
Unique Name	prot_S-dermatodea_contig1213.1326.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	416

Homology

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: D7FYA9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.260e-74
Identity = 274/385 (71.17%), Postives = 288/385 (74.81%), Query Frame = 0

Query:   29 MCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSASFNALSVLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGK 413
            MCPRLGDAY RSE+V +VRADVVF RLRKVV+  L TLDASGGRLGFLP+EIRERPEM  LT++NLSRNQLFNSDHVFGIL  LK+L+KLD+TDNFFNG+LSAAAG LRELEELRLDVNQ+TELPA+VDMWT                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                        YINNNQKFSS+P S+SGLKMLR        XXXXXXXXXXXXXXXXXXX RSDKKQTCKMTPEFAAALKVRRC IRGGVIKKGKG K
Sbjct:    1 MCPRLGDAYARSEAVLDVRADVVFSRLRKVVKYGLETLDASGGRLGFLPDEIRERPEMACLTNLNLSRNQLFNSDHVFGILLGLKNLKKLDLTDNFFNGVLSAAAGRLRELEELRLDVNQITELPAAVDMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCEAFVNLQELYLYRNKITSLPPEAIPAEIGACSGLAEL-----------------YINNNQKFSSVPTSISGLKMLRELSARRCKXXXXXXXXXXXXXXXXXXXVRSDKKQTCKMTPEFAAALKVRRCNIRGGVIKKGKGKK 368

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S3YCW6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCW6_HETAK)

HSP 1 Score: 162 bits (409), Expect = 9.410e-42
Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 0

Query:    1 GGKKKGKKAAPE------RVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP 153
            GGKKKGK            V TTT YI AER R MCPRLGD YVR ++  E++ DVV  ++ K      +TLD SGG LGFLP+E+R RPE++S+T++NL++NQLFNSDHVFG++S L+ +R L+++DNF NG LS + G    + ELRLD NQ+  LP
Sbjct:    2 GGKKKGKGKKXXXXXELAEVPTTTPYIVAERERAMCPRLGDNYVRVQNSDEIKKDVVQWKIEKAAMNGASTLDISGGNLGFLPQELRTRPELQSITEINLAKNQLFNSDHVFGVVSALERIRVLNLSDNFLNGQLSDSVGLCISIRELRLDSNQLAALP 160

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: F0Y819_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y819_AURAN)

HSP 1 Score: 146 bits (369), Expect = 4.620e-36
Identity = 77/154 (50.00%), Postives = 98/154 (63.64%), Query Frame = 0

Query:   15 ITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSAS 168
            + TTR I  ER RCMCPRLGDA VRSE    +R + VF ++R+ V     TLD S   LGF+PEE+R  PE+R LT+++LSRNQLF SDHVF             ++DNFFNG LS     +  LE+L LD NQ+TELP +V  W  ++ FSA+
Sbjct:   21 VVTTRTIIRERERCMCPRLGDAAVRSERADAIRLECVFFKIRRAVVQGKETLDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDHVFSXXXXXXXXXXXXLSDNFFNGPLSERCTKMVALEDLALDGNQLTELPENVGDWKLMKRFSAA 174

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A836C9T9_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.630e-35
Identity = 67/125 (53.60%), Postives = 95/125 (76.00%), Query Frame = 0

Query:   29 MCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP 153
            MCPRLGD Y   ++  EVRAD +F RLR+ +  + +TL  + G LG LP+EIR RPE+++L +++LSRNQLFNS+ VFG+L  L+ L+KLD++DNFFNG+LS AAG L +L+ + LD N +++LP
Sbjct:    1 MCPRLGDVYKNEQAADEVRADRMFFRLRRAIHESTDTLSLANGNLGSLPDEIRTRPELQNLKELDLSRNQLFNSNQVFGVLQSLEQLQKLDLSDNFFNGVLSPAAGLLTQLQNISLDNNHISQLP 125

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S1U9P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9P1_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.950e-33
Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 0

Query:    1 GGKKKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPAS-VDMWTELRVFSASFNALSVLP 176
            G K KGK AAP  ++TT   I+A R  C+CPRLGD+    E   + R DV++ R+ K      N L+ S   L FLPE+I   PE+  +  ++LS N+LFNSDHVF IL+ L  L+KL+++ N  +G LS AA  +  LEELRLD N++T+LP + ++ W  L+VFS S N +  LP
Sbjct:    1 GKKGKGKAAAP--ILTTPAIIKA-RQTCLCPRLGDSLRNMEIADDCRMDVIYWRMNKAAERGHNALNLSHAALDFLPEDIIHIPELVGVVSLDLSYNRLFNSDHVFEILTHLPLLKKLNLSHNRLHGALSVAACRIETLEELRLDSNELTKLPETGIENWRSLKVFSVSHNRIKELP 174

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A8J2SS54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS54_9STRA)

HSP 1 Score: 137 bits (346), Expect = 8.620e-33
Identity = 74/157 (47.13%), Postives = 97/157 (61.78%), Query Frame = 0

Query:    4 KKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWT 160
            KKGK  A    I TTR +  ER RCMCPRLGDA  R E   E++ + V  R++KV     + LD S   LGF+P+E+   P +  L  V+LSRNQLF+SDHVF  L  + SL+ L++  NF NG L+  A ++  LEEL LD NQ+T LP+ +  WT
Sbjct:    6 KKGKGGADADAIVTTRAMLVERERCMCPRLGDAIERRERANEIKRECVQARIKKVGEFKRDYLDMSASGLGFVPDEVPRSPSLTRLVRVDLSRNQLFSSDHVFQSLEHITSLKILNLAHNFLNGPLTGRATDVTSLEELYLDHNQLTALPSDIGNWT 162

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S2S4U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4U1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.380e-11
Identity = 64/190 (33.68%), Postives = 89/190 (46.84%), Query Frame = 0

Query:    1 GGKKKGKKAAPERVITTTRYIEAER---LRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRS---------LTDVNLSRNQLFNSDHVFGILSCLK-SLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP-ASVDMWTELRVFSASFNALSVLP 176
            GG  KG  A  + V+  T   +A     ++  C  LG  Y      +E+R +V   RLR V   +   LD  G  LG +PEE+     + +         LT ++LS+N L  +DHVF  L+CL  +L KL+V+ N  +G L   A  L  LEEL    N +  L  A+   W+ LR    S N L  LP
Sbjct:   24 GGHSKGSAAELDPVVIVTSAQQARERSHIQRECIPLGRRYSVLCRAQEIRREVAESRLRAVYSRSAECLDLRGLDLGHVPEELAALSRLEADIEPAGWNGLTALDLSKNSLNTTDHVFQALACLGGTLLKLNVSANELSGPLPDTARALTHLEELDASRNHIARLTDAAAAGWSRLRKLDLSRNELVGLP 213

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: F0YRJ7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRJ7_AURAN)

HSP 1 Score: 70.5 bits (171), Expect = 7.310e-10
Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 0

Query:   66 LDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSAS 168
            LD S   LGF+PEE+R  PE+R LT+++LSRNQLF SDH      C K +                       LE+L LD NQ+TELP +V  W  ++ FSA+
Sbjct:    1 LDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDH-----RCTKMVA----------------------LEDLALDGNQLTELPENVGDWKLMKRFSAA 76

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S3M0U8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0U8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.520e-8
Identity = 37/88 (42.05%), Postives = 44/88 (50.00%), Query Frame = 0

Query:  327 YINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGKK 414
            Y++NN KFS  P S   L+ L+                            R+ KKQ CK+TPE  AALK R C +RGGVIKK KGGKK
Sbjct:  185 YLSNNAKFSYFPGSAGHLRRLKELSLAKCPALKALPNTTSEMTALRELDLRAAKKQVCKITPELVAALKERFCKVRGGVIKKAKGGKK 272

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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A482RSJ2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSJ2_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 3.210e-7
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0

Query:  327 YINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGKK 414
            Y++NN KFS  P+S        XXXXXXXXXXXXXXXXXXXXXXXXXX  R+ KKQ CK+TPE   ALK   C IRGGV+KKGKGGKK
Sbjct:   23 YVSNNPKFSYFPSSAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRTAKKQVCKITPELVDALKQHFCKIRGGVVKKGKGGKK 110

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D7FYA9_ECTSI	1.260e-74	71.17	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A7S3YCW6_HETAK	9.410e-42	52.83	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
F0Y819_AURAN	4.620e-36	50.00	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A836C9T9_9STRA	6.630e-35	53.60	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]
A0A7S1U9P1_9STRA	2.950e-33	45.20	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A8J2SS54_9STRA	8.620e-33	47.13	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S2S4U1_9STRA	6.380e-11	33.68	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
F0YRJ7_AURAN	7.310e-10	41.75	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A7S3M0U8_9STRA	1.520e-8	42.05	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A482RSJ2_9ARCH	3.210e-7	68.18	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 159..182 e-value: 170.0 score: 3.3 coord: 112..135 e-value: 250.0 score: 1.8 coord: 274..296 e-value: 0.72 score: 18.9 coord: 136..158 e-value: 17.0 score: 11.4 coord: 297..320 e-value: 0.34 score: 20.0 coord: 228..251 e-value: 6.6 score: 14.7
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 37..408 e-value: 1.6E-70 score: 239.3
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 230..287 e-value: 1.8E-7 score: 30.8
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 138..159 score: 5.964
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 276..297 score: 7.127
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 299..320 score: 6.095
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 62..83 score: 4.971
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 230..251 score: 6.095
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 184..204 score: 5.063
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 88..109 score: 4.816
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 230..380
None	No IPR available	PANTHER	PTHR16083:SF18		coord: 109..271
None	No IPR available	PANTHER	PTHR16083:SF18		coord: 230..380
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 207..293
None	No IPR available	PANTHER	PTHR16083:SF18		coord: 207..293
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 109..271
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 61..381

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig1213	contig	S-dermatodea_contig1213:13134..20219 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig1213.1326.1	mRNA_S-dermatodea_contig1213.1326.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig1213 13134..20219 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig1213.1326.1 ID=prot_S-dermatodea_contig1213.1326.1|Name=mRNA_S-dermatodea_contig1213.1326.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=416bp
GGKKKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADV
VFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLF
NSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVT
ELPASVDMWTELRVFSASFNALSVLPPQVGDWRNLEDINVRNNELRVLPL
EMAKWAKLKRVLAGGNGILELPAEVGECTELTVLDLRANALTALPPELAR
CTALEVLHVGANKIAAFQQELCELVNLRELFLYRNKIDYLPPEVGCLSRL
VKLSVSGNNIKAIPVEIGACVCLTELYINNNQKFSSMPASMSGLKMLREL
SARRCKALKSLPAEIANCESLRELDVRSDKKQTCKMTPEFAAALKVRRCT
IRGGVIKKGKGGKKA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt