mRNA_S-dermatodea_contig1213.1326.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1213.1326.1
Unique NamemRNA_S-dermatodea_contig1213.1326.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: D7FYA9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.260e-74
Identity = 274/385 (71.17%), Postives = 288/385 (74.81%), Query Frame = 1 
Query:   85 MCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSASFNALSVLPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGK 1239
            MCPRLGDAY RSE+V +VRADVVF RLRKVV+  L TLDASGGRLGFLP+EIRERPEM  LT++NLSRNQLFNSDHVFGIL  LK+L+KLD+TDNFFNG+LSAAAG LRELEELRLDVNQ+TELPA+VDMWT                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                        YINNNQKFSS+P S+SGLKMLR        XXXXXXXXXXXXXXXXXXX RSDKKQTCKMTPEFAAALKVRRC IRGGVIKKGKG K
Sbjct:    1 MCPRLGDAYARSEAVLDVRADVVFSRLRKVVKYGLETLDASGGRLGFLPDEIRERPEMACLTNLNLSRNQLFNSDHVFGILLGLKNLKKLDLTDNFFNGVLSAAAGRLRELEELRLDVNQITELPAAVDMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCEAFVNLQELYLYRNKITSLPPEAIPAEIGACSGLAEL-----------------YINNNQKFSSVPTSISGLKMLRELSARRCKXXXXXXXXXXXXXXXXXXXVRSDKKQTCKMTPEFAAALKVRRCNIRGGVIKKGKGKK 368
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S3YCW6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCW6_HETAK)

HSP 1 Score: 162 bits (409), Expect = 9.410e-42
Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 1 
Query:    1 GGKKKGKKAAPE------RVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP 459
            GGKKKGK            V TTT YI AER R MCPRLGD YVR ++  E++ DVV  ++ K      +TLD SGG LGFLP+E+R RPE++S+T++NL++NQLFNSDHVFG++S L+ +R L+++DNF NG LS + G    + ELRLD NQ+  LP
Sbjct:    2 GGKKKGKGKKXXXXXELAEVPTTTPYIVAERERAMCPRLGDNYVRVQNSDEIKKDVVQWKIEKAAMNGASTLDISGGNLGFLPQELRTRPELQSITEINLAKNQLFNSDHVFGVVSALERIRVLNLSDNFLNGQLSDSVGLCISIRELRLDSNQLAALP 160
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: F0Y819_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y819_AURAN)

HSP 1 Score: 146 bits (369), Expect = 4.620e-36
Identity = 77/154 (50.00%), Postives = 98/154 (63.64%), Query Frame = 1 
Query:   43 ITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSAS 504
            + TTR I  ER RCMCPRLGDA VRSE    +R + VF ++R+ V     TLD S   LGF+PEE+R  PE+R LT+++LSRNQLF SDHVF             ++DNFFNG LS     +  LE+L LD NQ+TELP +V  W  ++ FSA+
Sbjct:   21 VVTTRTIIRERERCMCPRLGDAAVRSERADAIRLECVFFKIRRAVVQGKETLDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDHVFSXXXXXXXXXXXXLSDNFFNGPLSERCTKMVALEDLALDGNQLTELPENVGDWKLMKRFSAA 174
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A836C9T9_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.630e-35
Identity = 67/125 (53.60%), Postives = 95/125 (76.00%), Query Frame = 1 
Query:   85 MCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP 459
            MCPRLGD Y   ++  EVRAD +F RLR+ +  + +TL  + G LG LP+EIR RPE+++L +++LSRNQLFNS+ VFG+L  L+ L+KLD++DNFFNG+LS AAG L +L+ + LD N +++LP
Sbjct:    1 MCPRLGDVYKNEQAADEVRADRMFFRLRRAIHESTDTLSLANGNLGSLPDEIRTRPELQNLKELDLSRNQLFNSNQVFGVLQSLEQLQKLDLSDNFFNGVLSPAAGLLTQLQNISLDNNHISQLP 125
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S1U9P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9P1_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.950e-33
Identity = 80/177 (45.20%), Postives = 111/177 (62.71%), Query Frame = 1 
Query:    1 GGKKKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPAS-VDMWTELRVFSASFNALSVLP 528
            G K KGK AAP  ++TT   I+A R  C+CPRLGD+    E   + R DV++ R+ K      N L+ S   L FLPE+I   PE+  +  ++LS N+LFNSDHVF IL+ L  L+KL+++ N  +G LS AA  +  LEELRLD N++T+LP + ++ W  L+VFS S N +  LP
Sbjct:    1 GKKGKGKAAAP--ILTTPAIIKA-RQTCLCPRLGDSLRNMEIADDCRMDVIYWRMNKAAERGHNALNLSHAALDFLPEDIIHIPELVGVVSLDLSYNRLFNSDHVFEILTHLPLLKKLNLSHNRLHGALSVAACRIETLEELRLDSNELTKLPETGIENWRSLKVFSVSHNRIKELP 174
[Close]
BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A8J2SS54_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS54_9STRA)

HSP 1 Score: 137 bits (346), Expect = 8.620e-33
Identity = 74/157 (47.13%), Postives = 97/157 (61.78%), Query Frame = 1 
Query:   10 KKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWT 480
            KKGK  A    I TTR +  ER RCMCPRLGDA  R E   E++ + V  R++KV     + LD S   LGF+P+E+   P +  L  V+LSRNQLF+SDHVF  L  + SL+ L++  NF NG L+  A ++  LEEL LD NQ+T LP+ +  WT
Sbjct:    6 KKGKGGADADAIVTTRAMLVERERCMCPRLGDAIERRERANEIKRECVQARIKKVGEFKRDYLDMSASGLGFVPDEVPRSPSLTRLVRVDLSRNQLFSSDHVFQSLEHITSLKILNLAHNFLNGPLTGRATDVTSLEELYLDHNQLTALPSDIGNWT 162
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S2S4U1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4U1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 6.380e-11
Identity = 64/190 (33.68%), Postives = 89/190 (46.84%), Query Frame = 1 
Query:    1 GGKKKGKKAAPERVITTTRYIEAER---LRCMCPRLGDAYVRSESVREVRADVVFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRS---------LTDVNLSRNQLFNSDHVFGILSCLK-SLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELP-ASVDMWTELRVFSASFNALSVLP 528
            GG  KG  A  + V+  T   +A     ++  C  LG  Y      +E+R +V   RLR V   +   LD  G  LG +PEE+     + +         LT ++LS+N L  +DHVF  L+CL  +L KL+V+ N  +G L   A  L  LEEL    N +  L  A+   W+ LR    S N L  LP
Sbjct:   24 GGHSKGSAAELDPVVIVTSAQQARERSHIQRECIPLGRRYSVLCRAQEIRREVAESRLRAVYSRSAECLDLRGLDLGHVPEELAALSRLEADIEPAGWNGLTALDLSKNSLNTTDHVFQALACLGGTLLKLNVSANELSGPLPDTARALTHLEELDASRNHIARLTDAAAAGWSRLRKLDLSRNELVGLP 213
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: F0YRJ7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRJ7_AURAN)

HSP 1 Score: 70.5 bits (171), Expect = 7.310e-10
Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 1 
Query:  196 LDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLFNSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVTELPASVDMWTELRVFSAS 504
            LD S   LGF+PEE+R  PE+R LT+++LSRNQLF SDH      C K +                       LE+L LD NQ+TELP +V  W  ++ FSA+
Sbjct:    1 LDLSRSNLGFVPEELRTVPELRKLTELDLSRNQLFGSDH-----RCTKMVA----------------------LEDLALDGNQLTELPENVGDWKLMKRFSAA 76
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BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A7S3M0U8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M0U8_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.520e-8
Identity = 37/88 (42.05%), Postives = 44/88 (50.00%), Query Frame = 1 
Query:  979 YINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGKK 1242
            Y++NN KFS  P S   L+ L+                            R+ KKQ CK+TPE  AALK R C +RGGVIKK KGGKK
Sbjct:  185 YLSNNAKFSYFPGSAGHLRRLKELSLAKCPALKALPNTTSEMTALRELDLRAAKKQVCKITPELVAALKERFCKVRGGVIKKAKGGKK 272
[Close]
BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Match: A0A482RSJ2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSJ2_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 3.210e-7
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 1 
Query:  979 YINNNQKFSSMPASMSGLKMLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDKKQTCKMTPEFAAALKVRRCTIRGGVIKKGKGGKK 1242
            Y++NN KFS  P+S        XXXXXXXXXXXXXXXXXXXXXXXXXX  R+ KKQ CK+TPE   ALK   C IRGGV+KKGKGGKK
Sbjct:   23 YVSNNPKFSYFPSSAGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRTAKKQVCKITPELVDALKQHFCKIRGGVVKKGKGGKK 110
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1213.1326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FYA9_ECTSI1.260e-7471.17Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7S3YCW6_HETAK9.410e-4252.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y819_AURAN4.620e-3650.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836C9T9_9STRA6.630e-3553.60Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A7S1U9P1_9STRA2.950e-3345.20Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SS54_9STRA8.620e-3347.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2S4U1_9STRA6.380e-1133.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YRJ7_AURAN7.310e-1041.75Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3M0U8_9STRA1.520e-842.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482RSJ2_9ARCH3.210e-768.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1213contigS-dermatodea_contig1213:13134..20219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.1
Seed ortholog evalue7.5e-63
Seed eggNOG ortholog2880.D7FYA9
KEGG koko:K19613
KEGG Pathwayko04014,map04014
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-24_003160.1
Exons10
Model size1248
Cds size1248
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1213.1326.1prot_S-dermatodea_contig1213.1326.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1213 13134..20219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924232.500294-CDS-S-dermatodea_contig1213:13133..133201622924232.500294-CDS-S-dermatodea_contig1213:13133..13320Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 13134..13320 -
1694079111.97343-CDS-S-dermatodea_contig1213:13133..133201694079111.97343-CDS-S-dermatodea_contig1213:13133..13320Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 13134..13320 -
1622924232.5115712-CDS-S-dermatodea_contig1213:14454..145161622924232.5115712-CDS-S-dermatodea_contig1213:14454..14516Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 14455..14516 -
1694079111.9852965-CDS-S-dermatodea_contig1213:14454..145161694079111.9852965-CDS-S-dermatodea_contig1213:14454..14516Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 14455..14516 -
1622924232.5232604-CDS-S-dermatodea_contig1213:14934..150001622924232.5232604-CDS-S-dermatodea_contig1213:14934..15000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 14935..15000 -
1694079111.9952116-CDS-S-dermatodea_contig1213:14934..150001694079111.9952116-CDS-S-dermatodea_contig1213:14934..15000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 14935..15000 -
1622924232.5339365-CDS-S-dermatodea_contig1213:15673..157271622924232.5339365-CDS-S-dermatodea_contig1213:15673..15727Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 15674..15727 -
1694079112.0046275-CDS-S-dermatodea_contig1213:15673..157271694079112.0046275-CDS-S-dermatodea_contig1213:15673..15727Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 15674..15727 -
1622924232.5465963-CDS-S-dermatodea_contig1213:16229..164361622924232.5465963-CDS-S-dermatodea_contig1213:16229..16436Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 16230..16436 -
1694079112.015559-CDS-S-dermatodea_contig1213:16229..164361694079112.015559-CDS-S-dermatodea_contig1213:16229..16436Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 16230..16436 -
1622924232.5590198-CDS-S-dermatodea_contig1213:17041..171791622924232.5590198-CDS-S-dermatodea_contig1213:17041..17179Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 17042..17179 -
1694079112.02379-CDS-S-dermatodea_contig1213:17041..171791694079112.02379-CDS-S-dermatodea_contig1213:17041..17179Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 17042..17179 -
1622924232.5706754-CDS-S-dermatodea_contig1213:17896..179861622924232.5706754-CDS-S-dermatodea_contig1213:17896..17986Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 17897..17986 -
1694079112.0322402-CDS-S-dermatodea_contig1213:17896..179861694079112.0322402-CDS-S-dermatodea_contig1213:17896..17986Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 17897..17986 -
1622924232.582407-CDS-S-dermatodea_contig1213:18448..185451622924232.582407-CDS-S-dermatodea_contig1213:18448..18545Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 18449..18545 -
1694079112.0407765-CDS-S-dermatodea_contig1213:18448..185451694079112.0407765-CDS-S-dermatodea_contig1213:18448..18545Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 18449..18545 -
1622924232.599242-CDS-S-dermatodea_contig1213:19147..193231622924232.599242-CDS-S-dermatodea_contig1213:19147..19323Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 19148..19323 -
1694079112.0499253-CDS-S-dermatodea_contig1213:19147..193231694079112.0499253-CDS-S-dermatodea_contig1213:19147..19323Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 19148..19323 -
1622924232.6118987-CDS-S-dermatodea_contig1213:20048..202191622924232.6118987-CDS-S-dermatodea_contig1213:20048..20219Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 20049..20219 -
1694079112.0616608-CDS-S-dermatodea_contig1213:20048..202191694079112.0616608-CDS-S-dermatodea_contig1213:20048..20219Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1213 20049..20219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1213.1326.1

>prot_S-dermatodea_contig1213.1326.1 ID=prot_S-dermatodea_contig1213.1326.1|Name=mRNA_S-dermatodea_contig1213.1326.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=416bp
GGKKKGKKAAPERVITTTRYIEAERLRCMCPRLGDAYVRSESVREVRADV
VFHRLRKVVRLNLNTLDASGGRLGFLPEEIRERPEMRSLTDVNLSRNQLF
NSDHVFGILSCLKSLRKLDVTDNFFNGMLSAAAGNLRELEELRLDVNQVT
ELPASVDMWTELRVFSASFNALSVLPPQVGDWRNLEDINVRNNELRVLPL
EMAKWAKLKRVLAGGNGILELPAEVGECTELTVLDLRANALTALPPELAR
CTALEVLHVGANKIAAFQQELCELVNLRELFLYRNKIDYLPPEVGCLSRL
VKLSVSGNNIKAIPVEIGACVCLTELYINNNQKFSSMPASMSGLKMLREL
SARRCKALKSLPAEIANCESLRELDVRSDKKQTCKMTPEFAAALKVRRCT
IRGGVIKKGKGGKKA*
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mRNA from alignment at S-dermatodea_contig1213:13134..20219-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1213.1326.1 ID=mRNA_S-dermatodea_contig1213.1326.1|Name=mRNA_S-dermatodea_contig1213.1326.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7086bp|location=Sequence derived from alignment at S-dermatodea_contig1213:13134..20219- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGAGGGAAAAAGAAGGGCAAAAAGGCGGCCCCGGAGCGAGTTATTACCAC
GACGCGATATATTGAGGCGGAGCGGTTACGCTGCATGTGTCCCCGTCTCG
GGGACGCCTACGTCAGATCGGAGAGCGTTCGGGAGGTGCGGGCGGACGTC
GTATTCCACCGCTTGAGAAAGGTGAGGACGTGTGAGCCAAGAAGGTGTCT
TCGCAGTGTCGAAGATGCAGGATAGTGTGCTTGTTTGTCTACTCGCGTGC
TTGTACTCCGATGCTGCTCCATTCCCGAAGGCCGCGAAGGCTGTCTCGAT
GTTCACTGAAACGGAACATACCGATTAGGGCTAAGTTAAATGCGAGAAAT
CGCGGGGGGCGGTCGGTCCAGGCCGGGCGCTTCCCGAATGGGGCCGGCCG
ATGGCATATGTGCAACGTAGCTGGTCTTGTGACTAGGATGACCCGCATCT
CTGTCTCCCACGCGCCCGCCCTTAGGCAAGGCATTCATGACACGACGACG
CAGGGAGTGCTGCCTTGATTGATTCGATTGATTGGTTGATTGATTATCAC
AGTTACAACCGGCCAGCCCACCAATGGTTGCCGATCCCACTCGTGGCCAG
ATGAGAAATCGAGAGGTCGGAAAAAACCTACGGAACTACCTATATTAGAT
AGTACATGCAAATAAGCACTTGACATGTACCATCATGACTCGGAAACAGA
TGGAGCATACCTCGGAACTTGGGCCTGCTAAAAACAAAACCGTCCCCTCT
GCTATAGGGAGGGCTCAGCGCCCCCGCCTGTGGGATCTAAATCCATGTTG
ACAAAAAGGCGGCCAAAGCTAATCTCCCTCCCCGGCAACAACAAGCGCCA
CATCAAAGCAGACTCAGCGCATGCCTTCACGATCGGAATACCTCAGGTTG
TTAGATTAAATCTCAATACCTTGGACGCCTCGGGGGGGCGACTGGGTTTT
TTGCCTGAGGAGATTCGAGAGCGGCCCGAGATGCGAAGCCTCACCGATGT
CAATCTCAGCCGGAATCAGCTTTTCAACAGCGACCACGTTTTTGGCATCC
TTTCTTGCCTCAAGAGTCTCAGGTGAAGACAAGCGGGGGGGGCGACGTAG
GCGATGCTGTTGAAACGCTGTTCTTGCGGTTTGCGGAAACGAGCTGGGAA
CTGTATCGAGCTCAAAGGTGCTGCACTGTTGTATCGAGCTTCTTGTGGAG
AGGTATGTGGTGGCGGGGAAAAGCTGTCAGAGATTTCCACGGTCGCGGAG
GTACTCTTGAGTGGCACCGGACGAATCTCACTGAAGAGTACCACGTCGGG
CAAATCGCTGACCAAACTCTGCGCAAGGGTTCAAATGGAAGGCATCGATA
TCCAGCAGTCGCTTATCCACCGCAATGGTATTCTGTTCGAAAATCGCGGA
ACCGCAGAGCAGTACGTACATGGAGATGTTTTTTTTCCGAGTCCCTGTTT
CCTGGCGATGAAAGGCGGGGCCAAAAGCGCGGTGAGAGCCGTGCTGGTCC
AGCGTACCACAGTAGCCGTTCTTGCATTCCATCGACAGGAAATCCGGGAG
GATTGAGAAGGAGGTCGTTTCCTGACGTAAAAAGTCGCAACAATGTATGT
TTTTTCTCAACTACCGACCCAACCACTTGCCACACGTCAACATGCCACGA
CAACGAAAAAAACGACCAACACAGGAAGCTGGATGTGACGGACAATTTTT
TCAACGGCATGCTGTCCGCGGCGGCGGGCAACCTTCGCGAGCTAGAGGAG
CTCCGCCTTGACGTCAATCAGGTTGAGGCCGCCTTGCGCATCGCTCTCTC
CGGCGCCTTGGGTTGTTTTGTAAACGCTTACAAAAGCCTTTCCCCGACAA
AAGCAGACGGGCTGTTGTGGTAAGAGGAACACTGCCGTGAGAAAAGCACA
CGGACAGAGCGGGAAATTACCCATTCAGGAGCCATAAGGGCACCTGTTCA
CCAAAGTCCGTTGCCGTACCTAATACGTATGGCGTAGATGGCCTTTGTGT
GGCGTCAAACCATGATCGACACTGAGCTAAGCGCACCTCGTCTGTCCCGT
ACAGGTGGTAGGGTGGCTGGCGCAAATAATTTTGCAAGCCACCGAATCAG
ACCTTTTCTTCCTTCAGACGACCGATAGCGCTTGTAATCGTTCCCTGGGA
GAGGGGTGATACTCCATATACTGGTAACGTGAACAAGAAAATATATGCTG
TCGTTCCCCCTACAACCGCCGGTTTGAGTGCAGGTGACGGAATTACCGGC
CTCGGTGGATATGTGGACGGAACTGCGAGTGTTCAGTGCATCTTTCAACG
CTCTGTCGGTCCTGCCTCCGCAGGTGTCACTCGGGAAAATAATCCGTCCT
TGCAGACCGCAGACCGTAGCTTTTCGTTTTGTTGGATACAGAGAAATGGA
CCGTGAAATCCGGACGTATATATAACGCTGGTCTCCCTTACCTCGCGCTT
TGACGCAAACGACTTCGATCGAACACGGCGTTCTGTCGTTGAACTCTGAA
CGGGTGCTCGCCCTGCGGCCCGCTCCGGGGGTGGCGGAGAGGGGAGAATT
CATCTCGATACGCCTCTCGCCAGAACGGTTTTCGCACAGCTGTTGGGTCC
CCTCGGGTGCAAGCATTCACAAGCCGGACTTCATGTGTTTACTTTTCCCA
CGAATCAATTTTGGCTTTTAGAGAACGTTGATACTTTTCGCTTCGGACTG
ATTTTGCGACTAACGAGCTATGGGTGGGCTTCCTGCTTGAGTAGGCAAGT
GACCAGCTGATGTTGGTCGCAGCGCCGGTTTTGTCCGAAGACAGTTTACC
TCGCAAGGTGGAAGGGAAGCGGCTGTGCGATAGGACACCCCACTCCGGTT
GCTCTTCTCTCGCGTGACTTAAATAATGATACGTCATATATAGCCGTGCC
TGTATTCAATTTGTGCCACTGCTATACATAGCTACCCTGAGAACGTGAAG
CGGAACCCAGACTTGCGAGCGGCTGAAGCTCGTTGTAAACATACTGGTGA
CATCGATCGCCGTTCGCCGCAATATTCGCGTTTCGCACAGGTCGGGGACT
GGCGCAACTTGGAGGACATAAACGTGCGCAACAACGAGCTGCGAGTGCTT
CCACTGGAGATGGCAAAGTGGGCCAAGCTGAAACGAGTTCTGGCGGGGGG
AAACGGCATTCTGGAGCTCCCAGCAGAGGTAATGGGGCTGGAGTTGCTGG
TCTCAAAAGTGTATCGCAAGACGAGGTAGCGTTCGAGTTTGTCGGGTAGA
CGGATTTCGACGATACAGAAAGGTGCGACTGACAAACAAAACCGAAAAAA
CGGAGTGTAGCGAAAGAGGTAGATACCTTTCAACGGGGGGGGTGCGCACG
ATAATGACAAAAATTACTCGCCTGGACCATGTTTTACTGAGGATATTTTC
TTTCGGGCCGACGTGAAACTATCTCAGTTTTGTGTATAACAAAATCCACC
TGGGTCCTGTCCCGATGAGTTATGGATTGTACACTTTCTGTGTTCTGGTG
CGTTATAAAATTTCAATTGACGCAACACTTGAGATCCTGTTTCCAAACGA
ATGTACTATTCACATACGCGATATCGGAAACCGGGGTGCGCATCGTACCC
TGGCTTAGGTACTTCGGCCTTCACGACCCCGACGTGCACATATTGCGCTC
TGGTTGTTAGCGCCTTCGCGTCGGCAGTATGCGAAGCTCCCGACGGGCGT
AGCAACTACGACGATTTGTTCCAACTTATGCAAAACATTGTGTACCAACA
TCGAATTCGCACGGGCGGTGTCTCGCACGATAGGTGGGCGAGTGCACAGA
ACTGACGGTCCTAGATCTCCGAGCAAACGCCCTAACGGCGTTGCCCCCCG
AGCTTGCCCGCTGCACGGCGTTGGAGGTCCTACACGTGGGGGCAAACAAG
ATAGCGGCGTTTCAGCAGGAGCTGTGCGAGCTGGTGAACCTGCGAGAGTT
GTTCCTATATCGGAACAAGATCGACTACTTGCCGCCGGAGGTACGATTCT
CTGAGGGTGGAAACGACGACGTTAAATTTATGTGCTGCTGATAGGTGCAA
AATATTATTAATAGGCGGGTTTCGGCGTACGCATTACTTTGAGGTATGTA
GTTGAGGGCGATAAAAATTTGTTCGAGATTACGAGTATGGAAACGAGGCT
TCAAATCGATCGTTATGGTTTCGTTGTGGACGCGATCGAGCTCTCTCTGC
CGAAGGAATGCATGCGAAAATCGAGAAAACCGAGGGTGGCCTTCCTGTTC
TAGTAAAGACACACAATTTTCGCCTCCTTGATGGACCCTCTTTATGATGA
CTAGGGGCGTAATGAGAGCACTATTTTCGCGGCTCTGTACAGCCGGTGCG
CAGTTTTCTGTACACGACCATCTTCGAAGCTGACCGCTAGCGTTTGCACA
CGTCTGCGCGTGTACCTCGCAATCTACCTATATCACCCCCGTTGGAAACC
AAATATCCACCCTAAATTGCTCCGTGGCTTGCCCGATGCCAGGTGGGTTG
CCTGTCCAGGCTCGTGAAACTTTCCGTGAGCGGGAACAATATCAAGGTAA
ATTATATAACCCATGCGCAGCGTGCATGTTCACCAGCTCCCGTTGTTGTT
GTAGAGCAATGGAATACTTTCAGGCCCTACCTCTGGACGAATGCGACATT
TGTTACTGTAGGCGTACGATCCTTCAGGTTTTCTGAGCAGAAAGCGTTGT
CTGGCTTCCTCTACTTGATTGCTACGTCGGCTTGAAAGTGCGCTGAGTTA
TGGCCATGCCGCATTCGACAAGATTCAAAACGGTAGGCGACATCTTGCAG
TAATGTAATATTTCGAAGCACATATGACGTCAATTGCAAGCTGGGGTTCG
ACAGATGGCGGAGCTCAATTCAACTGTACATGGATATGGCGTATATCGGA
GAGCAACGACACTATTGACAAAACGACGGATGGATTAGTCTGAGTTGAAG
TACGAGATGAAAAATGTTATCGGACTACCCCGGACGCCGGCACAAGCCTT
TCGCTATTTTTGTTTAAATAAAGAAACCGAGCACAAAAAGTGTACAATCC
ATTTACTCATTTATATGTCTGTGCGCCAAGGAAAAAAGCTTTCGCGTCGA
GCCCGATTAGTTTACCTTCAAGGGTTTGCTCGACGTGCATGTGGAAACGC
TTACCAACCACAACCCCACCGTACACACCCCTTTGTGTGCAACTCCCTTT
CGCACCCGGAAATAATCAGGCAATTCCGGTTGAGATCGGCGCTTGCGTTT
GTTTGACGGAGCTGTACATCAACAACAACCAAAAGGTGACCTACAGTACT
GCTTATCAGGCGCAATTTACCATCCAGTATTCCCTCCGCCAGGACAGGCC
GATCATTGCAACCGTCATCGCACACACCGTAGTGCTCAGTGGCTTATTCT
TGCGTCCATCCAAGTGCGTAGCGGGCAAATAAACAGTATGATACCACGCA
TCACTAGGGCTACGCCCATGCATCTCGGCCAGAACACGCTGCGAAATGAT
GCAACCGCCAGTCGAAATCACACCCGAGGCGGGCAAGAGGGCGCGGCCTA
CTCCGATTTCACAACAGGCTTGATGCGGCGCAGAAAAGCCACAAACCGCT
GACAACCGTAGTAACCTATTTACCTTAAGACGAACTGAACTGGGGGCCTA
TTTTCTCCGCTTCACCATGATCGCCATCTTCGTCTGTATCAATGATTATG
CAGTTTTCGTCGATGCCGGCGTCGATGAGCGGCTTGAAGATGCTGAGGGA
GCTATCCGCTCGACGGTGAGAGCAAAAAACAGGGCAGTTGATGTCAATGC
TAAGCTGCGAGTTCGTGCATCTAGAGAGAGAACACTCTACGCTGAGAGCT
GTTTTTAGCGAACGCCCTGTGCTTCACCTTTTTGGCGAAGGTCAATGCGT
CGTTTTCACGAAGACCAGATTCCACGGCTCAGACAAAACAAAATCAAGAG
CACCGTACTGCTTGAATTGAAAATCTCCCTTGAAAGCTGAACGACCTCAT
TGCGAGGAAACTGAGGTTACAGAGGCGATTCTACACTTTGAGGTTTGGGG
AAATGCCCTTTTTTTTCTTCTATAGAAACGGCTCTTGGACCATTGTCAGG
GTTTGACCGTCCTGGGATTGTGCAGGGAACGCGGACAGGCGAACGTGTGT
TACACACAGAGGTTTTCTCGTGCTTGTGGATGCGTACAGCTGATCTTGCT
GACGGACTGCCCGACAAAGTGCACAGCGTTTCCTGGGTGGGAGGGCAACA
TGGCGGTCGTGACAAGATACAAGTAACTTCAGCGAGGGGTTGGAAACAAA
CGCTTCCGACCGTAACGTGTTCGTCAGACAAGTAGGTTTAAAATCGCGCA
AGAAGGACCTAGACGTGTGTACAACGGATTTTGCCATTCTCTTGCGGCAT
AAGAAAATCACGGTGTAGCCGACAAACTCTTGGCTGCACCGGACAACGGG
TCGCCGTCTTGAAGACTACGCTAGGCTCGTCAAGTAAAGCAGTTCAAACC
TATGACACCCGAAGTAAAAAAGACACGAAACATTGTTGGTTCAGTCTCGA
CCCAGACAGGCTGGGGAGGCAGAACGCCGTACACTGACCAAAGTTATTGA
GCGCATTGTGCTGGTGCTGGTTCAGGCGTTTTTCCTGATAATACCAATGT
CAGTATTGCAGCTTTCGTGGCCAAATAAATGCATAAGGCGACAGAGGTGC
TAGAATGCCGGGTTTTTGTTTTTGTGTTTCGACTGAATCATACCAAAGAC
GCAATACTGCTCAGGATGAAGTATGCGTTGAGGCCTTTTCCGCTCTGTGT
CGAGTGTGGAACAATGCGCACCCGAGCAGGTGACATGGCAAATGTAGAGT
TGACGGAGACCTTTTATCCACTGATCGCTCGTTCACGTGGACATGGCAGG
TGCAAGGCGCTCAAGTCGCTTCCGGCAGAGATCGCGAATTGTGAGAGCCT
TAGGGAGCTCGACGTGCGCTCGGACAAGAAACAAACGTGCAAGATGACAC
CGGAATTCGCGGCCGCTCTCAAAGTGCGCCGCTGCACGATAAGAGGCGGC
GTCATCAAAAAGGGGAAAGGGGGAAAGAAAGCGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1213:13134..20219-

>mRNA_S-dermatodea_contig1213.1326.1 ID=mRNA_S-dermatodea_contig1213.1326.1|Name=mRNA_S-dermatodea_contig1213.1326.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at S-dermatodea_contig1213:13134..20219- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGAGGGAAAAAGAAGGGCAAAAAGGCGGCCCCGGAGCGAGTTATTACCAC
GACGCGATATATTGAGGCGGAGCGGTTACGCTGCATGTGTCCCCGTCTCG
GGGACGCCTACGTCAGATCGGAGAGCGTTCGGGAGGTGCGGGCGGACGTC
GTATTCCACCGCTTGAGAAAGGGAGGGAAAAAGAAGGGCAAAAAGGCGGC
CCCGGAGCGAGTTATTACCACGACGCGATATATTGAGGCGGAGCGGTTAC
GCTGCATGTGTCCCCGTCTCGGGGACGCCTACGTCAGATCGGAGAGCGTT
CGGGAGGTGCGGGCGGACGTCGTATTCCACCGCTTGAGAAAGGTTGTTAG
ATTAAATCTCAATACCTTGGACGCCTCGGGGGGGCGACTGGGTTTTTTGC
CTGAGGAGATTCGAGAGCGGCCCGAGATGCGAAGCCTCACCGATGTCAAT
CTCAGCCGGAATCAGCTTTTCAACAGCGACCACGTTTTTGGCATCCTTTC
TTGCCTCAAGAGTCTCAGGTTGTTAGATTAAATCTCAATACCTTGGACGC
CTCGGGGGGGCGACTGGGTTTTTTGCCTGAGGAGATTCGAGAGCGGCCCG
AGATGCGAAGCCTCACCGATGTCAATCTCAGCCGGAATCAGCTTTTCAAC
AGCGACCACGTTTTTGGCATCCTTTCTTGCCTCAAGAGTCTCAGGAAGCT
GGATGTGACGGACAATTTTTTCAACGGCATGCTGTCCGCGGCGGCGGGCA
ACCTTCGCGAGCTAGAGGAGCTCCGCCTTGACGTCAATCAGGAAGCTGGA
TGTGACGGACAATTTTTTCAACGGCATGCTGTCCGCGGCGGCGGGCAACC
TTCGCGAGCTAGAGGAGCTCCGCCTTGACGTCAATCAGGTGACGGAATTA
CCGGCCTCGGTGGATATGTGGACGGAACTGCGAGTGTTCAGTGCATCTTT
CAACGCTCTGTCGGTCCTGCCTCCGCAGGTGACGGAATTACCGGCCTCGG
TGGATATGTGGACGGAACTGCGAGTGTTCAGTGCATCTTTCAACGCTCTG
TCGGTCCTGCCTCCGCAGGTCGGGGACTGGCGCAACTTGGAGGACATAAA
CGTGCGCAACAACGAGCTGCGAGTGCTTCCACTGGAGATGGCAAAGTGGG
CCAAGCTGAAACGAGTTCTGGCGGGGGGAAACGGCATTCTGGAGCTCCCA
GCAGAGGTCGGGGACTGGCGCAACTTGGAGGACATAAACGTGCGCAACAA
CGAGCTGCGAGTGCTTCCACTGGAGATGGCAAAGTGGGCCAAGCTGAAAC
GAGTTCTGGCGGGGGGAAACGGCATTCTGGAGCTCCCAGCAGAGGTGGGC
GAGTGCACAGAACTGACGGTCCTAGATCTCCGAGCAAACGCCCTAACGGC
GTTGCCCCCCGAGCTTGCCCGCTGCACGGCGTTGGAGGTCCTACACGTGG
GGGCAAACAAGATAGCGGCGTTTCAGCAGGAGCTGTGCGAGCTGGTGAAC
CTGCGAGAGTTGTTCCTATATCGGAACAAGATCGACTACTTGCCGCCGGA
GGTGGGCGAGTGCACAGAACTGACGGTCCTAGATCTCCGAGCAAACGCCC
TAACGGCGTTGCCCCCCGAGCTTGCCCGCTGCACGGCGTTGGAGGTCCTA
CACGTGGGGGCAAACAAGATAGCGGCGTTTCAGCAGGAGCTGTGCGAGCT
GGTGAACCTGCGAGAGTTGTTCCTATATCGGAACAAGATCGACTACTTGC
CGCCGGAGGTGGGTTGCCTGTCCAGGCTCGTGAAACTTTCCGTGAGCGGG
AACAATATCAAGGTGGGTTGCCTGTCCAGGCTCGTGAAACTTTCCGTGAG
CGGGAACAATATCAAGGCAATTCCGGTTGAGATCGGCGCTTGCGTTTGTT
TGACGGAGCTGTACATCAACAACAACCAAAAGGCAATTCCGGTTGAGATC
GGCGCTTGCGTTTGTTTGACGGAGCTGTACATCAACAACAACCAAAAGTT
TTCGTCGATGCCGGCGTCGATGAGCGGCTTGAAGATGCTGAGGGAGCTAT
CCGCTCGACGTTTTCGTCGATGCCGGCGTCGATGAGCGGCTTGAAGATGC
TGAGGGAGCTATCCGCTCGACGGTGCAAGGCGCTCAAGTCGCTTCCGGCA
GAGATCGCGAATTGTGAGAGCCTTAGGGAGCTCGACGTGCGCTCGGACAA
GAAACAAACGTGCAAGATGACACCGGAATTCGCGGCCGCTCTCAAAGTGC
GCCGCTGCACGATAAGAGGCGGCGTCATCAAAAAGGGGAAAGGGGGAAAG
AAAGCGTAGGTGCAAGGCGCTCAAGTCGCTTCCGGCAGAGATCGCGAATT
GTGAGAGCCTTAGGGAGCTCGACGTGCGCTCGGACAAGAAACAAACGTGC
AAGATGACACCGGAATTCGCGGCCGCTCTCAAAGTGCGCCGCTGCACGAT
AAGAGGCGGCGTCATCAAAAAGGGGAAAGGGGGAAAGAAAGCGTAG
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