prot_S-dermatodea_contig12096.1304.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig12096.1304.1
Unique Name	prot_S-dermatodea_contig12096.1304.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	387

Homology

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 6.220e-117
Identity = 203/357 (56.86%), Postives = 212/357 (59.38%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQ 357
            MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQV                                                                                                                                        TVGSLEL+ANKDI+QIIECTED+NKYRSL KH+Q+H + GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFK GNF VLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG AVSFFG+KNSRN REL+KILTES+N VPPEL QMQ
Sbjct:  285 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQ 505

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 288 bits (738), Expect = 6.630e-91
Identity = 168/360 (46.67%), Postives = 190/360 (52.78%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 360
            MLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+ LARDFL +YYQV                                                                                                                                        TVGSLELSANKDI+Q+IE  ED+ KYR LVKH+QEHNN G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK Q ERD VL DFK G  ++LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF AKNS+  REL++IL +++  VP EL+ M M G
Sbjct:  182 MLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAMGG 405

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.180e-86
Identity = 163/357 (45.66%), Postives = 188/357 (52.66%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQ 357
            MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQV                                                                                                                                        TVGSLELSANKD+ QIIEC ED+ KYR L +H++E     K L+FVETKKGCDALTRSLR DGY ARCIHGDK Q+ERD+VL++F+     +LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF +KN++  REL++IL ++ + VP ELAQ Q
Sbjct:  269 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQFQ 489

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.890e-84
Identity = 161/356 (45.22%), Postives = 189/356 (53.09%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQM 356
            MLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEVQALARDFL +YYQV                                                                                                                                        TVGSL+LSANKDIRQ +E  ED++KY  L+++++EHN+ G+VL+FVETKKG D L RSLR DG+ A  IHGDKTQ+ERDY LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF +KN+R  R+L KIL+ES N VPP LA M
Sbjct:  220 MLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPALAGM 439

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 271 bits (692), Expect = 6.190e-83
Identity = 160/356 (44.94%), Postives = 186/356 (52.25%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQM 356
            MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQV                                                                                                                                        TVGSLEL AN DI Q+IE  EDY KY  L +  +      K LVFVETK+GCDALTRSLR DG+ ARCIHGDKTQ+ERD+VLK+F+  +  +LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFG+KN++  REL++I+ E+ +AVP  L QM
Sbjct:  264 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQM 482

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.080e-76
Identity = 148/360 (41.11%), Postives = 184/360 (51.11%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 360
            MLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ +ARDFL ++YQV                                                                                                                                        TVGSLEL+ANK I Q++E  +D +KYR  +  M+EH    +V+VFVETK+G D LTRS+RQ+GY A  IHGDKTQ+ERD  L+DF+ G  M+L+ATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA G ++S+F  KN+R  R+L+K+L ++   VP +L QM MSG
Sbjct:  250 MLDMGFEPQMRKIVSQIRPDRQTLMWSATWPKEVEGMARDFLTNFYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEVPRDLEQMAMSG 473

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.720e-75
Identity = 154/360 (42.78%), Postives = 178/360 (49.44%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 360
            MLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQV                                                                                                                                        TVGSL+L+ANKDI+Q +   ED +KY  L++ ++E+N  GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL ES N VP  L  M   G
Sbjct:  129 MLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAALRGMGGGG 352

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: D8LL45_ECTSI (Ethylene-responsive DEAD box RNA helicase, putative (RH30) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL45_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.050e-74
Identity = 124/174 (71.26%), Postives = 142/174 (81.61%), Query Frame = 0

Query:  182 LKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRN--CRELMKILTESDNAVPPEL 353
            ++V VGSLEL+ANKDI+QIIECTE++NKYRSL KH+Q+H   G +LVFVE              D YQARCI GDKT+E RDYVLKDFK+GNF VLVATDVAARGLD+K+IQMVINFDFPNNMED++HRI RCGRAGAKG AV+FFG+KNSRN  C EL+KILTES N VPP L
Sbjct:    5 VQVKVGSLELAANKDIKQIIECTEEFNKYRSLCKHLQQHGRNGNLLVFVE--------------DSYQARCIQGDKTREGRDYVLKDFKSGNFQVLVATDVAARGLDMKEIQMVINFDFPNNMEDFMHRIKRCGRAGAKGVAVNFFGSKNSRNNGC-ELIKILTESGNNVPPVL 163

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S3NF06_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF06_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.980e-74
Identity = 148/359 (41.23%), Postives = 179/359 (49.86%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMS 359
            MLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ LA DFL  YYQV                                                                                                                                        TVGSL+L+AN DI QII   ED  KY+ +V  + +     K+LVFVETK+G D LTRSL++D + ARCIHGDK+Q ERD+VL DF++G  M+L+ATDVAARGLD+KDIQ V+NFDFP+N+EDY+HRIGRCGRAG KG A+SFF AK+ +  R L+KIL ++   VPP+L  M  S
Sbjct:  293 MLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRTLANDFLKDYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANTDIEQIIHVVEDATKYKRMVDFLHDRPANDKMLVFVETKRGADQLTRSLQKDRFSARCIHGDKSQAERDWVLNDFRSGKCMLLIATDVAARGLDIKDIQTVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTAKSIKWSRRLIKILQDAKQQVPPDLISMSQS 515

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BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 247 bits (630), Expect = 7.030e-74
Identity = 154/360 (42.78%), Postives = 179/360 (49.72%), Query Frame = 0

Query:    1 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 360
            MLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQV                                                                                                                                        TVGSL+L+ANKDI+Q +   ED +KY  L++ ++E+N  GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K++R  REL KIL ES N VP  L  M   G
Sbjct:  259 MLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGMGGGG 482

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FGZ5_ECTSI	6.220e-117	56.86	DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re...	[more]
A0A6H5KBB2_9PHAE	6.630e-91	46.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2XX29_9STRA	1.180e-86	45.66	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835ZEN1_9STRA	2.890e-84	45.22	DEAD box helicase n=1 Tax=Tribonema minus TaxID=30...	[more]
A0A6S9KNI1_HETAK	6.190e-83	44.94	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S2BHU1_9STRA	1.080e-76	41.11	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A4D9CVW6_9STRA	2.720e-75	42.78	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
D8LL45_ECTSI	1.050e-74	71.26	Ethylene-responsive DEAD box RNA helicase, putativ...	[more]
A0A7S3NF06_9STRA	1.980e-74	41.23	Hypothetical protein n=3 Tax=Aureoumbra lagunensis...	[more]
W7U315_9STRA	7.030e-74	42.78	Dead-box atp-dependent rna helicase n=1 Tax=Nannoc...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 237..318 e-value: 1.0E-34 score: 131.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 209..318 e-value: 2.1E-33 score: 115.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 196..357 score: 23.928
None	No IPR available	GENE3D	3.40.50.300		coord: 185..359 e-value: 2.8E-59 score: 201.4
None	No IPR available	GENE3D	3.40.50.300		coord: 1..49 e-value: 3.1E-14 score: 54.6
None	No IPR available	PANTHER	PTHR24031:SF683		coord: 1..47
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 183..359
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 1..47
None	No IPR available	PANTHER	PTHR24031:SF683		coord: 183..359
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 1..48 score: 10.239
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..357

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12096	contig	S-dermatodea_contig12096:5139..6556 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12096.1304.1	mRNA_S-dermatodea_contig12096.1304.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig12096 5139..6577 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig12096.1304.1 ID=prot_S-dermatodea_contig12096.1304.1|Name=mRNA_S-dermatodea_contig12096.1304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=387bp
MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRY
KAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVAL
EILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLR
DVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQI
IECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQA
RCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDF
PNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVP
PELAQMQMSGGGGGGXXXXRRGAGGRGGGGGGGGGGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase