mRNA_S-dermatodea_contig12096.1304.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12096.1304.1
Unique NamemRNA_S-dermatodea_contig12096.1304.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 8.530e-122
Identity = 210/364 (57.69%), Postives = 219/364 (60.16%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQ 1092
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQV                                                                                                                                        TVGSLEL+ANKDI+QIIECTED+NKYRSL KH+Q+H + GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFK GNF VLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG AVSFFG+KNSRN REL+KILTES+N VPPEL QMQ
Sbjct:  278 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPELQQMQ 505          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 9.180e-96
Identity = 175/367 (47.68%), Postives = 197/367 (53.68%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 1101
            VLDEADRMLDMGFEPQIR IVSQIRPDRQTLMWSATWPKEV+ LARDFL +YYQV                                                                                                                                        TVGSLELSANKDI+Q+IE  ED+ KYR LVKH+QEHNN G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK Q ERD VL DFK G  ++LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF AKNS+  REL++IL +++  VP EL+ M M G
Sbjct:  175 VLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVEGLARDFLRNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSELSGMAMGG 405          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.750e-91
Identity = 170/364 (46.70%), Postives = 195/364 (53.57%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQ 1092
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQV                                                                                                                                        TVGSLELSANKD+ QIIEC ED+ KYR L +H++E     K L+FVETKKGCDALTRSLR DGY ARCIHGDK Q+ERD+VL++F+     +LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF +KN++  REL++IL ++ + VP ELAQ Q
Sbjct:  262 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQELAQFQ 489          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 285 bits (730), Expect = 4.180e-89
Identity = 168/363 (46.28%), Postives = 196/363 (53.99%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQM 1089
            VLDEADRMLDMGFEPQIRKIV QIRPDRQTLMWSATWPKEVQALARDFL +YYQV                                                                                                                                        TVGSL+LSANKDIRQ +E  ED++KY  L+++++EHN+ G+VL+FVETKKG D L RSLR DG+ A  IHGDKTQ+ERDY LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF +KN+R  R+L KIL+ES N VPP LA M
Sbjct:  213 VLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQALARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPALAGM 439          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 283 bits (725), Expect = 9.280e-88
Identity = 167/363 (46.01%), Postives = 193/363 (53.17%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQM 1089
            VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ LARDFL +YYQV                                                                                                                                        TVGSLEL AN DI Q+IE  EDY KY  L +  +      K LVFVETK+GCDALTRSLR DG+ ARCIHGDKTQ+ERD+VLK+F+  +  +LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFG+KN++  REL++I+ E+ +AVP  L QM
Sbjct:  257 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQGLARDFLTNYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSLQQM 482          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 267 bits (682), Expect = 1.650e-81
Identity = 155/367 (42.23%), Postives = 191/367 (52.04%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 1101
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ +ARDFL ++YQV                                                                                                                                        TVGSLEL+ANK I Q++E  +D +KYR  +  M+EH    +V+VFVETK+G D LTRS+RQ+GY A  IHGDKTQ+ERD  L+DF+ G  M+L+ATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA G ++S+F  KN+R  R+L+K+L ++   VP +L QM MSG
Sbjct:  243 VLDEADRMLDMGFEPQMRKIVSQIRPDRQTLMWSATWPKEVEGMARDFLTNFYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEVPRDLEQMAMSG 473          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 259 bits (662), Expect = 3.830e-80
Identity = 161/367 (43.87%), Postives = 185/367 (50.41%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 1101
            VLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQV                                                                                                                                        TVGSL+L+ANKDI+Q +   ED +KY  L++ ++E+N  GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL ES N VP  L  M   G
Sbjct:  122 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAALRGMGGGG 352          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A7S3NF06_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF06_9STRA)

HSP 1 Score: 262 bits (670), Expect = 3.170e-79
Identity = 155/366 (42.35%), Postives = 186/366 (50.82%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMS 1098
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQTLMWSATWPKEV+ LA DFL  YYQV                                                                                                                                        TVGSL+L+AN DI QII   ED  KY+ +V  + +     K+LVFVETK+G D LTRSL++D + ARCIHGDK+Q ERD+VL DF++G  M+L+ATDVAARGLD+KDIQ V+NFDFP+N+EDY+HRIGRCGRAG KG A+SFF AK+ +  R L+KIL ++   VPP+L  M  S
Sbjct:  286 VLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVRTLANDFLKDYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANTDIEQIIHVVEDATKYKRMVDFLHDRPANDKMLVFVETKRGADQLTRSLQKDRFSARCIHGDKSQAERDWVLNDFRSGKCMLLIATDVAARGLDIKDIQTVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTAKSIKWSRRLIKILQDAKQQVPPDLISMSQS 515          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.090e-78
Identity = 161/367 (43.87%), Postives = 186/367 (50.68%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVPPELAQMQMSG 1101
            VLDEADRMLDMGFEPQ+R IVSQIRPDRQTLMWSATWPKEVQ+LARDFL   YQV                                                                                                                                        TVGSL+L+ANKDI+Q +   ED +KY  L++ ++E+N  GKVLVFVETK+GCD L RSL+ DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K++R  REL KIL ES N VP  L  M   G
Sbjct:  252 VLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSLARDFLKDPYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAALRGMGGGG 482          
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Match: A0A1E7FX17_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX17_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.770e-78
Identity = 157/362 (43.37%), Postives = 185/362 (51.10%), Query Frame = 1
Query:    1 VLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRYKAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVALEILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLRDVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQIIECTEDYNKYRSLVKHMQEH-NNTGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFF-GAKNSRNCRELMKILTESDNAVPPEL 1080
            VLDEADRMLDMGFEPQ+RKIVSQIRPDRQ LMWSATWPKE+Q LARD+L  YYQV                                                                                                                                        TVGS +L+ NKD+ QIIE  +D +KYRSL+++++E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDK+Q+ERD+ L +FK     +L ATDVAARGLDV DI+MV+NFD PNNMEDY+HRIGR GRAG KG AVSFF G KN R  +ELM IL  +D  +PPEL
Sbjct:  187 VLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWPKEIQGLARDYLGEYYQV----------------------------------------------------------------------------------------------------------------------------------------TVGSQDLTGNKDVTQIIEVCQDPDKYRSLLRYLRENLTPKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQQERDWALGEFKNCQSTLLCATDVAARGLDVDDIKMVVNFDMPNNMEDYVHRIGRTGRAGKKGTAVSFFVGEKNGRMAKELMDILKRTDQNIPPEL 412          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12096.1304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI8.530e-12257.69DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A6H5KBB2_9PHAE9.180e-9647.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA1.750e-9146.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZEN1_9STRA4.180e-8946.28DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9KNI1_HETAK9.280e-8846.01Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2BHU1_9STRA1.650e-8142.23Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9CVW6_9STRA3.830e-8043.87Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3NF06_9STRA3.170e-7942.35Hypothetical protein n=3 Tax=Aureoumbra lagunensis... [more]
W7U315_9STRA1.090e-7843.87Dead-box atp-dependent rna helicase n=1 Tax=Nannoc... [more]
A0A1E7FX17_9STRA2.770e-7843.37DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12096contigS-dermatodea_contig12096:5139..6577 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score363.2
Seed ortholog evalue1.5e-97
Seed eggNOG ortholog2880.D7FGZ5
Preferred nameDBP2
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionethylene-responsive DEAD box RNA helicase, putative (RH30)
Ec32 orthologEc-26_003500.1
Exons4
Model size1182
Cds size1161
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12096.1304.1prot_S-dermatodea_contig12096.1304.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12096 5139..6556 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924230.5638192-CDS-S-dermatodea_contig12096:5138..52061622924230.5638192-CDS-S-dermatodea_contig12096:5138..5206Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5139..5206 -
1694079110.610176-CDS-S-dermatodea_contig12096:5138..52061694079110.610176-CDS-S-dermatodea_contig12096:5138..5206Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5139..5206 -
1622924230.5718951-CDS-S-dermatodea_contig12096:5327..59201622924230.5718951-CDS-S-dermatodea_contig12096:5327..5920Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5328..5920 -
1694079110.6211793-CDS-S-dermatodea_contig12096:5327..59201694079110.6211793-CDS-S-dermatodea_contig12096:5327..5920Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5328..5920 -
1622924230.5793312-CDS-S-dermatodea_contig12096:5938..62621622924230.5793312-CDS-S-dermatodea_contig12096:5938..6262Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5939..6262 -
1694079110.6295507-CDS-S-dermatodea_contig12096:5938..62621694079110.6295507-CDS-S-dermatodea_contig12096:5938..6262Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 5939..6262 -
1622924230.589157-CDS-S-dermatodea_contig12096:6380..65561622924230.589157-CDS-S-dermatodea_contig12096:6380..6556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 6381..6556 -
1694079110.638494-CDS-S-dermatodea_contig12096:6380..65561694079110.638494-CDS-S-dermatodea_contig12096:6380..6556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12096 6381..6556 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924230.6059566-UTR-S-dermatodea_contig12096:6556..65771622924230.6059566-UTR-S-dermatodea_contig12096:6556..6577Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12096 6557..6577 -
1694079110.6481056-UTR-S-dermatodea_contig12096:6556..65771694079110.6481056-UTR-S-dermatodea_contig12096:6556..6577Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12096 6557..6577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12096.1304.1

>prot_S-dermatodea_contig12096.1304.1 ID=prot_S-dermatodea_contig12096.1304.1|Name=mRNA_S-dermatodea_contig12096.1304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=387bp
MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQALARDFLHHYYQVRY
KAWVASQGFTRSCAHLLRCTGSALGRRRDRLHAVSMRTERKCRWTPGVAL
EILWGLPVYFNVSFCFAEVEFLKRNGLFQGQENSLRCSRQTALDRVSSLR
DVHVMRVSTCSPVSLLANPHKFPSPSSRPPLLKVTVGSLELSANKDIRQI
IECTEDYNKYRSLVKHMQEHNNTGKVLVFVETKKGCDALTRSLRQDGYQA
RCIHGDKTQEERDYVLKDFKAGNFMVLVATDVAARGLDVKDIQMVINFDF
PNNMEDYIHRIGRCGRAGAKGRAVSFFGAKNSRNCRELMKILTESDNAVP
PELAQMQMSGGGGGGXXXXRRGAGGRGGGGGGGGGGG
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mRNA from alignment at S-dermatodea_contig12096:5139..6577-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12096.1304.1 ID=mRNA_S-dermatodea_contig12096.1304.1|Name=mRNA_S-dermatodea_contig12096.1304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1439bp|location=Sequence derived from alignment at S-dermatodea_contig12096:5139..6577- (Saccorhiza dermatodea SderLu1190fm monoicous)
GTTCTGGACGAGGCCGACCGCATGCTGGACATGGGGTTCGAGCCCCAGAT CCGCAAGATCGTTAGCCAGATCCGGCCCGACAGGCAGACTCTAATGTGGA GCGCCACGTGGCCCAAGGAGGTGCAGGCGCTTGCCCGCGACTTCCTTCAC CACTACTACCAGGTACGCTATAAAGCTTGGGTGGCTTCTCAAGGTTTGTT GGTTTCCTTTGTACTATTAATAGCTGCTTCCACCTCGTGTGGGGCGCCGA GGAAATACGGAAACCGTTCGGCGGCGATTCTGTGCGAGAGGGGTTTAGAG TTTGCGTAGGTTTAGCACCCGTTCTTGTGCGCACCTGTTACGGTGCACAG GTTCTGCATTAGGCCGTCGGCGTGATCGCCTGCACGCCGTCAGTATGCGC ACGGAGAGGAAATGTAGGTGGACGCCAGGCGTCGCCCTCGAGATTTTATG GGGACTGCCAGTGTACTTCAATGTATCGTTTTGTTTTGCTGAGGTCGAAT TCTTAAAACGCAATGGATTGTTTCAAGGGCAGGAGAACAGTCTCAGGTGC TCCAGGCAGACGGCGCTTGATAGGGTAAGTTCTCTTCGCGACGTACATGT GATGCGTGTTTCTACGTGCTCTCCCGTCTCCCTCCTTGCGTAACATGTGT GTCCCAGCAATCCTCACAAATTCCCTTCCCCGTCGTCGCGCCCCCCGCTG CTGAAGGTGACGGTGGGATCCCTCGAGCTGTCGGCGAACAAGGACATCAG GCAAATCATCGAGTGCACCGAGGACTACAACAAGTACCGCAGCCTTGTGA AGCACATGCAGGAGCACAACAACACGGGCAAGGTTCTTGTGTTCGTCGAG ACGAAGAAGGGGTGCGACGCGCTTACGCGGTCACTTCGGCAGGACGGCTA CCAAGCGCGTTGCATCCACGGCGACAAGACCCAGGAGGAGCGCGACTACG TCCTCAAAGACTTCAAGGCCGGCAACTTCATGGTTCTCGTAGCGACGGAC GTGGCCGCGCGCGGGCTCGACGTGAAGGACATCCAGATGGTGATCAACTT CGACTTCCCGAACAACATGGAGGACTACATCCACCGCATCGGGCGGTGTG GCCGTGCCGGCGCCAAGGGCCGCGCCGTCAGCTTCTTCGGTGCAAAGAAC TCGCGAAACTGCCGCGAGCTGATGAAGATCCTTACCGAGTCCGACAACGC TGTCCCGCCGGAGTTGGCACAGATGCAGATGTCGGGCGGAGGCGGGGGTG GTAGCAGCCGTTATCGCCGTTAGGCTGGCTCTGTGCAGCCGGTGGGGGGG GGGGGGGGGGGGGGAGTCGCCCAGTCTTTACAGTGTGGGGGCCGGGGGTT GGGGGTGTTGGTAGGGGGTAGGTGNNNNNNNNNNGCGGCGCGGGGCGGGG GGGCGGGGCGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig12096:5139..6577-

>mRNA_S-dermatodea_contig12096.1304.1 ID=mRNA_S-dermatodea_contig12096.1304.1|Name=mRNA_S-dermatodea_contig12096.1304.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2322bp|location=Sequence derived from alignment at S-dermatodea_contig12096:5139..6577- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTGGACATGGGGTTCGAGCCCCAGATCCGCAAGATCGTTAGCCAGAT
CCGGCCCGACAGGCAGACTCTAATGTGGAGCGCCACGTGGCCCAAGGAGG
TGCAGGCGCTTGCCCGCGACTTCCTTCACCACTACTACCAGGTACGCTAT
AAAGCTTGGGTGGCTTCTCAAGGTTTATGCTGGACATGGGGTTCGAGCCC
CAGATCCGCAAGATCGTTAGCCAGATCCGGCCCGACAGGCAGACTCTAAT
GTGGAGCGCCACGTGGCCCAAGGAGGTGCAGGCGCTTGCCCGCGACTTCC
TTCACCACTACTACCAGGTACGCTATAAAGCTTGGGTGGCTTCTCAAGGT
TTCACCCGTTCTTGTGCGCACCTGTTACGGTGCACAGGTTCTGCATTAGG
CCGTCGGCGTGATCGCCTGCACGCCGTCAGTATGCGCACGGAGAGGAAAT
GTAGGTGGACGCCAGGCGTCGCCCTCGAGATTTTATGGGGACTGCCAGTG
TACTTCAATGTATCGTTTTGTTTTGCTGAGGTCGAATTCTTAAAACGCAA
TGGATTGTTTCAAGGGCAGGAGAACAGTCTCAGGTGCTCCAGGCAGACGG
CGCTTGATAGGGTAAGTTCTCTTCGCGACGTACATGTGATGCGTGTTTCT
ACGTGCTCTCCCGTCTCCCTCCTTGCCACCCGTTCTTGTGCGCACCTGTT
ACGGTGCACAGGTTCTGCATTAGGCCGTCGGCGTGATCGCCTGCACGCCG
TCAGTATGCGCACGGAGAGGAAATGTAGGTGGACGCCAGGCGTCGCCCTC
GAGATTTTATGGGGACTGCCAGTGTACTTCAATGTATCGTTTTGTTTTGC
TGAGGTCGAATTCTTAAAACGCAATGGATTGTTTCAAGGGCAGGAGAACA
GTCTCAGGTGCTCCAGGCAGACGGCGCTTGATAGGGTAAGTTCTCTTCGC
GACGTACATGTGATGCGTGTTTCTACGTGCTCTCCCGTCTCCCTCCTTGC
CAATCCTCACAAATTCCCTTCCCCGTCGTCGCGCCCCCCGCTGCTGAAGG
TGACGGTGGGATCCCTCGAGCTGTCGGCGAACAAGGACATCAGGCAAATC
ATCGAGTGCACCGAGGACTACAACAAGTACCGCAGCCTTGTGAAGCACAT
GCAGGAGCACAACAACACGGGCAAGGTTCTTGTGTTCGTCGAGACGAAGA
AGGGGTGCGACGCGCTTACGCGGTCACTTCGGCAGGACGGCTACCAAGCG
CGTTGCATCCACGGCGACAAGACCCAGGAGGAGCGCGACTACGTCCTCAA
AGACTTCAAGGCCGGCAACTTCATGGTTCTCGTAGCGACGGACGTGGCCG
CGCGCGGGCTCGACGTGAAGGACATCCAGATGGTGATCAACTTCGACTTC
CCGAACAACATGGAGGACTACATCCACCGCATCGGGCGGTGTGGCCGTGC
CGGCGCCAAGGGCCGCGCCGTCAGCTTCTTCGGTGCAAAGAACTCGCGAA
ACTGCCGCGAGCTGATGAAGATCCTTACCGAGTCCGACAACGCTGTCCCG
CCGGAGTTGGCACAGATGCAGATGTCGGGCGGAGGCGGGGGTGCAATCCT
CACAAATTCCCTTCCCCGTCGTCGCGCCCCCCGCTGCTGAAGGTGACGGT
GGGATCCCTCGAGCTGTCGGCGAACAAGGACATCAGGCAAATCATCGAGT
GCACCGAGGACTACAACAAGTACCGCAGCCTTGTGAAGCACATGCAGGAG
CACAACAACACGGGCAAGGTTCTTGTGTTCGTCGAGACGAAGAAGGGGTG
CGACGCGCTTACGCGGTCACTTCGGCAGGACGGCTACCAAGCGCGTTGCA
TCCACGGCGACAAGACCCAGGAGGAGCGCGACTACGTCCTCAAAGACTTC
AAGGCCGGCAACTTCATGGTTCTCGTAGCGACGGACGTGGCCGCGCGCGG
GCTCGACGTGAAGGACATCCAGATGGTGATCAACTTCGACTTCCCGAACA
ACATGGAGGACTACATCCACCGCATCGGGCGGTGTGGCCGTGCCGGCGCC
AAGGGCCGCGCCGTCAGCTTCTTCGGTGCAAAGAACTCGCGAAACTGCCG
CGAGCTGATGAAGATCCTTACCGAGTCCGACAACGCTGTCCCGCCGGAGT
TGGCACAGATGCAGATGTCGGGCGGAGGCGGGGGTGGTGNNNNNNNNNNG
CGGCGCGGGGCGGGGGGGCGGGGCGGGGGGGGGGGTGGGGGGGGGGGGGG
GGGGGTGNNNNNNNNNNGCGGCGCGGGGCGGGGGGGCGGGGCGGGGGGGG
GGGTGGGGGGGGGGGGGGGGGG
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