prot_S-dermatodea_contig12092.1301.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig12092.1301.1
Unique Name	prot_S-dermatodea_contig12092.1301.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	232

Homology

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 4.280e-110
Identity = 179/243 (73.66%), Postives = 203/243 (83.54%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGL-LPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVE-------GRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGL----EDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVDLV 231
            +SR+LSLDDLTQEG+VGLLQAV KFDPTKGTRFSSYAVFRIKAS+LRAIA+KDRLVRVPVHAQD+AMRILA SH++QLE+G  +PTDAQLA+AL MPE SV LYR+S LP N+ +LD+  L  S  G         GR+GGE WPW+AS+LAQA VVRRDM R MQACLSPTEERALRLRFGL    ++GA G   GALTFKEIGRTME+SAEGIR+ VFR+IAKLQ SDEANGLLLAY DL+
Sbjct:  197 VSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGGGSRGGRVGGEQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.570e-109
Identity = 176/247 (71.26%), Postives = 204/247 (82.59%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGL-LPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISG-----------VEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGL----EDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVDLV 231
            +SR+LSLDDLTQEG+VGLL+AV KFD TKGTRFSSYAVFRIKAS+LRAIA+KDRLVRVPVHAQD+AMRILA SH++QLE+G  +PTDAQLA+AL MPE SV LYR+S LP N+ +LD+P L  S  G           + GR+GGE WPW+AS+LAQA VVRRDM R MQACLSPTEERALRLRFGL    ++GA  +  GALTFKEIGRTME+SAEGIR+ VFR+IAKLQ SDEANGLLL+Y DL+
Sbjct:  135 VSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.850e-46
Identity = 102/233 (43.78%), Postives = 147/233 (63.09%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYR----RSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVD 229
            +++SL+LDDL QEG++GLL A +KFDP KG RF +YA FR+KAS+LRAIANKDR +R+PVH QD A ++ + +  +Q+  G  PTDA++A  L M    V  +R    + A+  N  +  D      +     R         A+  A++++V  D++RV++  L+P E  AL+LRFGL+    G+ AG LTFKE+G +M+ SAEGIR+ V RA+ KL+E  EA  LL  Y +
Sbjct:  129 ITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVTLGRPPTDAEIAATLDMLPSEVTAHREMMDKEAVTVNAVSDRD------VMAFAAR---------ATPQARSEMV-EDLKRVLELYLAPKEIEALQLRFGLD----GQAAGPLTFKEVGGSMQTSAEGIRRIVSRALDKLREG-EAWRLLSDYAE 340

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.000e-33
Identity = 84/227 (37.00%), Postives = 129/227 (56.83%), Query Frame = 0

Query:    3 RSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGG-------------EHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQE 216
            R L+L DL QEGS GL++A  +FDP KG +FS+YA + IK SI+RAIA++ R +R+PVH  D    I   +  + LE G  PTD +L+L L +P + +  YR +A   +V +++  +L  +  G    +GG             E  P D +   Q  +++ +M +++   LSP E+  +RLRFGL+DG       A T +EIG+   V+ E +RQ   RA+ KL++
Sbjct:  152 RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAA--RSVLSMEQ-SLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRT---QQSMLKENMSQLL-GTLSPREQEVVRLRFGLDDGR------ARTLEEIGQVFCVTRERVRQIESRALQKLRQ 365

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A3M0YZM3_9CHLR (RNA polymerase sigma factor (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M0YZM3_9CHLR)

HSP 1 Score: 125 bits (315), Expect = 1.080e-31
Identity = 88/227 (38.77%), Postives = 126/227 (55.51%), Query Frame = 0

Query:    3 RSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVD 229
            R L L DL QEGS+GLL+A+ KFD TKG +FS+YA + IK ++ RA+A++ RLVR+PVH  ++  RI A    +    G  PTDA+LA  L M EE +R  RR+A   +  +L  P   E+ S +   I   H   DA   A + ++R+ +   +   LS  E R L LR+GL DG         T +E+G+   V+ E +RQ   +A+ KL+       LL  Y+D
Sbjct:   44 RGLPLLDLIQEGSLGLLRAIEKFDHTKGYKFSTYATWWIKQALSRALADQSRLVRLPVHLGETLNRIQAARRQLTQSLGREPTDAELANHLGMSEEKLRELRRTA--QDPVSLATPVGEEADSTLADFIPDPH-ALDADDAAASGMLRQQIAAALDQ-LSERERRVLELRYGLADGQ------PRTLEEVGKAFGVTRERVRQIEVKALRKLRHP-RLGKLLKDYLD 259

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A7W1A713_9CHLR (RNA polymerase sigma factor SigA n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1A713_9CHLR)

HSP 1 Score: 126 bits (317), Expect = 8.690e-31
Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQ 215
            + R LSL DL QEG+VGL++AV KFD  KG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  R++ TS  +  E G  P+D +LA AL +  E VR  R+++L     +L+ P  +E  S +   +  E    P DA   A  Q++R  + +V+   L+  E R L+LRFGLEDG +       T +E+G+   V+ E IRQ   +A+ KL+
Sbjct:  184 IGRGLSLLDLIQEGNVGLIRAVEKFDYKKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRMMRTSRRLTQEHGREPSDEELAQALELSVEKVRSIRKTSLEP--VSLETPVGQEDDSQLGDFLPDEKLEAPSDA---ASHQMLREQVAQVLDQ-LTERERRVLKLRFGLEDGTQR------TLEEVGKEFGVTRERIRQIEVKALRKLR 388

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: X1NP93_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1NP93_9ZZZZ)

HSP 1 Score: 123 bits (308), Expect = 9.470e-31
Identity = 82/226 (36.28%), Postives = 130/226 (57.52%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVR-LYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGL 223
            + R +SL DL QEG++GL++AV KFD  KG +FS+YA + I+ ++ RAIA++ R +R+PVH  ++  R+L TS  +  E G  PT  ++A  + +  E VR + + S LP +   L+ P   E  S +   I   +   P DA   A  Q+++  ++ V+   L+P E+R L+LRFGLEDG       + T +E+G+   V+ E IRQ   +A+ KL+    +  L
Sbjct:   35 IGRGMSLLDLIQEGNIGLMRAVEKFDYRKGYKFSTYATWWIRQALTRAIADQARTIRIPVHMVETINRLLKTSRRLAQEYGREPTSTEIAKEMEISPEKVREIVKVSQLPIS---LESPIGEEEDSPLGNSIEDRNALPPVDA---ASKQLLKEQIEDVLYT-LTPREQRVLQLRFGLEDGR------SRTLEEVGKEFSVTRERIRQIEAKALRKLRHPSRSRKL 247

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: UPI00194EADD7 (RNA polymerase sigma factor RpoD n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00194EADD7)

HSP 1 Score: 125 bits (315), Expect = 1.170e-30
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSA-LPANVQNLDDPTLRESISGVEGRI--GGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYV 228
            M+R LS  DL QEGS+GL++A  KFD +KG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  RI  T+  +  E G  PT+ ++A  + M  E +R   +SA LP +   L+ P  +E  S +   I   GE      SK     ++R D++ V+   LSP E   LRLR+GL+DG         T +EIG+   V+ E IRQ   +A+ KL+  +  N +L  Y+
Sbjct:  162 MNRGLSFQDLIQEGSLGLIRAAEKFDHSKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPIS---LETPIGKEEDSRLGDFIEADGETPEDQVSK----SLLREDLENVLDT-LSPRERDVLRLRYGLDDGRMK------TLEEIGQIFNVTRERIRQIEAKALRKLRHPNR-NSILKEYI 377

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A9B4B0_HERA2 (RNA polymerase sigma factor SigA n=2 Tax=Herpetosiphon TaxID=64 RepID=A9B4B0_HERA2)

HSP 1 Score: 126 bits (316), Expect = 1.190e-30
Identity = 83/217 (38.25%), Postives = 131/217 (60.37%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQ 215
            + R LSL DL QEG+VGL++AV KF+ TKG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  R++ T+  +  E G  P+D +LA AL +  E VR  R++++     +L+ P  +E  S +   +  E    P DA   A  Q++R  + +V+   L+  E+R L+LRFGLEDG +       T +E+G+   V+ E IRQ   +A+ KL+
Sbjct:  183 IGRGLSLLDLIQEGNVGLIRAVEKFNYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRMMRTARRLTQENGREPSDEELAQALDLTVEKVRSIRKTSMEP--VSLETPVGQEEDSQLGDFLPDEKLEAPSDA---ASHQMLREQVAQVLDQ-LTEREKRVLKLRFGLEDGTQR------TLEEVGKEFGVTRERIRQIEVKALRKLR 387

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BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A316PIQ9_9FIRM (RNA polymerase sigma factor SigA n=3 Tax=Clostridia TaxID=186801 RepID=A0A316PIQ9_9FIRM)

HSP 1 Score: 124 bits (312), Expect = 2.210e-30
Identity = 82/223 (36.77%), Postives = 125/223 (56.05%), Query Frame = 0

Query:    1 MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGL 223
            + R +   DL QEG++GL++AV KFD TKG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  ++   +  +  E G  PT+ Q+A  L MP E VR   R A      +L+ P   E  S +   I  E  P   S +A   +++  +  V+ A L+P EE+ LRLRFGLEDG       + T +E+G+   V+ E IRQ   +A+ KL+    +  L
Sbjct:  140 VGRGMQFLDLIQEGNLGLIKAVEKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKVKKVNSQLLHENGHEPTNEQIAEKLEMPVEKVREIMRVA--QEPVSLETPIGEEEDSHLGDFIPDEDAP-APSDVASHTMLKEQLAEVL-ATLTPREEKVLRLRFGLEDGR------SRTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKL 352

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JMH8_9PHAE	4.280e-110	73.66	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPW8_ECTSI	1.570e-109	71.26	RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep...	[more]
A0A835ZDU2_9STRA	3.850e-46	43.78	RNA_pol_sigma70 domain-containing protein n=1 Tax=...	[more]
A0A835ZES3_9STRA	1.000e-33	37.00	RNA polymerase n=1 Tax=Tribonema minus TaxID=30337...	[more]
A0A3M0YZM3_9CHLR	1.080e-31	38.77	RNA polymerase sigma factor (Fragment) n=1 Tax=Chl...	[more]
A0A7W1A713_9CHLR	8.690e-31	39.17	RNA polymerase sigma factor SigA n=1 Tax=Herpetosi...	[more]
X1NP93_9ZZZZ	9.470e-31	36.28	Uncharacterized protein (Fragment) n=1 Tax=marine ...	[more]
UPI00194EADD7	1.170e-30	37.66	RNA polymerase sigma factor RpoD n=1 Tax=Spirulina...	[more]
A9B4B0_HERA2	1.190e-30	38.25	RNA polymerase sigma factor SigA n=2 Tax=Herpetosi...	[more]
A0A316PIQ9_9FIRM	2.210e-30	36.77	RNA polymerase sigma factor SigA n=3 Tax=Clostridi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 203..214 score: 41.77 coord: 33..41 score: 53.26 coord: 188..203 score: 34.31 coord: 9..22 score: 59.4
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 144..229 e-value: 1.7E-12 score: 48.9
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 56..106 e-value: 4.6E-7 score: 31.8
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 2..54 e-value: 5.4E-12 score: 45.3
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 160..216 e-value: 2.1E-8 score: 33.5
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAM	TIGR02937	TIGR02937	coord: 4..216 e-value: 5.0E-22 score: 76.3
None	No IPR available	GENE3D	1.10.601.10		coord: 1..55 e-value: 6.3E-20 score: 74.0
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 3..222
None	No IPR available	PANTHER	PTHR30603:SF45	RNA POLYMERASE SIGMA FACTOR SIGB	coord: 3..222
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 140..218
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 53..104
IPR013325	RNA polymerase sigma factor, region 2	SUPERFAMILY	88946	Sigma2 domain of RNA polymerase sigma factors	coord: 2..54

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig12092	contig	S-dermatodea_contig12092:252..947 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig12092.1301.1	mRNA_S-dermatodea_contig12092.1301.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig12092 240..947 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig12092.1301.1 ID=prot_S-dermatodea_contig12092.1301.1|Name=mRNA_S-dermatodea_contig12092.1301.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=232bp
MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIA
NKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESV
RLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVR
RDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSA
EGIRQTVFRAIAKLQESDEANGLLLAYVDLV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000943	RNA_pol_sigma70
IPR036388	WH-like_DNA-bd_sf
IPR007627	RNA_pol_sigma70_r2
IPR007630	RNA_pol_sigma70_r4
IPR014284	RNA_pol_sigma-70_dom
IPR013324	RNA_pol_sigma_r3/r4-like
IPR013325	RNA_pol_sigma_r2