mRNA_S-dermatodea_contig12092.1301.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12092.1301.1
Unique NamemRNA_S-dermatodea_contig12092.1301.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A6H5JMH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH8_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 4.710e-113
Identity = 182/247 (73.68%), Postives = 206/247 (83.40%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGL-LPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVE-------GRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGL----EDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVDLV 705
            RYK +SR+LSLDDLTQEG+VGLLQAV KFDPTKGTRFSSYAVFRIKAS+LRAIA+KDRLVRVPVHAQD+AMRILA SH++QLE+G  +PTDAQLA+AL MPE SV LYR+S LP N+ +LD+  L  S  G         GR+GGE WPW+AS+LAQA VVRRDM R MQACLSPTEERALRLRFGL    ++GA G   GALTFKEIGRTME+SAEGIR+ VFR+IAKLQ SDEANGLLLAY DL+
Sbjct:  193 RYKQVSRNLSLDDLTQEGNVGLLQAVEKFDPTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNSALSGSPQGRAAGGGSRGGRVGGEQWPWEASQLAQAYVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAAGGGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLAYADLI 439          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: D7FPW8_ECTSI (RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW8_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.700e-112
Identity = 179/251 (71.31%), Postives = 207/251 (82.47%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGL-LPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISG-----------VEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGL----EDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVDLV 705
            RYK +SR+LSLDDLTQEG+VGLL+AV KFD TKGTRFSSYAVFRIKAS+LRAIA+KDRLVRVPVHAQD+AMRILA SH++QLE+G  +PTDAQLA+AL MPE SV LYR+S LP N+ +LD+P L  S  G           + GR+GGE WPW+AS+LAQA VVRRDM R MQACLSPTEERALRLRFGL    ++GA  +  GALTFKEIGRTME+SAEGIR+ VFR+IAKLQ SDEANGLLL+Y DL+
Sbjct:  131 RYKQVSRNLSLDDLTQEGNVGLLEAVEKFDSTKGTRFSSYAVFRIKASVLRAIADKDRLVRVPVHAQDAAMRILAASHALQLESGGDVPTDAQLAVALGMPEASVALYRKSLLPQNIADLDNPALPSSPQGRGGSGAAGGGSLGGRVGGEQWPWEASQLAQAHVVRRDMMRAMQACLSPTEERALRLRFGLGGAEKEGAVADGGGALTFKEIGRTMELSAEGIRKMVFRSIAKLQASDEANGLLLSYADLI 381          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A835ZDU2_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDU2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.830e-47
Identity = 103/237 (43.46%), Postives = 149/237 (62.87%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYR----RSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVD 699
            +Y  +++SL+LDDL QEG++GLL A +KFDP KG RF +YA FR+KAS+LRAIANKDR +R+PVH QD A ++ + +  +Q+  G  PTDA++A  L M    V  +R    + A+  N  +  D      +     R         A+  A++++V  D++RV++  L+P E  AL+LRFGL+    G+ AG LTFKE+G +M+ SAEGIR+ V RA+ KL+E  EA  LL  Y +
Sbjct:  125 KYAFITKSLTLDDLIQEGNLGLLSAADKFDPDKGARFGTYAAFRVKASVLRAIANKDRQIRIPVHIQDVAGKVRSATQRLQVTLGRPPTDAEIAATLDMLPSEVTAHREMMDKEAVTVNAVSDRD------VMAFAAR---------ATPQARSEMV-EDLKRVLELYLAPKEIEALQLRFGLD----GQAAGPLTFKEVGGSMQTSAEGIRRIVSRALDKLREG-EAWRLLSDYAE 340          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A835ZES3_9STRA (RNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.770e-35
Identity = 87/233 (37.34%), Postives = 133/233 (57.08%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGG-------------EHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQE 660
            RYK+  R L+L DL QEGS GL++A  +FDP KG +FS+YA + IK SI+RAIA++ R +R+PVH  D    I   +  + LE G  PTD +L+L L +P + +  YR +A   +V +++  +L  +  G    +GG             E  P D +   Q  +++ +M +++   LSP E+  +RLRFGL+DG       A T +EIG+   V+ E +RQ   RA+ KL++
Sbjct:  148 RYKH--RGLALSDLVQEGSFGLMKAAERFDPDKGFKFSTYATWWIKQSIMRAIADQSRTIRLPVHVHDLLNSIKRATRELSLELGRTPTDEELSLRLQVPTQKIEFYREAA--RSVLSMEQ-SLNNARKGSAASLGGKSDMTLEDSLRDPEPLPEDRT---QQSMLKENMSQLL-GTLSPREQEVVRLRFGLDDGR------ARTLEEIGQVFCVTRERVRQIESRALQKLRQ 365          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A3M0YZM3_9CHLR (RNA polymerase sigma factor (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M0YZM3_9CHLR)

HSP 1 Score: 127 bits (320), Expect = 2.210e-32
Identity = 90/233 (38.63%), Postives = 130/233 (55.79%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVD 699
            RY++  R L L DL QEGS+GLL+A+ KFD TKG +FS+YA + IK ++ RA+A++ RLVR+PVH  ++  RI A    +    G  PTDA+LA  L M EE +R  RR+A   +  +L  P   E+ S +   I   H   DA   A + ++R+ +   +   LS  E R L LR+GL DG         T +E+G+   V+ E +RQ   +A+ KL+       LL  Y+D
Sbjct:   40 RYRD--RGLPLLDLIQEGSLGLLRAIEKFDHTKGYKFSTYATWWIKQALSRALADQSRLVRLPVHLGETLNRIQAARRQLTQSLGREPTDAELANHLGMSEEKLRELRRTA--QDPVSLATPVGEEADSTLADFIPDPH-ALDADDAAASGMLRQQIAAALDQ-LSERERRVLELRYGLADGQ------PRTLEEVGKAFGVTRERVRQIEVKALRKLRHP-RLGKLLKDYLD 259          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: X1NP93_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1NP93_9ZZZZ)

HSP 1 Score: 126 bits (316), Expect = 6.960e-32
Identity = 83/228 (36.40%), Postives = 132/228 (57.89%), Query Frame = 1
Query:    7 KNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVR-LYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGL 681
            K++ R +SL DL QEG++GL++AV KFD  KG +FS+YA + I+ ++ RAIA++ R +R+PVH  ++  R+L TS  +  E G  PT  ++A  + +  E VR + + S LP +   L+ P   E  S +   I   +   P DA   A  Q+++  ++ V+   L+P E+R L+LRFGLEDG       + T +E+G+   V+ E IRQ   +A+ KL+    +  L
Sbjct:   33 KHIGRGMSLLDLIQEGNIGLMRAVEKFDYRKGYKFSTYATWWIRQALTRAIADQARTIRIPVHMVETINRLLKTSRRLAQEYGREPTSTEIAKEMEISPEKVREIVKVSQLPIS---LESPIGEEEDSPLGNSIEDRNALPPVDA---ASKQLLKEQIEDVLYT-LTPREQRVLQLRFGLEDGR------SRTLEEVGKEFSVTRERIRQIEAKALRKLRHPSRSRKL 247          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A7W1A713_9CHLR (RNA polymerase sigma factor SigA n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1A713_9CHLR)

HSP 1 Score: 128 bits (322), Expect = 1.860e-31
Identity = 86/219 (39.27%), Postives = 130/219 (59.36%), Query Frame = 1
Query:    7 KNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQ 657
            K + R LSL DL QEG+VGL++AV KFD  KG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  R++ TS  +  E G  P+D +LA AL +  E VR  R+++L     +L+ P  +E  S +   +  E    P DA   A  Q++R  + +V+   L+  E R L+LRFGLEDG +       T +E+G+   V+ E IRQ   +A+ KL+
Sbjct:  182 KYIGRGLSLLDLIQEGNVGLIRAVEKFDYKKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRMMRTSRRLTQEHGREPSDEELAQALELSVEKVRSIRKTSLEP--VSLETPVGQEDDSQLGDFLPDEKLEAPSDA---ASHQMLREQVAQVLDQ-LTERERRVLKLRFGLEDGTQR------TLEEVGKEFGVTRERIRQIEVKALRKLR 388          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: UPI00194EADD7 (RNA polymerase sigma factor RpoD n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00194EADD7)

HSP 1 Score: 127 bits (320), Expect = 2.480e-31
Identity = 88/233 (37.77%), Postives = 132/233 (56.65%), Query Frame = 1
Query:    7 KNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSA-LPANVQNLDDPTLRESISGVEGRI--GGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYV 696
            K M+R LS  DL QEGS+GL++A  KFD +KG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  RI  T+  +  E G  PT+ ++A  + M  E +R   +SA LP +   L+ P  +E  S +   I   GE      SK     ++R D++ V+   LSP E   LRLR+GL+DG         T +EIG+   V+ E IRQ   +A+ KL+  +  N +L  Y+
Sbjct:  160 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHSKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPIS---LETPIGKEEDSRLGDFIEADGETPEDQVSK----SLLREDLENVLDT-LSPRERDVLRLRYGLDDGRMK------TLEEIGQIFNVTRERIRQIEAKALRKLRHPNR-NSILKEYI 377          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A9B4B0_HERA2 (RNA polymerase sigma factor SigA n=2 Tax=Herpetosiphon TaxID=64 RepID=A9B4B0_HERA2)

HSP 1 Score: 128 bits (321), Expect = 2.550e-31
Identity = 84/219 (38.36%), Postives = 132/219 (60.27%), Query Frame = 1
Query:    7 KNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHW--PWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQ 657
            K + R LSL DL QEG+VGL++AV KF+ TKG +FS+YA + I+ +I RAIA++ R +R+PVH  ++  R++ T+  +  E G  P+D +LA AL +  E VR  R++++     +L+ P  +E  S +   +  E    P DA   A  Q++R  + +V+   L+  E+R L+LRFGLEDG +       T +E+G+   V+ E IRQ   +A+ KL+
Sbjct:  181 KYIGRGLSLLDLIQEGNVGLIRAVEKFNYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRMMRTARRLTQENGREPSDEELAQALDLTVEKVRSIRKTSMEP--VSLETPVGQEEDSQLGDFLPDEKLEAPSDA---ASHQMLREQVAQVLDQ-LTEREKRVLKLRFGLEDGTQR------TLEEVGKEFGVTRERIRQIEVKALRKLR 387          
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Match: A0A7Y2SIC5_9CHLR (RNA polymerase sigma factor SigA n=1 Tax=Chloroflexales bacterium ZM16-3 TaxID=2496870 RepID=A0A7Y2SIC5_9CHLR)

HSP 1 Score: 127 bits (318), Expect = 6.490e-31
Identity = 88/235 (37.45%), Postives = 131/235 (55.74%), Query Frame = 1
Query:    1 RYKNMSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIANKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESVRLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVRRDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSAEGIRQTVFRAIAKLQESDEANGLLLAYVDLV 705
            RY++  R L L DL QEGS+GLL+A+ KFD  KG +FS+YA + IK ++ RA+A++ RLVR+PVH  ++  RI A    +    G  P D++LAL LSM EE +R  RR+A   +  +L  P   E+ S +   I   H   DA   A + ++R+ +   +   L+  E R L LR+GL DG         T +E+G+   V+ E +RQ   +A+ KL+       LL  Y+D +
Sbjct:  175 RYRD--RGLPLLDLIQEGSLGLLRAIEKFDHDKGFKFSTYATWWIKQALSRALADQSRLVRLPVHLGETLNRIQAARRQLTQSLGREPNDSELALTLSMSEEKLRELRRTA--QDPVSLATPVGEEADSTLADFIPDPH-ALDADDAAASGMLRQQIATALDQ-LTERERRVLELRYGLSDGQ------PRTLEEVGKAFGVTRERVRQIEVKALRKLRHP-RLGKLLKDYLDQI 396          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12092.1301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMH8_9PHAE4.710e-11373.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPW8_ECTSI1.700e-11271.31RpoD n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A835ZDU2_9STRA2.830e-4743.46RNA_pol_sigma70 domain-containing protein n=1 Tax=... [more]
A0A835ZES3_9STRA7.770e-3537.34RNA polymerase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A3M0YZM3_9CHLR2.210e-3238.63RNA polymerase sigma factor (Fragment) n=1 Tax=Chl... [more]
X1NP93_9ZZZZ6.960e-3236.40Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A7W1A713_9CHLR1.860e-3139.27RNA polymerase sigma factor SigA n=1 Tax=Herpetosi... [more]
UPI00194EADD72.480e-3137.77RNA polymerase sigma factor RpoD n=1 Tax=Spirulina... [more]
A9B4B0_HERA22.550e-3138.36RNA polymerase sigma factor SigA n=2 Tax=Herpetosi... [more]
A0A7Y2SIC5_9CHLR6.490e-3137.45RNA polymerase sigma factor SigA n=1 Tax=Chlorofle... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12092contigS-dermatodea_contig12092:240..947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.9
Seed ortholog evalue4.9e-88
Seed eggNOG ortholog2880.D7FPW8
KEGG koko:K03086
EggNOG free text desc.sigma factor activity
EggNOG OGs2QVXR@2759,COG0568@1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA polymerase sigma-70 region 2
Ec32 orthologEc-01_008400.1
Exons1
Model size708
Cds size696
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924230.4137344-UTR-S-dermatodea_contig12092:239..2511622924230.4137344-UTR-S-dermatodea_contig12092:239..251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12092 240..251 +
1694079110.5087876-UTR-S-dermatodea_contig12092:239..2511694079110.5087876-UTR-S-dermatodea_contig12092:239..251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12092 240..251 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924230.4245186-CDS-S-dermatodea_contig12092:251..9471622924230.4245186-CDS-S-dermatodea_contig12092:251..947Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12092 252..947 +
1694079110.5213215-CDS-S-dermatodea_contig12092:251..9471694079110.5213215-CDS-S-dermatodea_contig12092:251..947Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12092 252..947 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12092.1301.1prot_S-dermatodea_contig12092.1301.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12092 252..947 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12092.1301.1

>prot_S-dermatodea_contig12092.1301.1 ID=prot_S-dermatodea_contig12092.1301.1|Name=mRNA_S-dermatodea_contig12092.1301.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=232bp
MSRSLSLDDLTQEGSVGLLQAVNKFDPTKGTRFSSYAVFRIKASILRAIA
NKDRLVRVPVHAQDSAMRILATSHSMQLETGLLPTDAQLALALSMPEESV
RLYRRSALPANVQNLDDPTLRESISGVEGRIGGEHWPWDASKLAQAQVVR
RDMQRVMQACLSPTEERALRLRFGLEDGARGERAGALTFKEIGRTMEVSA
EGIRQTVFRAIAKLQESDEANGLLLAYVDLV*
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mRNA from alignment at S-dermatodea_contig12092:240..947+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12092.1301.1 ID=mRNA_S-dermatodea_contig12092.1301.1|Name=mRNA_S-dermatodea_contig12092.1301.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=708bp|location=Sequence derived from alignment at S-dermatodea_contig12092:240..947+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGTACAAAAACATGTCCCGGAGCCTCAGCTTGGACGACCTGACCCAGGA GGGCAGCGTGGGGCTACTCCAGGCCGTCAACAAGTTCGATCCCACCAAGG GGACACGCTTCAGCTCCTACGCGGTGTTCCGCATAAAGGCGTCCATCCTG CGCGCCATCGCCAACAAGGACCGTCTCGTCCGGGTGCCCGTTCACGCGCA GGACTCCGCGATGCGCATCCTGGCGACGTCCCACTCGATGCAGTTGGAGA CGGGCCTGCTCCCCACGGACGCGCAGCTCGCGCTCGCGCTGAGCATGCCG GAGGAGAGCGTAAGGCTGTACCGGAGGTCGGCTCTCCCCGCGAACGTGCA GAACCTGGACGACCCGACCCTCAGGGAGAGCATCAGCGGCGTGGAGGGGA GAATAGGCGGCGAGCATTGGCCGTGGGACGCGTCGAAGCTCGCGCAGGCC CAGGTGGTGCGGCGAGATATGCAGAGGGTCATGCAGGCGTGCCTTTCTCC GACGGAAGAGCGAGCGCTGCGGCTGCGGTTCGGGCTGGAGGACGGGGCGA GGGGGGAGCGGGCGGGGGCGCTGACCTTCAAGGAGATTGGACGCACCATG GAGGTCAGCGCGGAGGGCATCCGGCAGACGGTGTTCCGCGCGATCGCGAA GCTCCAGGAGTCGGACGAGGCGAACGGGCTGCTTCTCGCCTACGTCGACT TGGTTTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig12092:240..947+

>mRNA_S-dermatodea_contig12092.1301.1 ID=mRNA_S-dermatodea_contig12092.1301.1|Name=mRNA_S-dermatodea_contig12092.1301.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at S-dermatodea_contig12092:240..947+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCCCGGAGCCTCAGCTTGGACGACCTGACCCAGGAGGGCAGCGTGGG
GCTACTCCAGGCCGTCAACAAGTTCGATCCCACCAAGGGGACACGCTTCA
GCTCCTACGCGGTGTTCCGCATAAAGGCGTCCATCCTGCGCGCCATCGCC
AACAAGGACCGTCTCGTCCGGGTGCCCGTTCACGCGCAGGACTCCGCGAT
GCGCATCCTGGCGACGTCCCACTCGATGCAGTTGGAGACGGGCCTGCTCC
CCACGGACGCGCAGCTCGCGCTCGCGCTGAGCATGCCGGAGGAGAGCGTA
AGGCTGTACCGGAGGTCGGCTCTCCCCGCGAACGTGCAGAACCTGGACGA
CCCGACCCTCAGGGAGAGCATCAGCGGCGTGGAGGGGAGAATAGGCGGCG
AGCATTGGCCGTGGGACGCGTCGAAGCTCGCGCAGGCCCAGGTGGTGCGG
CGAGATATGCAGAGGGTCATGCAGGCGTGCCTTTCTCCGACGGAAGAGCG
AGCGCTGCGGCTGCGGTTCGGGCTGGAGGACGGGGCGAGGGGGGAGCGGG
CGGGGGCGCTGACCTTCAAGGAGATTGGACGCACCATGGAGGTCAGCGCG
GAGGGCATCCGGCAGACGGTGTTCCGCGCGATCGCGAAGCTCCAGGAGTC
GGACGAGGCGAACGGGCTGCTTCTCGCCTACGTCGACTTGGTTTGAATGT
CCCGGAGCCTCAGCTTGGACGACCTGACCCAGGAGGGCAGCGTGGGGCTA
CTCCAGGCCGTCAACAAGTTCGATCCCACCAAGGGGACACGCTTCAGCTC
CTACGCGGTGTTCCGCATAAAGGCGTCCATCCTGCGCGCCATCGCCAACA
AGGACCGTCTCGTCCGGGTGCCCGTTCACGCGCAGGACTCCGCGATGCGC
ATCCTGGCGACGTCCCACTCGATGCAGTTGGAGACGGGCCTGCTCCCCAC
GGACGCGCAGCTCGCGCTCGCGCTGAGCATGCCGGAGGAGAGCGTAAGGC
TGTACCGGAGGTCGGCTCTCCCCGCGAACGTGCAGAACCTGGACGACCCG
ACCCTCAGGGAGAGCATCAGCGGCGTGGAGGGGAGAATAGGCGGCGAGCA
TTGGCCGTGGGACGCGTCGAAGCTCGCGCAGGCCCAGGTGGTGCGGCGAG
ATATGCAGAGGGTCATGCAGGCGTGCCTTTCTCCGACGGAAGAGCGAGCG
CTGCGGCTGCGGTTCGGGCTGGAGGACGGGGCGAGGGGGGAGCGGGCGGG
GGCGCTGACCTTCAAGGAGATTGGACGCACCATGGAGGTCAGCGCGGAGG
GCATCCGGCAGACGGTGTTCCGCGCGATCGCGAAGCTCCAGGAGTCGGAC
GAGGCGAACGGGCTGCTTCTCGCCTACGTCGACTTGGTTTGA
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