prot_S-dermatodea_contig12086.1299.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12086.1299.1
Unique Nameprot_S-dermatodea_contig12086.1299.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length93
Homology
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BLAST of mRNA_S-dermatodea_contig12086.1299.1 vs. uniprot
Match: D8LEW0_ECTSI (20S proteasome subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW0_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 4.090e-22
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:    1 PSGAFAEWTASAVGKASEKALGKLEAVSDLSALDWRGTAEAAVKATLAGGATECDVLVLR 60
            PSGA+AEWTASAVGKAS+KALG+LEAV DL ALDWRGTAEAAV+A LAGGA  CDVLVLR
Sbjct:  236 PSGAYAEWTASAVGKASDKALGRLEAVPDLGALDWRGTAEAAVRAALAGGAKYCDVLVLR 295
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BLAST of mRNA_S-dermatodea_contig12086.1299.1 vs. uniprot
Match: A0A6H5K8Y9_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y9_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 6.130e-21
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0 
Query:    1 PSGAFAEWTASAVGKASEKALGKLEAVSDLSALDWRGTAEAAVKATLAGGATECDVLVLR 60
            PSGA+AEW ASAVGKAS+KAL KLE+V DL ALDWRGTAEAAV+A LAGGA ECDVLVLR
Sbjct:  544 PSGAYAEWAASAVGKASDKALDKLESVPDLGALDWRGTAEAAVRAALAGGAKECDVLVLR 603
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12086.1299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEW0_ECTSI4.090e-2285.0020S proteasome subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K8Y9_9PHAE6.130e-2183.33PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12086contigS-dermatodea_contig12086:4544..6397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12086.1299.1mRNA_S-dermatodea_contig12086.1299.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12086 4543..6397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12086.1299.1 ID=prot_S-dermatodea_contig12086.1299.1|Name=mRNA_S-dermatodea_contig12086.1299.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=93bp
PSGAFAEWTASAVGKASEKALGKLEAVSDLSALDWRGTAEAAVKATLAGG
ATECDVLVLRCQAPQGATTANPAAEDDGDEARPASSADTLGVA
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