prot_S-dermatodea_contig12056.1278.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12056.1278.1
Unique Nameprot_S-dermatodea_contig12056.1278.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length160
Homology
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BLAST of mRNA_S-dermatodea_contig12056.1278.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 8.380e-40
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0 
Query:    1 VFRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPGEKAYTPLHRAALGGHGEVTRILIKAGADKDARTGGSGA 77
            + RLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEP EKAYTPLHRA LGGH EV R+LIKAGADKDARTGGSGA
Sbjct:   82 IRRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPSEKAYTPLHRAVLGGHSEVARVLIKAGADKDARTGGSGA 158
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12056.1278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH38_ECTSI8.380e-4090.91Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 42..57
score: 41.76
coord: 91..105
score: 37.07
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 41..70
e-value: 0.0086
score: 25.3
coord: 109..138
e-value: 0.0034
score: 26.6
coord: 75..104
e-value: 0.0039
score: 26.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..107
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 11.968
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 41..73
score: 12.449
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 101..160
e-value: 4.6E-16
score: 61.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..100
e-value: 1.2E-16
score: 62.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 23..159
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 46..140
e-value: 1.0E-15
score: 58.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 41..160
score: 37.666
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 42..104
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 75..159
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 75..159
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 42..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12056contigS-dermatodea_contig12056:1444..6622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12056.1278.1mRNA_S-dermatodea_contig12056.1278.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12056 1444..6622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12056.1278.1 ID=prot_S-dermatodea_contig12056.1278.1|Name=mRNA_S-dermatodea_contig12056.1278.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=160bp
VFRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPGEKAYTPLHRAA
LGGHGEVTRILIKAGADKDARTGGSGAAPLHLAARKGHEVCVRTLLLTGA
DRDARRGLDGATPLHQAAFFGQMGAVQELLNAVANPNAQDAEGCTPVFLA
AQEGHEEVCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom