prot_S-dermatodea_contig11960.1228.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11960.1228.1
Unique Nameprot_S-dermatodea_contig11960.1228.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length73
Homology
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.580e-35
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0
Query:    1 DQVEKIREVVNLNFPPRDGRPSNGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVVT 73
            +Q EKIREVV  NFP  DGRPSNG+LLEPA IVSWGGFS+TLACLYGIA +L+WD+GWDYFINLST+DFPVVT
Sbjct:  130 EQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVT 202          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 6.090e-35
Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0
Query:    1 DQVEKIREVVNLNFPPRDGRPSNGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVVT 73
            +Q EKIREVV  NFP  DGRP NGRLLEPA IVSWGGFS+TLACLYGIA +L+WD+GWDYFINLST+DFPVVT
Sbjct:  190 EQTEKIREVVRANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVT 262          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 3.580e-13
Identity = 28/50 (56.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:   23 NGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVV 72
            N R+LEPA+ VSWGG+++TL  ++GI T + W+D WD+FINLS +DFP++
Sbjct:  230 NVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLL 279          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 6.590e-13
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   23 NGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVVT 73
            N R+LEPA  VSWGG+S+TL  L+G++T + W   WDYFINLS  DFP+++
Sbjct:  184 NARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLS 234          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.820e-10
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    6 IREVVNLNFPPRDGRPSNGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVV 72
            +   +      R     N R ++PA+ V+WGGF++TL  +YG+  +L W+  WDYFINLS +D P++
Sbjct:  134 VESGIERMLDERGNGERNVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL 200          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 5.150e-10
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   23 NGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVV 72
            N R + PA+ ++WGGF++TL  +YG+  +L W+  WDYFINLS +D P++
Sbjct:   58 NVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL 107          
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.920e-8
Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   21 PSNGRLLEPAVIVSWGGFSLTLACLYGIATSLMWDDGWDYFINLSTADFPVVT 73
            P N +L++  V VSWG FS+ L  L+G+++++ W   WD++INLS AD P++T
Sbjct:  101 PKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLT 153          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11960.1228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KBR7_9PHAE1.580e-3580.82GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LDZ1_ECTSI6.090e-3580.82Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus... [more]
A0A6H5L6Q9_9PHAE3.580e-1356.00Protein xylosyltransferase n=2 Tax=Ectocarpus TaxI... [more]
A0A6H5L1U8_9PHAE6.590e-1356.86GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A6H5KJT8_9PHAE1.820e-1038.81Protein xylosyltransferase (Fragment) n=1 Tax=Ecto... [more]
D8LCA7_ECTSI5.150e-1048.00Protein xylosyltransferase n=1 Tax=Ectocarpus sili... [more]
A0A835YZY2_9STRA1.920e-845.28Core-2/I-branching enzyme-domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003406Glycosyl transferase, family 14PFAMPF02485Branchcoord: 22..73
e-value: 4.8E-7
score: 29.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11960contigS-dermatodea_contig11960:182..400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11960.1228.1mRNA_S-dermatodea_contig11960.1228.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11960 182..400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11960.1228.1 ID=prot_S-dermatodea_contig11960.1228.1|Name=mRNA_S-dermatodea_contig11960.1228.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=73bp
DQVEKIREVVNLNFPPRDGRPSNGRLLEPAVIVSWGGFSLTLACLYGIAT
SLMWDDGWDYFINLSTADFPVVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003406Glyco_trans_14