prot_S-dermatodea_contig11935.1213.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11935.1213.1
Unique Nameprot_S-dermatodea_contig11935.1213.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length467
Homology
BLAST of mRNA_S-dermatodea_contig11935.1213.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.660e-81
Identity = 236/517 (45.65%), Postives = 293/517 (56.67%), Query Frame = 0
Query:   10 QAFQSTFLAPIPRTMYHAAALSSPLVPATTMRIFSSPWDPEC--------SRMQQR--------------LRRGGIQRRR-RLDPMIFAPPSVFQDDSQLEIRDPAVA-ETGDSYRLTFDLPAEVEEDGVDVSVSDRLLTIKARVTQEDLGGHRARRRGGGWATSSSRTDSVSRSFVLPEGVSADGVEASWVSDGKVEVKFSKDPT-KAKAADGAAXXXXXXXTGDSPAAASTVSQAVSSTGSTAHTGEDKVPSPPTSAEYLSSLSGAKATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRESQRSSRSPQSVFEALDSEFGEFAKAMWGEDVL---RFPTQEEMAERAEAAREXXAKR------------------VTAIRRATMATNVSEMEDGS-YLVKVALPEGTTRDDVTLTVTPGDALRV------TFAAEGRRSLYKDVRLPKDALFSEISAKFEAEGEKE-----EDGGDEASSA---AVKEEGVSGLEVAVGRAVPPQPKRVDI 465
            QAF STFL+P    M+ + + SS  VP TT+ +   PWD EC         R + R               R  GIQR R    PMIFAP S  Q +  L++ DPAV  ET D Y L FDLPA V+ DG++VSVSDRLLT+KA +T+E        R  GGW T SSR DSVSRSFVLPEG+      AS +S+GK EV+F+KD + + +AA  AA       TG + +A  T +   SS         D   +PPT +      +G+ A A XXXXXXXXXXXX                 A+    R SR P   FEA+D EF EFAKAMWGE VL   + PTQEE+AE+A  ARE   KR                  V A+RRATMA N+S  E+GS Y+V+ ALPEGTTR+DV LTV P +++RV      T AA   R +YKDV LPKDA+ SEISAKFEAE  ++     E+ G+EA++    A KE  V+G+EV VG+A PPQPK V+I
Sbjct:   19 QAFTSTFLSPSKLAMHRSTSPSSTAVPTTTVTMDCGPWDLECYGVHPFGSERGRGRGVRXXXXXXXXXXXRRNRGIQRYRPSFGPMIFAP-SEGQANQHLQVGDPAVILETNDLYTLAFDLPAGVDHDGLEVSVSDRLLTVKASITREQEADPFITR--GGWVTRSSRVDSVSRSFVLPEGLVESSATAS-LSEGKAEVRFNKDKSVRGEAASTAAPPITPSTTGTAASAGDTTAAPTSSA--------DAGRTPPTDS------TGSTAVAEXXXXXXXXXXXXPVDAASTP---------AASTEPRPSR-PTFPFEAVDQEFREFAKAMWGEHVLERLQVPTQEELAEQAAMAREAWTKRXXXXXXXXXXXXXXXXKRVLAMRRATMAANISLSEEGSSYVVRFALPEGTTREDVKLTVNPSNSIRVAVSARSTAAAGPDRPVYKDVVLPKDAILSEISAKFEAEQHRDGKGTIEEEGEEATAGGGGATKEGAVAGVEVTVGKASPPQPKHVEI 507          
BLAST of mRNA_S-dermatodea_contig11935.1213.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 3.010e-79
Identity = 242/520 (46.54%), Postives = 297/520 (57.12%), Query Frame = 0
Query:   10 QAFQSTFLAPIPRTMYHAAALSSPLVPATTMRIFSSPWDPEC------SRMQQRLRRG------------GIQRRR-RLDPMIFAPPSVFQDDSQLEIRDPAVA-ETGDSYRLTFDLPAEVEEDGVDVSVSDRLLTIKARVTQEDLGGHRARRRGGGWATSSSRTDSVSRSFVLPEGVSADGVEASWVSDGKVEVKFSKDPT-KAKAADGAAXXXXXXXTGDSPAAASTVSQAVSSTGSTAHTGEDKVPSPPTSAEYLSSLSGAKATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRESQRSSRSPQSVFEALDSEFGEFAKAMWGEDVL---RFPTQEEMAERAEAAREXXAKR------------------VTAIRRATMATNVSEMEDGS-YLVKVALPEGTTRDDVTLTVTPGDALRVTFAAEGR-------------RSLYKDVRLPKDALFSEISAKFEAEGEKEE-----DGGDEASSA---AVKEEGVSGLEVAVGRAVPPQPKRVDI 465
            QAF S+F +P    M+ + + SS  VP TT+ +  SPWD EC       R + R R G            G+QR R    PMIFAP S  Q +  L + DP +  ET D Y L FDLPA V+ DG+DVSVSDRLLT+KA +T+E        R  GGW T SSR DSVSRSFVLPEG+      AS +++ K EV+F+KD + + +AA  AA       TG            V+S G T            T+A   S+ +G          X XXXXXXXXXXXXXXXXXXXXXXX      R SR P S FEA+D EF EFAKAMWGEDVL   + PTQEE+AE+A  ARE  AKR                  V A+RRATMA ++S  EDGS Y+V+ ALPEGTTR+DV LTV P  ++RV  +A                RS+YKDV LPKDA+ SEISAKFEAE   +E     +GG++A++    A KE  V+G+EV VG+A PPQPK V+I
Sbjct:   19 QAFTSSFFSPSKLAMHRSPSSSSTAVPTTTVTMDCSPWDLECYGVDPFGRERGRGRGGXXXXXXXXXRKRGMQRYRPSFGPMIFAP-SEGQPNQHLRVGDPVIILETDDLYALAFDLPAGVDHDGLDVSVSDRLLTVKASITREQEADPFTTR--GGWVTRSSRVDSVSRSFVLPEGLVESSATAS-LAESKAEVRFNKDKSVRGEAASTAAPPVTPSTTGT-----------VASAGDT------------TAAPASSADAGRTPLTDSTGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRPSR-PASPFEAVDQEFREFAKAMWGEDVLERLQVPTQEELAEQAAMAREAWAKREAXXXXXXXXXXXXXXXRVLAMRRATMAADISLSEDGSSYVVRFALPEGTTREDVKLTVNPSKSIRVAVSATSXXXXXXXXXXXXPDRSVYKDVALPKDAILSEISAKFEAEQHPDEKGNAEEGGEKATAGGGGATKEGAVAGVEVTVGKASPPQPKNVEI 510          
BLAST of mRNA_S-dermatodea_contig11935.1213.1 vs. uniprot
Match: D7FTP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP7_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.010e-40
Identity = 153/416 (36.78%), Postives = 205/416 (49.28%), Query Frame = 0
Query:   74 FAPPSVFQDDSQLEIRDPAVAETGDSYRLTFDLPAEVEEDGVDVSVSDRLLTIKARVTQE----------DLGGHRARRRGGGWATS--SSRTDSVSRSFVLPEGVSADGVEASWVSDGKVEVKFSK----DPTKAKAADGAAXXXXXXXTGDSPAAASTVSQAVSSTGSTAHTGEDKVPSPPTSA-EYL--SSLSGAKATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRESQRSSRSPQSVFEALDSEFGEFAKAMW-GEDVLRFPTQEEMAERAEAAREXXAKRVTAIRRATMATNVSEMEDGSYLVKVALPEGTTRDDVTLTVTP-GDALRVTFAAEGRRSLYKDVRLPKDALFSEISAKFEAEGEKEEDGGDEASS--AAVKEEGVSGLEVAVGRAVPPQPKRVDIR 466
            F  P V ++   + I DP V ET   Y LTF+LP+ + + G++VSVS RLLT++AR T+E          D G   ++    GW  +  +++T++ +RSF LP+ VS + V ASW +D +V +  +K    DP  A               G      ST+  +        H G+D+ PS  +SA EYL  S L GA                                          S  P S+ E LD EF    + MW G+  +RFPT+E++A     AR+   K V A+RRATMAT+VSE E   Y+VK ALP+G TRDDV L VTP  + LRV F  EG   + K V LP DA FS+ISA+F  E  K   GG          K   V+GLEVAVGRA P  PK ++I+
Sbjct:   93 FDLPLVLEE-CPMCIPDPEVRETDAGYALTFNLPSGISDTGLEVSVSGRLLTVEARTTREENHDVISKSADKGSEGSK----GWVMTRCTTKTNAAARSFTLPDSVSNE-VTASWGNDNQVVINLTKVAHYDPVNA---------------GGMNNVFSTMEDSGVVPVERRH-GDDQHPSASSSAAEYLYGSKLDGA------------------------------------------SLKPSSILE-LDLEFRSLVRDMWHGDGSVRFPTEEQVAATVARARKERKKIVKALRRATMATDVSEKEL-EYVVKFALPQGATRDDVELMVTPDNNGLRVAFFGEGNHMVSKAVCLPSDASFSDISARFTPEPRKRGRGGAAGGGLEGGKKSRNVAGLEVAVGRAAPQLPKSIEIK 442          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11935.1213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L316_9PHAE1.660e-8145.65SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LP10_ECTSI3.010e-7946.54SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTP7_ECTSI1.010e-4036.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 41..197
e-value: 1.9E-14
score: 55.6
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 86..185
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 94..194
e-value: 3.2E-9
score: 36.8
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 79..204
score: 11.129
IPR031107Small heat shock protein HSP20PANTHERPTHR11527HEAT-SHOCK PROTEIN 20 FAMILY MEMBERcoord: 92..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11935contigS-dermatodea_contig11935:1803..4153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11935.1213.1mRNA_S-dermatodea_contig11935.1213.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11935 1803..4168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11935.1213.1 ID=prot_S-dermatodea_contig11935.1213.1|Name=mRNA_S-dermatodea_contig11935.1213.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=467bp
MLACNACPAQAFQSTFLAPIPRTMYHAAALSSPLVPATTMRIFSSPWDPE
CSRMQQRLRRGGIQRRRRLDPMIFAPPSVFQDDSQLEIRDPAVAETGDSY
RLTFDLPAEVEEDGVDVSVSDRLLTIKARVTQEDLGGHRARRRGGGWATS
SSRTDSVSRSFVLPEGVSADGVEASWVSDGKVEVKFSKDPTKAKAADGAA
AAAAAAATGDSPAAASTVSQAVSSTGSTAHTGEDKVPSPPTSAEYLSSLS
GAKATAGAAAANANVGASAAVPTAKSSPPPPADADAASRESQRSSRSPQS
VFEALDSEFGEFAKAMWGEDVLRFPTQEEMAERAEAAREARAKRVTAIRR
ATMATNVSEMEDGSYLVKVALPEGTTRDDVTLTVTPGDALRVTFAAEGRR
SLYKDVRLPKDALFSEISAKFEAEGEKEEDGGDEASSAAVKEEGVSGLEV
AVGRAVPPQPKRVDIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom
IPR031107HSP20