prot_S-dermatodea_contig11811.1148.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11811.1148.1
Unique Nameprot_S-dermatodea_contig11811.1148.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length260
Homology
BLAST of mRNA_S-dermatodea_contig11811.1148.1 vs. uniprot
Match: A0A6H5JHQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 9.100e-56
Identity = 135/233 (57.94%), Postives = 155/233 (66.52%), Query Frame = 0
Query:   32 EKPRSRSRSHSMVDG--GGHSLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE-----LSQVKEKEEYTSLEGYGDGAGMHVQYAVANA-GTSIAPPHSASASNIADLDIVMGSQFPEEDIGTSSNGGNPGGSGSSMTGGGGARGDRY-PQRYQGRSSV-GLAAGMGYNPISAGWTDFAESIQLDSKLPGAGDGGAGGLSPFMAGDGGIGGSRGGTRRHLPGWDLEPVDA 254
            EK R+RSRSHSM  G  G + LDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE     LSQVK+KE+Y S EGY DGAG++VQYAVAN  G + APPH++SASNIADLDIVMGSQFP+         GN G           A GDR+ P  YQGRS+   L   M YN +S  W+DFAE+I  D+K     D GAGG S  ++G  G  G  GG R  L  WD +P D+
Sbjct: 1196 EKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAIVGPLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPD---------GNSGXXXXXXX----ATGDRFQPMGYQGRSAKRSLTPSMNYNQVSTAWSDFAEAI--DAKHV---DDGAGGFSDLVSGAAGGNGQFGGGRGGLNDWDFDPPDS 1410          
BLAST of mRNA_S-dermatodea_contig11811.1148.1 vs. uniprot
Match: D7G2K1_ECTSI (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 5.510e-45
Identity = 108/167 (64.67%), Postives = 120/167 (71.86%), Query Frame = 0
Query:   32 EKPRSRSRSHSMVDG--GGHSLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKEKEEYTSLEGYGDGAGMHVQYAVANA-GTSIAPPHSASASNIADLDIVMGSQFPEEDIGTSSNGGNPGGSGSSMTGGGGARGDRY-PQRYQGRSSV-GLAAGMGYN 193
            EK R+RSRSHSM  G  G + LDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVK+KE+Y S EGY DGAG++VQYAVAN  G + APPH++SASNIADLDIVMGSQFP+            G SG        A GDR+ P  Y GRS+   L   M YN
Sbjct:  620 EKVRTRSRSHSMHMGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPD------------GNSGXXXXXXXXATGDRFQPMGYLGRSAKRSLTPSMNYN 774          
BLAST of mRNA_S-dermatodea_contig11811.1148.1 vs. uniprot
Match: A0A836CNA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.130e-6
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   51 LDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELS 87
            LDLPINTFSCTVGLK+SQA YYIKS  A  AL K+LS
Sbjct:  362 LDLPINTFSCTVGLKVSQAQYYIKSRQAVGALLKDLS 398          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11811.1148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHQ0_9PHAE9.100e-5657.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K1_ECTSI5.510e-4564.67Alpha,alpha-trehalose-phosphate synthase n=1 Tax=E... [more]
A0A836CNA9_9STRA4.130e-678.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11811contigS-dermatodea_contig11811:219..4176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11811.1148.1mRNA_S-dermatodea_contig11811.1148.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11811 219..4177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11811.1148.1 ID=prot_S-dermatodea_contig11811.1148.1|Name=mRNA_S-dermatodea_contig11811.1148.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=260bp
GGTEHREPQQWTADFAGERRARDTRSGEGQHEKPRSRSRSHSMVDGGGHS
LDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKEKEEYTSLEG
YGDGAGMHVQYAVANAGTSIAPPHSASASNIADLDIVMGSQFPEEDIGTS
SNGGNPGGSGSSMTGGGGARGDRYPQRYQGRSSVGLAAGMGYNPISAGWT
DFAESIQLDSKLPGAGDGGAGGLSPFMAGDGGIGGSRGGTRRHLPGWDLE
PVDAGWGPLL
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