prot_S-dermatodea_contig11756.1109.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11756.1109.1
Unique Nameprot_S-dermatodea_contig11756.1109.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length96
Homology
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A6H5L5D9_9PHAE (Uroporphyrinogen_deCOase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D9_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.150e-46
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMS--GVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQ 95
            MDTETGRKATRDALEEAARE GREPAVVQGNFDPRLLTD S MS   VREAT  MMRELGPQKLIANLGEGLMG+EDP+SVAAFVDAIH++SE+L++
Sbjct:  221 MDTETGRKATRDALEEAAREIGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIR 317          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: D8LH59_ECTSI (Uroporphyrinogen decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH59_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.560e-46
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMS--GVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQ 95
            MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTD S MS   VREAT  MMRELGPQKLIANLGEGLMG+EDP+SVAAFVDAIH++SE+L++
Sbjct:  322 MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIR 418          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z5_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Trachelomonas ellipsoidalis TaxID=253960 RepID=A0A1L3A3Z5_9EUGL)

HSP 1 Score: 100 bits (248), Expect = 2.900e-24
Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREP---AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            +DT+T R ATR+AL+      G      A VQGN D  LL   + +  VREAT+ M+RELGPQ LIANLGEGLMG+EDPR V AFVDA+HE SE +++R
Sbjct:  110 LDTKTSRVATREALQADFAVNGSPAGHVAGVQGNLDVALLQSGTELQ-VREATAQMLRELGPQGLIANLGEGLMGKEDPRLVTAFVDAVHELSEEMIRR 207          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A408_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Trachelomonas volvocina TaxID=103340 RepID=A0A1L3A408_9EUGL)

HSP 1 Score: 99.8 bits (247), Expect = 7.860e-23
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREPAVV---QGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            MDT+T RKATR ALE   +  G     V   QGNFD +LL D +    VREA + M+++LGPQ LIANLGEGLMG+EDPR V  FVDA+HE SE+++++
Sbjct:  286 MDTKTDRKATRAALEADFKAHGSPTGRVSGLQGNFDVKLLQDGTEEQ-VREAVAKMLQDLGPQGLIANLGEGLMGKEDPRLVTTFVDAVHEISEQMIRK 383          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z1_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Discoplastis spathirhyncha TaxID=215771 RepID=A0A1L3A3Z1_9EUGL)

HSP 1 Score: 97.4 bits (241), Expect = 5.610e-22
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETG---REPAVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            MDT+T RK TR ALE   +  G   +  + VQGN D +LL D +    VR+ T+ M+ ELGPQ LIANLGEGLMG+EDPR V AFVDA+H+ SE+++++
Sbjct:  285 MDTKTDRKGTRAALEADFKAHGSPNKRVSGVQGNLDVKLLQDGTEEQ-VRQETARMLEELGPQGLIANLGEGLMGKEDPRLVGAFVDAVHQISEQMIKK 382          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z6_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Eutreptiella braarudii TaxID=215697 RepID=A0A1L3A3Z6_9EUGL)

HSP 1 Score: 95.5 bits (236), Expect = 2.980e-21
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREPAV----VQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLV 94
            MDT+T RKATR AL+ A  E    PA     VQGNFD  LL + S  + VR+A + ++++LGPQ+LIANLGEGLMG+E+P  V AFV+A+HE SE+++
Sbjct:  286 MDTKTDRKATRAALQ-ADFEANGAPAGRVSGVQGNFDVALLREPSTEAQVRDAVATLLQDLGPQQLIANLGEGLMGKENPELVTAFVNAVHEISEQMI 382          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z7_EUGST (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena stellata TaxID=38278 RepID=A0A1L3A3Z7_EUGST)

HSP 1 Score: 95.1 bits (235), Expect = 3.090e-21
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREP---AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            +DT+T RKATR AL    +  G      A VQGN D  LL D +    V++AT+ ++ ELGPQ LIANLGEGLMG+EDP+ VA FVDA+HE SE++++R
Sbjct:  259 LDTKTDRKATRAALLADFQANGSPSGHMAGVQGNLDVVLLQDGTEQQ-VKDATAKLLEELGPQGLIANLGEGLMGKEDPKLVATFVDAVHEISEKMIRR 356          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Y8_EUGVI (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena viridis TaxID=3040 RepID=A0A1L3A3Y8_EUGVI)

HSP 1 Score: 95.1 bits (235), Expect = 8.940e-21
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREPAV---VQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            MDT+T RKATR AL+      G        VQGN D  LLT  +    VR+AT+ ++++LGPQ LIANLGEGLMG+EDP+ VA FVDA+HE SE+++ +
Sbjct:  470 MDTKTDRKATRAALQADFEANGSPTGHITGVQGNLDVALLTTGTEQQ-VRDATAQLLQDLGPQGLIANLGEGLMGKEDPKLVATFVDAVHELSEKMITK 567          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A400_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Phacus inflexus TaxID=461210 RepID=A0A1L3A400_9EUGL)

HSP 1 Score: 93.6 bits (231), Expect = 1.500e-20
Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGR---EPAVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            +DT+T R+ATR AL     + G     PA VQGN D  LL D + +  V+  T  M+ ELGPQ LIANLGEGLMG+EDPR V+AFVDA+HE S +++ +
Sbjct:  286 LDTKTPRQATRAALRADFEQNGSPSGHPAGVQGNLDVTLLQDGT-VEQVQAETIRMLEELGPQGLIANLGEGLMGKEDPRLVSAFVDAVHELSAKMIAK 383          
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Y6_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Colacium vesiculosum TaxID=102910 RepID=A0A1L3A3Y6_9EUGL)

HSP 1 Score: 89.4 bits (220), Expect = 6.610e-20
Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    1 MDTETGRKATRDALEEAARETGREP----AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 96
            +DT+  RKATR AL+ A  E    P    A VQGN D  LL   +    VREA + ++ + GPQ LIANLGEGLMG+EDP+ VA FVDAIHE SE+++ +
Sbjct:  128 LDTKADRKATRAALK-ADFEANGSPIGRVAGVQGNLDVALLQSGTEQQ-VREAAAQLLEDFGPQDLIANLGEGLMGKEDPKLVATFVDAIHEISEKMIAK 225          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5D9_9PHAE2.150e-4684.54Uroporphyrinogen_deCOase domain-containing protein... [more]
D8LH59_ECTSI2.560e-4685.57Uroporphyrinogen decarboxylase n=1 Tax=Ectocarpus ... [more]
A0A1L3A3Z5_9EUGL2.900e-2456.57Plastid uroporphyrinogen decarboxylase isoform 1 (... [more]
A0A1L3A408_9EUGL7.860e-2355.56Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A1L3A3Z1_9EUGL5.610e-2253.54Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A1L3A3Z6_9EUGL2.980e-2154.08Plastid uroporphyrinogen decarboxylase isoform 1 (... [more]
A0A1L3A3Z7_EUGST3.090e-2153.54Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A1L3A3Y8_EUGVI8.940e-2152.53Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A1L3A400_9EUGL1.500e-2052.53Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A1L3A3Y6_9EUGL6.610e-2052.00Plastid uroporphyrinogen decarboxylase isoform 1 (... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000257Uroporphyrinogen decarboxylase (URO-D)PFAMPF01208URO-Dcoord: 12..89
e-value: 1.2E-11
score: 44.4
IPR038071UROD/MetE-like superfamilyGENE3D3.20.20.210coord: 6..96
e-value: 1.6E-16
score: 62.0
IPR038071UROD/MetE-like superfamilySUPERFAMILY51726UROD/MetE-likecoord: 14..93
NoneNo IPR availablePANTHERPTHR21091:SF169UROPORPHYRINOGEN DECARBOXYLASEcoord: 15..94
NoneNo IPR availablePANTHERPTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDcoord: 15..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11756contigS-dermatodea_contig11756:4199..4973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11756.1109.1mRNA_S-dermatodea_contig11756.1109.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11756 4199..5000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11756.1109.1 ID=prot_S-dermatodea_contig11756.1109.1|Name=mRNA_S-dermatodea_contig11756.1109.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=96bp
MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMSGVREAT
SAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000257Uroporphyrinogen_deCOase
IPR038071UROD/MetE-like_sf