mRNA_S-dermatodea_contig11756.1109.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A6H5L5D9_9PHAE (Uroporphyrinogen_deCOase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5D9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 2.710e-53 Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMS--GVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQ 312
QAAGYDVVTMDTETGRKATRDALEEAARE GREPAVVQGNFDPRLLTD S MS VREAT MMRELGPQKLIANLGEGLMG+EDP+SVAAFVDAIH++SE+L++
Sbjct: 212 QAAGYDVVTMDTETGRKATRDALEEAAREIGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIR 317
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: D8LH59_ECTSI (Uroporphyrinogen decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH59_ECTSI) HSP 1 Score: 180 bits (457), Expect = 3.920e-53 Identity = 92/106 (86.79%), Postives = 99/106 (93.40%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMS--GVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQ 312
QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTD S MS VREAT MMRELGPQKLIANLGEGLMG+EDP+SVAAFVDAIH++SE+L++
Sbjct: 313 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYSEQLIR 418
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z5_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Trachelomonas ellipsoidalis TaxID=253960 RepID=A0A1L3A3Z5_9EUGL) HSP 1 Score: 115 bits (289), Expect = 2.830e-30 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREP---AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD+VT+DT+T R ATR+AL+ G A VQGN D LL + + VREAT+ M+RELGPQ LIANLGEGLMG+EDPR V AFVDA+HE SE +++R
Sbjct: 101 QQAGYDIVTLDTKTSRVATREALQADFAVNGSPAGHVAGVQGNLDVALLQSGTELQ-VREATAQMLRELGPQGLIANLGEGLMGKEDPRLVTAFVDAVHELSEEMIRR 207
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A408_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Trachelomonas volvocina TaxID=103340 RepID=A0A1L3A408_9EUGL) HSP 1 Score: 115 bits (287), Expect = 1.900e-28 Identity = 61/108 (56.48%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVV---QGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD++TMDT+T RKATR ALE + G V QGNFD +LL D + VREA + M+++LGPQ LIANLGEGLMG+EDPR V FVDA+HE SE+++++
Sbjct: 277 QQAGYDIITMDTKTDRKATRAALEADFKAHGSPTGRVSGLQGNFDVKLLQDGTEEQ-VREAVAKMLQDLGPQGLIANLGEGLMGKEDPRLVTTFVDAVHEISEQMIRK 383
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z1_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Discoplastis spathirhyncha TaxID=215771 RepID=A0A1L3A3Z1_9EUGL) HSP 1 Score: 112 bits (281), Expect = 1.390e-27 Identity = 59/108 (54.63%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETG---REPAVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD++TMDT+T RK TR ALE + G + + VQGN D +LL D + VR+ T+ M+ ELGPQ LIANLGEGLMG+EDPR V AFVDA+H+ SE+++++
Sbjct: 276 QQAGYDIITMDTKTDRKGTRAALEADFKAHGSPNKRVSGVQGNLDVKLLQDGTEEQ-VRQETARMLEELGPQGLIANLGEGLMGKEDPRLVGAFVDAVHQISEQMIKK 382
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z7_EUGST (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena stellata TaxID=38278 RepID=A0A1L3A3Z7_EUGST) HSP 1 Score: 110 bits (275), Expect = 7.130e-27 Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREP---AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD++T+DT+T RKATR AL + G A VQGN D LL D + V++AT+ ++ ELGPQ LIANLGEGLMG+EDP+ VA FVDA+HE SE++++R
Sbjct: 250 QQAGYDIITLDTKTDRKATRAALLADFQANGSPSGHMAGVQGNLDVVLLQDGTEQQ-VKDATAKLLEELGPQGLIANLGEGLMGKEDPKLVATFVDAVHEISEKMIRR 356
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A400_9EUGL (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Phacus inflexus TaxID=461210 RepID=A0A1L3A400_9EUGL) HSP 1 Score: 108 bits (271), Expect = 3.940e-26 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGR---EPAVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD++T+DT+T R+ATR AL + G PA VQGN D LL D + + V+ T M+ ELGPQ LIANLGEGLMG+EDPR V+AFVDA+HE S +++ +
Sbjct: 277 QQAGYDIITLDTKTPRQATRAALRADFEQNGSPSGHPAGVQGNLDVTLLQDGT-VEQVQAETIRMLEELGPQGLIANLGEGLMGKEDPRLVSAFVDAVHELSAKMIAK 383
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Z6_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Eutreptiella braarudii TaxID=215697 RepID=A0A1L3A3Z6_9EUGL) HSP 1 Score: 108 bits (271), Expect = 4.040e-26 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAV----VQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLV 309
Q AGY+++TMDT+T RKATR AL+ A E PA VQGNFD LL + S + VR+A + ++++LGPQ+LIANLGEGLMG+E+P V AFV+A+HE SE+++
Sbjct: 277 QQAGYNIITMDTKTDRKATRAALQ-ADFEANGAPAGRVSGVQGNFDVALLREPSTEAQVRDAVATLLQDLGPQQLIANLGEGLMGKENPELVTAFVNAVHEISEQMI 382
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Y8_EUGVI (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Euglena viridis TaxID=3040 RepID=A0A1L3A3Y8_EUGVI) HSP 1 Score: 110 bits (275), Expect = 4.280e-26 Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREPAV---VQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AGYD++TMDT+T RKATR AL+ G VQGN D LLT + VR+AT+ ++++LGPQ LIANLGEGLMG+EDP+ VA FVDA+HE SE+++ +
Sbjct: 461 QQAGYDIITMDTKTDRKATRAALQADFEANGSPTGHITGVQGNLDVALLTTGTEQQ-VRDATAQLLQDLGPQGLIANLGEGLMGKEDPKLVATFVDAVHELSEKMITK 567
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Match: A0A1L3A3Y6_9EUGL (Plastid uroporphyrinogen decarboxylase isoform 1 (Fragment) n=1 Tax=Colacium vesiculosum TaxID=102910 RepID=A0A1L3A3Y6_9EUGL) HSP 1 Score: 103 bits (257), Expect = 2.850e-25 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 QAAGYDVVTMDTETGRKATRDALEEAARETGREP----AVVQGNFDPRLLTDNSPMSGVREATSAMMRELGPQKLIANLGEGLMGREDPRSVAAFVDAIHEFSERLVQR 315
Q AG+D+VT+DT+ RKATR AL+ A E P A VQGN D LL + VREA + ++ + GPQ LIANLGEGLMG+EDP+ VA FVDAIHE SE+++ +
Sbjct: 119 QQAGFDIVTLDTKADRKATRAALK-ADFEANGSPIGRVAGVQGNLDVALLQSGTEQQ-VREAAAQLLEDFGPQDLIANLGEGLMGKEDPKLVATFVDAIHEISEKMIAK 225 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11756.1109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11756.1109.1 >prot_S-dermatodea_contig11756.1109.1 ID=prot_S-dermatodea_contig11756.1109.1|Name=mRNA_S-dermatodea_contig11756.1109.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=96bp MDTETGRKATRDALEEAARETGREPAVVQGNFDPRLLTDNSPMSGVREATback to top mRNA from alignment at S-dermatodea_contig11756:4199..5000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11756.1109.1 ID=mRNA_S-dermatodea_contig11756.1109.1|Name=mRNA_S-dermatodea_contig11756.1109.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=802bp|location=Sequence derived from alignment at S-dermatodea_contig11756:4199..5000- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11756:4199..5000- >mRNA_S-dermatodea_contig11756.1109.1 ID=mRNA_S-dermatodea_contig11756.1109.1|Name=mRNA_S-dermatodea_contig11756.1109.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at S-dermatodea_contig11756:4199..5000- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |