prot_S-dermatodea_contig1175.1107.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1175.1107.1
Unique Nameprot_S-dermatodea_contig1175.1107.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length52
Homology
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.670e-18
Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EFSTEDNADLF EEN+AKK+  EDKAR+AQLAVPGLVNPHD PEDDMADL
Sbjct:  898 EFSTEDNADLFLEENLAKKQADEDKARQAQLAVPGLVNPHDLPEDDMADL 947          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 9.360e-18
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EFSTEDNADLF EEN+AKK+  +DKAR+AQLAVPGLVNPHD PEDDMADL
Sbjct:  747 EFSTEDNADLFLEENLAKKQADQDKARQAQLAVPGLVNPHDLPEDDMADL 796          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A397DZ39_9STRA (CRM1_C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DZ39_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 4.370e-10
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPE---DDMADL 51
            EF+ EDNADLF EE++A  +E   +   A+LAVPGLVNPH+RP+   DDMADL
Sbjct:   40 EFAGEDNADLFLEESLAMTQERLARETNARLAVPGLVNPHERPDANADDMADL 92          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A835YZ33_9STRA (Exportin1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.280e-9
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EFS E++ +LFYEE  A K  A+    +A+LAVPGLVNPH+RPE+DM DL
Sbjct: 1003 EFSPEESQELFYEETQAYKAAADQALLQARLAVPGLVNPHERPEEDMGDL 1052          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.280e-9
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EFS EDN DLF EEN  +K++ + +A   +LAVPGL+NPH+RP DDMADL
Sbjct:  259 EFSAEDNTDLFNEENQRQKQQNDAQALAQKLAVPGLLNPHERP-DDMADL 307          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A397C6E5_9STRA (CRM1_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C6E5_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.320e-9
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPE---DDMADL 51
            EF+ EDNADLF EE++A  +E   +   A+LAVPGLVNPH+RP+   DDMADL
Sbjct:  676 EFAGEDNADLFLEESLAMTQERLARETNARLAVPGLVNPHERPDANADDMADL 728          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A5D6Y1Y4_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Y4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.560e-8
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EF+ EDNADLF EE++AK +  + +   A+LAVPGLVNPH+RP D+MADL
Sbjct: 1037 EFAGEDNADLFLEESLAKTQLQQQQELSARLAVPGLVNPHERP-DEMADL 1085          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A2P4XH91_9STRA (CRM1 C terminal Exportin 1-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XH91_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.620e-8
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EF+ EDNA+LF EEN+A+ +  E +   A+LAVPGLVNP++RP DDMADL
Sbjct:   84 EFAGEDNAELFLEENLARTQLQEKQDMAAKLAVPGLVNPNERP-DDMADL 132          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: A0A7R9LI94_9ACAR (Hypothetical protein n=2 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LI94_9ACAR)

HSP 1 Score: 56.2 bits (134), Expect = 7.470e-8
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMAD 50
            EF+ EDN DLF EE  A  R+ ED+ RR QL+VPG++NPH+ PE+ MAD
Sbjct: 1242 EFAGEDNNDLFLEEREASLRQKEDEKRRIQLSVPGIINPHEMPEE-MAD 1289          
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Match: M4BY55_HYAAE (Importin N-terminal domain-containing protein n=27 Tax=Oomycota TaxID=4762 RepID=M4BY55_HYAAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.910e-7
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    2 EFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMADL 51
            EF+ EDNA+LF EEN+A+ +  E +   A+LAVPGLVNP++RP D+MADL
Sbjct:  958 EFAGEDNAELFLEENLARTQLQEKQDLAAKLAVPGLVNPNERP-DEMADL 1006          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1175.1107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJK2_9PHAE3.670e-1886.00CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LS67_ECTSI9.360e-1884.00CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A397DZ39_9STRA4.370e-1060.38CRM1_C domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A835YZ33_9STRA1.280e-960.00Exportin1 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A6U1LIT5_9STRA5.280e-962.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A397C6E5_9STRA8.320e-960.38CRM1_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A5D6Y1Y4_9STRA1.560e-862.00Importin N-terminal domain-containing protein n=1 ... [more]
A0A2P4XH91_9STRA1.620e-862.00CRM1 C terminal Exportin 1-like protein (Fragment)... [more]
A0A7R9LI94_9ACAR7.470e-859.18Hypothetical protein n=2 Tax=Oppiella nova TaxID=3... [more]
M4BY55_HYAAE1.910e-760.00Importin N-terminal domain-containing protein n=27... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..45
e-value: 7.4E-6
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1175contigS-dermatodea_contig1175:21278..21433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1175.1107.1mRNA_S-dermatodea_contig1175.1107.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1175 21278..21433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1175.1107.1 ID=prot_S-dermatodea_contig1175.1107.1|Name=mRNA_S-dermatodea_contig1175.1107.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=52bp
QEFSTEDNADLFYEENMAKKREAEDKARRAQLAVPGLVNPHDRPEDDMAD
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like