prot_S-dermatodea_contig1172.1096.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1172.1096.1
Unique Nameprot_S-dermatodea_contig1172.1096.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length101
Homology
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BLAST of mRNA_S-dermatodea_contig1172.1096.1 vs. uniprot
Match: D7FLU9_ECTSI (C6 transcription factor Prf n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 6.220e-6
Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = 0 
Query:    2 GDKALEQSLGAVLQWMVYTNRVAIPELQEQEQPMANSAEEAGESFVSPTHTELPLTARDSAALSRRFLSEWRREGYPGRAPP 83
            G+  L+++LGA+L+WM+ TNRV +P+      P A S E AG                  +ALS RFL EW   G PGR  P
Sbjct:    3 GNSGLQRNLGALLEWMISTNRVTVPD------PPAMS-EAAGAXXXXXXXXXXXXXXXXXSALSARFLKEWEAAGCPGRPSP 77
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BLAST of mRNA_S-dermatodea_contig1172.1096.1 vs. uniprot
Match: A0A6H5L817_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L817_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.850e-5
Identity = 29/82 (35.37%), Postives = 40/82 (48.78%), Query Frame = 0 
Query:    2 GDKALEQSLGAVLQWMVYTNRVAIPELQEQEQPMANSAEEAGESFVSPTHTELPLTARDSAALSRRFLSEWRREGYPGRAPP 83
            G+  L+ +LGA+LQWM+ TNRV +P+L         +  E   +  +             +ALS RFL EW   G PGR  P
Sbjct:    3 GNGGLQGNLGALLQWMISTNRVTVPDLP--------AVSEGAGAAATXXXXXXXXXXXXXSALSARFLKEWEAAGCPGRPSP 76
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1172.1096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLU9_ECTSI6.220e-639.02C6 transcription factor Prf n=1 Tax=Ectocarpus sil... [more]
A0A6H5L817_9PHAE1.850e-535.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1172contigS-dermatodea_contig1172:8280..10079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1172.1096.1mRNA_S-dermatodea_contig1172.1096.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1172 8273..10079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1172.1096.1 ID=prot_S-dermatodea_contig1172.1096.1|Name=mRNA_S-dermatodea_contig1172.1096.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp
MGDKALEQSLGAVLQWMVYTNRVAIPELQEQEQPMANSAEEAGESFVSPT
HTELPLTARDSAALSRRFLSEWRREGYPGRAPPPLPHEQRSPTVPAKRPA
G
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