prot_S-dermatodea_contig11713.1094.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11713.1094.1
Unique Nameprot_S-dermatodea_contig11713.1094.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length519
Homology
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BLAST of mRNA_S-dermatodea_contig11713.1094.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 429 bits (1103), Expect = 5.110e-137
Identity = 312/559 (55.81%), Postives = 349/559 (62.43%), Query Frame = 0 
Query:    1 MTSAGSFVYG---SDGRRKTSTDEQDIADFLSSIENDIAGAEAAGGARAAAPEGISLRGGGTSPGM--DLLFGPASPSTQGAEYGSDRA--LLLGDSEEGIDAAPGDWLRDLESSSTEHRG--DSSASLGV--------DQQATSRDDXXXXXXXXXXXXXXXXXXXXXXXXXXVLGAEPEILDVA--GYDXXXXXXXXXXXSYLHGSRHDMREQHAPSSRHDAR----RSSAATANVDPFAGGRKARPGATQSPTTGMNEVASADEPLDWPGTLDMLGMAADGQKAGSSSSTAPAVPASELPSMAPPAAREESFPDFVEIRDPRRVSQFPKPDNVLAAKAA-GRQGSGDAGAGP--------------GQRQVLAAPLRTVEVYLRPDVTWESVSDVYMAVMLSRGLVVRQQTEKSVTAEKAADGSGDWGTVKLTAGVTRDKLRTLVMQFYADTR--APILSLAGTMARFSGRAGDELYTAIRDALVERRMPLSMLATDAAEVSLDPHYIRDLVGMYAHENVVNLTRYALPLEEFVRGEEERSARLEATLLPQYRATG 519
            M SAGSFV+G   S+ R + S +EQDIADF+SSI++      A+GG+   +     LRGG +S G   D+  G  SP       G+  A  LL  D +   DA P DWL D E      +G  DSSA+             Q      XXXXXXXXXXXX              VLG EP+ILD    GY            +   G R      + P+S  DA     R  A  A V   AGG     G+  + +T  +E+     PLDW GTLDM+GMA + +     +S     P SELPS+ PPAARE  FPDFVEIRDPR VSQFPKPDN L AKAA G  G G AG G               GQR VL APLRTVEVYLRPDVTWESVSDVYM VMLSRGLVVR QTEK VTAEK+AD  GDW TVKLT GVTRDKLRTLV+QFYADTR  APILSLAGT+ARFSGR GD+LYTAIR+ LVER+MPLS LATDA EVSLDPHY+RDLVGMYAHENVVNLTRYALPLEEFVR EEER ARLEATLLPQYRA G
Sbjct:    1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDD-----TASGGSTTTSV----LRGGRSSVGKGGDIFLGSLSPPALQQVTGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNETGEVLGEEPQILDNVDEGYGSGAAAAGMLMSA---GGRMVSWAANTPASLVDAATGAFRGDAHHA-VSRNAGGDLGN-GSAAAASTDADEL-----PLDWQGTLDMVGMA-EAETDTKGTSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGGGDGQAGQGAXESGEHAAAAGQERGQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACG 539
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11713.1094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI5.110e-13755.81GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11713contigS-dermatodea_contig11713:2015..6090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11713.1094.1mRNA_S-dermatodea_contig11713.1094.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11713 2015..6090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11713.1094.1 ID=prot_S-dermatodea_contig11713.1094.1|Name=mRNA_S-dermatodea_contig11713.1094.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=519bp
MTSAGSFVYGSDGRRKTSTDEQDIADFLSSIENDIAGAEAAGGARAAAPE
GISLRGGGTSPGMDLLFGPASPSTQGAEYGSDRALLLGDSEEGIDAAPGD
WLRDLESSSTEHRGDSSASLGVDQQATSRDDGGQPHQQQQKQQQQQRQRR
VEEEEEEVLGAEPEILDVAGYDDDDHHAGSSSSSYLHGSRHDMREQHAPS
SRHDARRSSAATANVDPFAGGRKARPGATQSPTTGMNEVASADEPLDWPG
TLDMLGMAADGQKAGSSSSTAPAVPASELPSMAPPAAREESFPDFVEIRD
PRRVSQFPKPDNVLAAKAAGRQGSGDAGAGPGQRQVLAAPLRTVEVYLRP
DVTWESVSDVYMAVMLSRGLVVRQQTEKSVTAEKAADGSGDWGTVKLTAG
VTRDKLRTLVMQFYADTRAPILSLAGTMARFSGRAGDELYTAIRDALVER
RMPLSMLATDAAEVSLDPHYIRDLVGMYAHENVVNLTRYALPLEEFVRGE
EERSARLEATLLPQYRATG
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