prot_S-dermatodea_contig1169.1074.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1169.1074.1
Unique Nameprot_S-dermatodea_contig1169.1074.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length228
Homology
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BLAST of mRNA_S-dermatodea_contig1169.1074.1 vs. uniprot
Match: A0A6H5KQ23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ23_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.960e-35
Identity = 101/227 (44.49%), Postives = 119/227 (52.42%), Query Frame = 0 
Query:    1 MFKRRSSKDLSAKIGYDHVNAKPSKKLDPAAQQA---ASSSTAAPVANVTLHSHQPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISASNGESPLASLKALPPQGGGPSTSSQLVPSALSSRPPASRSATSGSVSKHAVPAEPPAKSLVIGEGVLFEGTTEGCAAAVVGGRMKGTVKSRRLEITRAGKMEGTGIAETAEIAGLFEGNLTVTKALKV 224
            MF+RRSSK+LSAKIGYDHVN K SK    ++  +   A+S+  APVA++       H                                        SA+   SPLA+LK LPP                                     AEPP+ SLVIGEGVLFEG TEGCAAAVVGG++ GTVKS+RLE+TRAGKMEGT + E AEIAG FEGNLTVTKALK+
Sbjct:    1 MFRRRSSKELSAKIGYDHVNGKASKNTSVSSMSSSTPAASNAVAPVASIPPPGGHLHHKQGSCSPGSSSSRKTTGMPSPEADSGVDP----------SATERPSPLAALKPLPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--AEPPSNSLVIGEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKMEGTAVVEMAEIAGAFEGNLTVTKALKI 215
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BLAST of mRNA_S-dermatodea_contig1169.1074.1 vs. uniprot
Match: A0A2E3XDE6_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XDE6_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 2.030e-7
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:  156 LVIGEGVLFEGTTEGCAAAVVGGRMKGTVKSRRLEITRAGKMEGTGIAETAEIAGLFEGNLTVTKALKV 224
            + IG G+  +G    CA  V+ G ++GTV+ ++LEI   G  +GT   ETAEI G+F+G+L V+  LK+
Sbjct:   41 MTIGPGIEMKGEISKCAVLVIEGEVEGTVQCQQLEILSRGVFKGTAQVETAEIEGIFDGDLNVSGLLKI 109
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1169.1074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQ23_9PHAE1.960e-3544.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2E3XDE6_9PROT2.030e-742.03Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 157..224
e-value: 1.7E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1169contigS-dermatodea_contig1169:3584..4330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1169.1074.1mRNA_S-dermatodea_contig1169.1074.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1169 3584..4330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1169.1074.1 ID=prot_S-dermatodea_contig1169.1074.1|Name=mRNA_S-dermatodea_contig1169.1074.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=228bp
MFKRRSSKDLSAKIGYDHVNAKPSKKLDPAAQQAASSSTAAPVANVTLHS
HQPHSSSSSSSSSSRKTTATTSPDQRGPGAGGGNEHHQGGGSSISASNGE
SPLASLKALPPQGGGPSTSSQLVPSALSSRPPASRSATSGSVSKHAVPAE
PPAKSLVIGEGVLFEGTTEGCAAAVVGGRMKGTVKSRRLEITRAGKMEGT
GIAETAEIAGLFEGNLTVTKALKVSFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B