prot_S-dermatodea_contig11556.995.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11556.995.1
Unique Nameprot_S-dermatodea_contig11556.995.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length111
Homology
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: D7G1Y6_ECTSI (Polyketide Synthase III n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y6_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.060e-68
Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0
Query:    1 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVN+AILHAIFGDGCAVAVV G TARNA+PGSLAVLDNRSWLV
Sbjct:   66 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 176          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A6H5L6U2_9PHAE (PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U2_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 8.670e-67
Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 0
Query:    1 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVN+AILHAIFGDGCAVAVV G TARNA+PGSLAVLDNRSWLV
Sbjct:  207 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 317          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.610e-30
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKP-GSLAVLDNRSWLV 111
            GPGLD  L+K++GL  SV+R ++ F GC A +NG R+A+ YA +HPG+LAL+V VE+ S+H    D VN+AILHAIF DGCA AV+ G    +AK  G   ++D   WL+
Sbjct:  170 GPGLDCSLIKTLGLERSVDRSLIGFMGCAAAMNGFRVANDYAASHPGKLALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAKAKGKFGIVDTHGWLM 279          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK)

HSP 1 Score: 120 bits (300), Expect = 4.590e-30
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            GPGLD EL+KS+GL+  V+R ++ F GC A +NG R+ + Y   +PG+LALL  VEL S H    +  N++ILHAIFGDG A AV+ G T   A PG+LA++D+ +WL+
Sbjct:  164 GPGLDCELIKSLGLSRGVDRSLIGFMGCAAAMNGFRVCNDYVKANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAAPGALAIVDDHAWLM 272          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 4.780e-30
Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            GPGLD EL+K++GL  SV+R ++ F GC A +NG R A+ Y   +PG+ AL++ VEL S+H    D +N+AILHAIF DGCA AV+ G        G+LA++DN +WL+
Sbjct:  167 GPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDYVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGARKSECPKGTLAIVDNHAWLM 275          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN)

HSP 1 Score: 117 bits (292), Expect = 1.010e-29
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLA------VLDNRSWLV 111
            GPGLD EL+K++GL   V+R ++ F GC A +NG R+A+ +A++HPG++AL+V VE+ S+H    D VN+AILHAIF DGCA AV+ G      KPGS A      ++D   WL+
Sbjct:   49 GPGLDAELIKTLGLWRGVDRSLIGFMGCAAAMNGFRVANDFAMSHPGKMALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISG-----EKPGSAAAKGKFGIVDTHGWLM 158          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 6.440e-28
Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            GPGLD E++K + +  SV+R ++ F GC A +NG R+A+ Y   HPG+ AL++ VEL S+H    D +N+AILHAIF DGCA  V+ G TA +A  G+LA++D+ + L+
Sbjct:  175 GPGLDCEIIKRLRMKRSVDRSLIGFMGCAAAMNGFRIANDYVRCHPGKFALMLCVELSSVHTTFEDNINDAILHAIFADGCAACVLSGETASSAAKGTLAIVDDHAELM 283          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.070e-27
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            GPGLD EL+  +GL  SV+R ++ F GC A +NG R+A+ Y   + G+ ALLV VE+ S+H    D +N++ILHAIF DGCA AV+ G T  +   G+LA++D+ +WL+
Sbjct:  206 GPGLDCELINQLGLARSVDRSLIGFMGCAAAMNGFRIANDYCKANAGKYALLVCVEISSVHTTFDDDINDSILHAIFADGCAAAVLSGETKDSIPKGTLAIVDDHAWLM 314          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.030e-27
Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLT--ARNAKPGSLAVLDNRSWLV 111
            GPGLD EL+K++GL+ SV+R ++ F GC A +NG R+A+ YAV +PG+LAL+  VE+ S+H    D VN+AILHAIF DGCA AV+ G    A  AK G   ++D  + L+
Sbjct:  165 GPGLDCELIKTLGLSRSVDRSLIGFMGCAAAMNGFRVANDYAVANPGKLALMCCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGAPRAK-GKFGIIDTHACLM 274          
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.070e-27
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    3 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 111
            GPGLD  +++ IGL+  V+R ++ F GC A +NG R+   Y  +H  + AL+  VEL S+H    D +N+AILHAIFGDGCA AV+GG TA+ A  G  A++D+ +WL+
Sbjct:  199 GPGLDCHIIQEIGLSRGVDRALIGFMGCAAAMNGFRVGMDYVRSHD-KAALVCCVELSSVHTTFDDNINDAILHAIFGDGCAAAVLGGRTAKTAPKGGFAIVDDHAWLM 306          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Y6_ECTSI2.060e-6896.40Polyketide Synthase III n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6U2_9PHAE8.670e-6796.40PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/3... [more]
A0A8J2SDG4_9STRA3.610e-3050.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6V1RDH2_HETAK4.590e-3050.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LJ35_ECTSI4.780e-3049.54Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID... [more]
F0Y6J5_AURAN1.010e-2948.70Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CMD8_9STRA6.440e-2847.71Polyketide synthase III n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1U6_9STRA1.070e-2747.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3NPW3_9STRA5.030e-2750.45Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2WPY4_9STRA5.070e-2747.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 1..96
e-value: 5.9E-27
score: 96.6
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 3..90
IPR001099Chalcone/stilbene synthase, N-terminalPFAMPF00195Chal_sti_synt_Ncoord: 4..89
e-value: 3.1E-12
score: 46.4
NoneNo IPR availablePANTHERPTHR11877:SF10TYPE III POLYKETIDE SYNTHASE Bcoord: 4..90
IPR011141Polyketide synthase, type IIIPANTHERPTHR11877HYDROXYMETHYLGLUTARYL-COA SYNTHASEcoord: 4..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11556contigS-dermatodea_contig11556:339..4113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11556.995.1mRNA_S-dermatodea_contig11556.995.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11556 339..4113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11556.995.1 ID=prot_S-dermatodea_contig11556.995.1|Name=mRNA_S-dermatodea_contig11556.995.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=111bp
VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGR
LALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGS
LAVLDNRSWLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR001099Chalcone/stilbene_synthase_N
IPR011141Polyketide_synthase_type-III