mRNA_S-dermatodea_contig11556.995.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: D7G1Y6_ECTSI (Polyketide Synthase III n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Y6_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.060e-68 Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 1
Query: 1 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVN+AILHAIFGDGCAVAVV G TARNA+PGSLAVLDNRSWLV
Sbjct: 66 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 176
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A6H5L6U2_9PHAE (PKS III protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U2_9PHAE) HSP 1 Score: 217 bits (552), Expect = 8.670e-67 Identity = 107/111 (96.40%), Postives = 109/111 (98.20%), Query Frame = 1
Query: 1 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVN+AILHAIFGDGCAVAVV G TARNA+PGSLAVLDNRSWLV
Sbjct: 207 VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNDAILHAIFGDGCAVAVVAGRTARNAEPGSLAVLDNRSWLV 317
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.610e-30 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKP-GSLAVLDNRSWLV 333
GPGLD L+K++GL SV+R ++ F GC A +NG R+A+ YA +HPG+LAL+V VE+ S+H D VN+AILHAIF DGCA AV+ G +AK G ++D WL+
Sbjct: 170 GPGLDCSLIKTLGLERSVDRSLIGFMGCAAAMNGFRVANDYAASHPGKLALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGSAKAKGKFGIVDTHGWLM 279
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK) HSP 1 Score: 120 bits (300), Expect = 4.590e-30 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
GPGLD EL+KS+GL+ V+R ++ F GC A +NG R+ + Y +PG+LALL VEL S H + N++ILHAIFGDG A AV+ G T A PG+LA++D+ +WL+
Sbjct: 164 GPGLDCELIKSLGLSRGVDRSLIGFMGCAAAMNGFRVCNDYVKANPGKLALLCCVELSSPHTTFNNDTNDSILHAIFGDGAAAAVISGETKETAAPGALAIVDDHAWLM 272
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI) HSP 1 Score: 120 bits (300), Expect = 4.780e-30 Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
GPGLD EL+K++GL SV+R ++ F GC A +NG R A+ Y +PG+ AL++ VEL S+H D +N+AILHAIF DGCA AV+ G G+LA++DN +WL+
Sbjct: 167 GPGLDCELIKNLGLTRSVDRTLIGFMGCAAAMNGFRNANDYVTANPGKYALMICVELSSVHTTFDDNINDAILHAIFADGCAAAVLKGARKSECPKGTLAIVDNHAWLM 275
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN) HSP 1 Score: 117 bits (292), Expect = 1.010e-29 Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLA------VLDNRSWLV 333
GPGLD EL+K++GL V+R ++ F GC A +NG R+A+ +A++HPG++AL+V VE+ S+H D VN+AILHAIF DGCA AV+ G KPGS A ++D WL+
Sbjct: 49 GPGLDAELIKTLGLWRGVDRSLIGFMGCAAAMNGFRVANDFAMSHPGKMALMVCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISG-----EKPGSAAAKGKFGIVDTHGWLM 158
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA) HSP 1 Score: 114 bits (286), Expect = 6.440e-28 Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
GPGLD E++K + + SV+R ++ F GC A +NG R+A+ Y HPG+ AL++ VEL S+H D +N+AILHAIF DGCA V+ G TA +A G+LA++D+ + L+
Sbjct: 175 GPGLDCEIIKRLRMKRSVDRSLIGFMGCAAAMNGFRIANDYVRCHPGKFALMLCVELSSVHTTFEDNINDAILHAIFADGCAACVLSGETASSAAKGTLAIVDDHAELM 283
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.070e-27 Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
GPGLD EL+ +GL SV+R ++ F GC A +NG R+A+ Y + G+ ALLV VE+ S+H D +N++ILHAIF DGCA AV+ G T + G+LA++D+ +WL+
Sbjct: 206 GPGLDCELINQLGLARSVDRSLIGFMGCAAAMNGFRIANDYCKANAGKYALLVCVEISSVHTTFDDDINDSILHAIFADGCAAAVLSGETKDSIPKGTLAIVDDHAWLM 314
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S3NPW3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPW3_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.030e-27 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLT--ARNAKPGSLAVLDNRSWLV 333
GPGLD EL+K++GL+ SV+R ++ F GC A +NG R+A+ YAV +PG+LAL+ VE+ S+H D VN+AILHAIF DGCA AV+ G A AK G ++D + L+
Sbjct: 165 GPGLDCELIKTLGLSRSVDRSLIGFMGCAAAMNGFRVANDYAVANPGKLALMCCVEISSVHTTFDDNVNDAILHAIFADGCAAAVISGEKPGAPRAK-GKFGIIDTHACLM 274
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.070e-27 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 7 GPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRLALLVSVELPSLHMHKGDTVNEAILHAIFGDGCAVAVVGGLTARNAKPGSLAVLDNRSWLV 333
GPGLD +++ IGL+ V+R ++ F GC A +NG R+ Y +H + AL+ VEL S+H D +N+AILHAIFGDGCA AV+GG TA+ A G A++D+ +WL+
Sbjct: 199 GPGLDCHIIQEIGLSRGVDRALIGFMGCAAAMNGFRVGMDYVRSHD-KAALVCCVELSSVHTTFDDNINDAILHAIFGDGCAAAVLGGRTAKTAPKGGFAIVDDHAWLM 306 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11556.995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11556.995.1 >prot_S-dermatodea_contig11556.995.1 ID=prot_S-dermatodea_contig11556.995.1|Name=mRNA_S-dermatodea_contig11556.995.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=111bp VCGPGLDGELVKSIGLNHSVEREVVSFQGCGAGINGLRLASQYAVTHPGRback to top mRNA from alignment at S-dermatodea_contig11556:339..4113+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11556.995.1 ID=mRNA_S-dermatodea_contig11556.995.1|Name=mRNA_S-dermatodea_contig11556.995.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3775bp|location=Sequence derived from alignment at S-dermatodea_contig11556:339..4113+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11556:339..4113+ >mRNA_S-dermatodea_contig11556.995.1 ID=mRNA_S-dermatodea_contig11556.995.1|Name=mRNA_S-dermatodea_contig11556.995.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at S-dermatodea_contig11556:339..4113+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |