prot_S-dermatodea_contig11529.984.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11529.984.1
Unique Nameprot_S-dermatodea_contig11529.984.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length247
Homology
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BLAST of mRNA_S-dermatodea_contig11529.984.1 vs. uniprot
Match: D8LN23_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN23_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.900e-8
Identity = 41/75 (54.67%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:  171 PTGRNSQSIGGMTAPDCSHDSDRESFVSRVGSYALTDIGVGASERPGGAPGTTLVTGNGXXXXGTYSPTSTVLRS 245
            P+GRNSQS+GGMTA   S     ESFVSR GSYALTDIGVG S++     G       G    G  SPTST++RS
Sbjct:  185 PSGRNSQSMGGMTAE--SDGDGGESFVSRAGSYALTDIGVGHSDQ---GRGNQAGKAGGDSGAGALSPTSTLMRS 254
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BLAST of mRNA_S-dermatodea_contig11529.984.1 vs. uniprot
Match: A0A6H5KYE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYE0_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.440e-8
Identity = 40/75 (53.33%), Postives = 46/75 (61.33%), Query Frame = 0 
Query:  171 PTGRNSQSIGGMTAPDCSHDSDRESFVSRVGSYALTDIGVGASERPGGAPGTTLVTGNGXXXXGTYSPTSTVLRS 245
            P+GRNSQS+GGMTA   S     ESFVSR GSYALTDIGVG S++     G       G    G  SP ST++RS
Sbjct:  177 PSGRNSQSMGGMTAE--SDGDGGESFVSRAGSYALTDIGVGHSDQ---GRGDQAGKAGGASGAGALSPASTIMRS 246
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11529.984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN23_ECTSI1.900e-854.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KYE0_9PHAE6.440e-853.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11529contigS-dermatodea_contig11529:1088..3965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11529.984.1mRNA_S-dermatodea_contig11529.984.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11529 1087..3965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11529.984.1 ID=prot_S-dermatodea_contig11529.984.1|Name=mRNA_S-dermatodea_contig11529.984.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=247bp
PLGSAEVAAAATASGGNDRGEATLGRPSLDSAAESVGVSSVAVHPRRGGD
GGAKGETRNLLHEGTMAAGRSGRGVGGGDVEGYGNRASNKELDAAIGAAG
GGLRVVHDDDAASHYTGSSVAAGRCGLGRGMDKRHESSFVGGEEDSCLGS
VGPVPGELFPPRFGAMAAVVPTGRNSQSIGGMTAPDCSHDSDRESFVSRV
GSYALTDIGVGASERPGGAPGTTLVTGNGGGGGGTYSPTSTVLRSAT
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