prot_S-dermatodea_contig11481.962.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11481.962.1
Unique Nameprot_S-dermatodea_contig11481.962.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length124
Homology
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BLAST of mRNA_S-dermatodea_contig11481.962.1 vs. uniprot
Match: D7FNW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW1_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.220e-16
Identity = 60/128 (46.88%), Postives = 69/128 (53.91%), Query Frame = 0 
Query:    1 MCDDLGKLPGYDDLEPKRKGLRRLRKAERALLQNIQHNQPSPLAAGGGQNQPTGKANQAFATSAAESTENSEAIPATT--RGEGRQWKRRRWKTAGLSDLTRVLLAAGT---AAAAAGEATANFETVL 123
            M DDLGKLPG DDLEPKR+GLRRLRKAER  L+                                        +P+ T  RG+GRQW+RRRW+T GLSDLTRV+LAAGT   A A    AT +F  VL
Sbjct: 1830 MVDDLGKLPGDDDLEPKRRGLRRLRKAERTFLKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG---LPSRTDMRGKGRQWERRRWRTIGLSDLTRVILAAGTTTEATAGMASATESFRAVL 1954
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BLAST of mRNA_S-dermatodea_contig11481.962.1 vs. uniprot
Match: A0A6H5KI97_9PHAE (DUF4456 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI97_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.250e-14
Identity = 58/128 (45.31%), Postives = 66/128 (51.56%), Query Frame = 0 
Query:    1 MCDDLGKLPGYDDLEPKRKGLRRLRKAERALLQNIQHNQPSPLAAGGGQNQPTGKANQAFATSAAESTENSEAIPATT--RGEGRQWKRRRWKTAGLSDLTRVLLAAGTAAAAAG---EATANFETVL 123
            M DDLG LPG D LEPKR+GLRRLRKAER  L+                                        +P+ T  RG+GRQW+RRRW+T GLSDLTRV+LAAGT   A G    AT  F  VL
Sbjct:  430 MVDDLGNLPGDDGLEPKRRGLRRLRKAERTFLKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXDGGLPSRTEMRGKGRQWERRRWRTIGLSDLTRVMLAAGTTTEATGGMESATGKFRAVL 554
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11481.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNW1_ECTSI8.220e-1646.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI97_9PHAE1.250e-1445.31DUF4456 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11481contigS-dermatodea_contig11481:388..759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11481.962.1mRNA_S-dermatodea_contig11481.962.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11481 365..759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11481.962.1 ID=prot_S-dermatodea_contig11481.962.1|Name=mRNA_S-dermatodea_contig11481.962.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=124bp
MCDDLGKLPGYDDLEPKRKGLRRLRKAERALLQNIQHNQPSPLAAGGGQN
QPTGKANQAFATSAAESTENSEAIPATTRGEGRQWKRRRWKTAGLSDLTR
VLLAAGTAAAAAGEATANFETVLK
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