prot_S-dermatodea_contig1147.954.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1147.954.1
Unique Nameprot_S-dermatodea_contig1147.954.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length109
Homology
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BLAST of mRNA_S-dermatodea_contig1147.954.1 vs. uniprot
Match: D7FP21_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP21_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 4.110e-30
Identity = 68/104 (65.38%), Postives = 74/104 (71.15%), Query Frame = 0 
Query:    6 MQVLAACVMSQCKRAQADGGGEGLDPAPLSQEWVEVFDFLGPYVFEALCDPECVPLALGVLRRFLHGSQLRDATMREGGFAAATQKLFSLERTGDKRCQRQVEE 109
            MQVLAACV SQC R     G  GLD APL QEWVEVF+ LG  VFEAL DPE V LAL VLR FLHGSQLRDA +REGGF  A Q ++S E  GDK+C   VE+
Sbjct:  655 MQVLAACVASQCNRE----GDAGLDQAPLGQEWVEVFERLGHRVFEALFDPEGVALALRVLRSFLHGSQLRDAALREGGFVGALQAMYSSE-AGDKKCAVAVEQ 753
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1147.954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FP21_ECTSI4.110e-3065.38Calponin-homology (CH) domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1147contigS-dermatodea_contig1147:8783..11259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1147.954.1mRNA_S-dermatodea_contig1147.954.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1147 8774..11259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1147.954.1 ID=prot_S-dermatodea_contig1147.954.1|Name=mRNA_S-dermatodea_contig1147.954.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=109bp
MEVSNMQVLAACVMSQCKRAQADGGGEGLDPAPLSQEWVEVFDFLGPYVF
EALCDPECVPLALGVLRRFLHGSQLRDATMREGGFAAATQKLFSLERTGD
KRCQRQVEE
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