prot_S-dermatodea_contig11466.952.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11466.952.1
Unique Nameprot_S-dermatodea_contig11466.952.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length201
Homology
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BLAST of mRNA_S-dermatodea_contig11466.952.1 vs. uniprot
Match: D7FIC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC2_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 7.220e-29
Identity = 75/120 (62.50%), Postives = 84/120 (70.00%), Query Frame = 0 
Query:   82 GLELPSDLLLKVKSGGLQRMEADALAARRAEEDARDAESAASADAGRL-SRRKAADAPRSDNFRLVVLDGDDGEAADSADGKAQASENANKFLRQRVDRQKRVSHNLFKARKRLGPSPDF 200
            GLELPSDLLL+VKSGGLQRMEAD L    AEE A           GR  +R KA DA RSDNFRLVVLD DDG      + KA A+E+A  FLR R+  +KRVSH+LFKARKRLGPSP+F
Sbjct:  100 GLELPSDLLLRVKSGGLQRMEADVL---EAEEQAXXXXXXXXXXXGRRKARAKAGDASRSDNFRLVVLDEDDGGVDADDESKAHAAESAKNFLRDRMGSRKRVSHSLFKARKRLGPSPNF 216
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11466.952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIC2_ECTSI7.220e-2962.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11466contigS-dermatodea_contig11466:2754..4097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11466.952.1mRNA_S-dermatodea_contig11466.952.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11466 1408..4097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11466.952.1 ID=prot_S-dermatodea_contig11466.952.1|Name=mRNA_S-dermatodea_contig11466.952.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=201bp
DATDEEQSSDDEAPEEVSAAAATALAGRRRKAEQQARQAAPAAKRKRART
SKGGRLASGEEEQEAGLGVARGEDALPSGGGGLELPSDLLLKVKSGGLQR
MEADALAARRAEEDARDAESAASADAGRLSRRKAADAPRSDNFRLVVLDG
DDGEAADSADGKAQASENANKFLRQRVDRQKRVSHNLFKARKRLGPSPDF
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